RNA–Protein interactions for RNA: ENST00000454043.1

LINC00299-204, long intergenic non-protein coding RNA 299, humanhuman

TSL 4

Gene LINC00299, Length 591 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00299-204ENST00000454043 GCC1Q96CN9 775 aa9.54□□□□□ -0.88
LINC00299-204ENST00000454043 SIPA1L3O60292 1781 aaPredicted RBP9.54□□□□□ -0.88
LINC00299-204ENST00000454043 PXDNLA1KZ92 1463 aa9.53□□□□□ -0.88
LINC00299-204ENST00000454043 LRP6O75581 1613 aa9.53□□□□□ -0.88
LINC00299-204ENST00000454043 F6X3S4 739 aa9.53□□□□□ -0.88
LINC00299-204ENST00000454043 SLURP2P0DP57 97 aa9.53□□□□□ -0.88
LINC00299-204ENST00000454043 GTF2E1P29083 439 aaPredicted RBP9.53□□□□□ -0.88
LINC00299-204ENST00000454043 GNASQ5JWF2 1037 aa9.53□□□□□ -0.88
LINC00299-204ENST00000454043 MARCH10Q8NA82 808 aaPredicted RBP9.53□□□□□ -0.88
LINC00299-204ENST00000454043 SLC4A9Q96Q91 983 aa9.53□□□□□ -0.88
LINC00299-204ENST00000454043 PHAXQ9H814 394 aaKnown RBP9.53□□□□□ -0.88
LINC00299-204ENST00000454043 ATG3Q9NT62 314 aa9.53□□□□□ -0.88
LINC00299-204ENST00000454043 USP16Q9Y5T5 823 aa9.53□□□□□ -0.88
LINC00299-204ENST00000454043 BCL9O00512 1426 aa9.53□□□□□ -0.88
LINC00299-204ENST00000454043 IGHDP01880 384 aa9.52□□□□□ -0.89
LINC00299-204ENST00000454043 MYL6BP14649 208 aa9.52□□□□□ -0.89
LINC00299-204ENST00000454043 SMTNP53814 917 aa9.52□□□□□ -0.89
LINC00299-204ENST00000454043 GAS6Q14393 721 aa9.52□□□□□ -0.89
LINC00299-204ENST00000454043 ZNF772Q68DY9 489 aaPredicted RBP9.52□□□□□ -0.89
LINC00299-204ENST00000454043 COPS6Q7L5N1 327 aa9.52□□□□□ -0.89
LINC00299-204ENST00000454043 LINS1Q8NG48 757 aa9.52□□□□□ -0.89
LINC00299-204ENST00000454043 RHBDD1Q8TEB9 315 aa9.52□□□□□ -0.89
LINC00299-204ENST00000454043 QTRT2Q9H974 415 aaKnown RBP9.52□□□□□ -0.89
LINC00299-204ENST00000454043 ASAP1Q9ULH1 1129 aa9.52□□□□□ -0.89
LINC00299-204ENST00000454043 NOD1Q9Y239 953 aa9.52□□□□□ -0.89
LINC00299-204ENST00000454043 MAP3K2Q9Y2U5 619 aa9.52□□□□□ -0.89
LINC00299-204ENST00000454043 IBTKQ9P2D0 1353 aaPredicted RBP9.51□□□□□ -0.89
LINC00299-204ENST00000454043 RGS12O14924 1447 aa9.51□□□□□ -0.89
LINC00299-204ENST00000454043 ATP10DQ9P241 1426 aa9.51□□□□□ -0.89
LINC00299-204ENST00000454043 PRAMEF22A3QJZ6 481 aa9.51□□□□□ -0.89
LINC00299-204ENST00000454043 UBTFL1P0CB47 393 aaPredicted RBP9.51□□□□□ -0.89
LINC00299-204ENST00000454043 AIMP1Q12904 312 aaKnown RBP9.51□□□□□ -0.89
LINC00299-204ENST00000454043 NCOA4Q13772 614 aa9.51□□□□□ -0.89
LINC00299-204ENST00000454043 TLR1Q15399 786 aa9.51□□□□□ -0.89
LINC00299-204ENST00000454043 XAGE3Q8WTP9 111 aa9.51□□□□□ -0.89
LINC00299-204ENST00000454043 VIRMAQ69YN4 1812 aaKnown RBP9.5□□□□□ -0.89
LINC00299-204ENST00000454043 A0A1B0GTH6 734 aa9.5□□□□□ -0.89
LINC00299-204ENST00000454043 ANXA1P04083 346 aa9.5□□□□□ -0.89
LINC00299-204ENST00000454043 MTFR1Q15390 333 aa9.5□□□□□ -0.89
LINC00299-204ENST00000454043 PROSER3Q2NL68 480 aa9.5□□□□□ -0.89
LINC00299-204ENST00000454043 BEND3Q5T5X7 828 aa9.5□□□□□ -0.89
LINC00299-204ENST00000454043 FOXR1Q6PIV2 292 aa9.5□□□□□ -0.89
LINC00299-204ENST00000454043 KIF6Q6ZMV9 814 aa9.5□□□□□ -0.89
LINC00299-204ENST00000454043 TBC1D9Q6ZT07 1266 aa9.5□□□□□ -0.89
LINC00299-204ENST00000454043 SMC5Q8IY18 1101 aa9.5□□□□□ -0.89
LINC00299-204ENST00000454043 DEPDC4Q8N2C3 294 aa9.5□□□□□ -0.89
LINC00299-204ENST00000454043 ANKRD44Q8N8A2 993 aa9.5□□□□□ -0.89
LINC00299-204ENST00000454043 PLBD2Q8NHP8 589 aa9.5□□□□□ -0.89
LINC00299-204ENST00000454043 GTPBP3Q969Y2 492 aaKnown RBP9.5□□□□□ -0.89
LINC00299-204ENST00000454043 C9orf78Q9NZ63 289 aaPredicted RBP9.5□□□□□ -0.89
LINC00299-204ENST00000454043 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.5□□□□□ -0.89
LINC00299-204ENST00000454043 ATRNO75882 1429 aa9.49□□□□□ -0.89
LINC00299-204ENST00000454043 SHANK3Q9BYB0 1731 aa9.49□□□□□ -0.89
LINC00299-204ENST00000454043 A6NJR5 290 aa9.49□□□□□ -0.89
LINC00299-204ENST00000454043 USP17L5A8MUK1 530 aa9.49□□□□□ -0.89
LINC00299-204ENST00000454043 GPR25O00155 361 aa9.49□□□□□ -0.89
LINC00299-204ENST00000454043 THBS1P07996 1170 aa9.49□□□□□ -0.89
LINC00299-204ENST00000454043 SRSF11Q05519 484 aaKnown RBP9.49□□□□□ -0.89
LINC00299-204ENST00000454043 ZNF385CQ66K41 422 aaPredicted RBP9.49□□□□□ -0.89
LINC00299-204ENST00000454043 ACSBG1Q96GR2 724 aa9.49□□□□□ -0.89
LINC00299-204ENST00000454043 UCN2Q96RP3 112 aa9.49□□□□□ -0.89
LINC00299-204ENST00000454043 MEIS3Q99687 375 aa9.49□□□□□ -0.89
LINC00299-204ENST00000454043 METTL22Q9BUU2 404 aaPredicted RBP9.49□□□□□ -0.89
LINC00299-204ENST00000454043 USP44Q9H0E7 712 aa9.49□□□□□ -0.89
LINC00299-204ENST00000454043 NUCKS1Q9H1E3 243 aaKnown RBP9.49□□□□□ -0.89
LINC00299-204ENST00000454043 SERTAD1Q9UHV2 236 aa9.49□□□□□ -0.89
LINC00299-204ENST00000454043 KCPQ6ZWJ8 1503 aa9.48□□□□□ -0.89
LINC00299-204ENST00000454043 WNK3Q9BYP7 1800 aa9.48□□□□□ -0.89
LINC00299-204ENST00000454043 A1BGP04217 495 aa9.48□□□□□ -0.89
LINC00299-204ENST00000454043 MSX1P28360 303 aa9.48□□□□□ -0.89
LINC00299-204ENST00000454043 GTF2IP78347 998 aa9.48□□□□□ -0.89
LINC00299-204ENST00000454043 HSP90AB3PQ58FF7 597 aa9.48□□□□□ -0.89
LINC00299-204ENST00000454043 CEP85Q6P2H3 762 aa9.48□□□□□ -0.89
LINC00299-204ENST00000454043 PLEKHM2Q8IWE5 1019 aa9.48□□□□□ -0.89
LINC00299-204ENST00000454043 DNAJC10Q8IXB1 793 aa9.48□□□□□ -0.89
LINC00299-204ENST00000454043 WHAMMQ8TF30 809 aa9.48□□□□□ -0.89
LINC00299-204ENST00000454043 ADCY9O60503 1353 aa9.48□□□□□ -0.89
LINC00299-204ENST00000454043 LOC102724428A0A0B4J2F2 783 aa9.47□□□□□ -0.89
LINC00299-204ENST00000454043 A6NJY4 79 aa9.47□□□□□ -0.89
LINC00299-204ENST00000454043 GRM8O00222 908 aa9.47□□□□□ -0.89
LINC00299-204ENST00000454043 CDK2AP1O14519 115 aa9.47□□□□□ -0.89
LINC00299-204ENST00000454043 CYP19A1P11511 503 aaPredicted RBP9.47□□□□□ -0.89
LINC00299-204ENST00000454043 IL6STP40189 918 aaPredicted RBP9.47□□□□□ -0.89
LINC00299-204ENST00000454043 SIK1P57059 783 aa9.47□□□□□ -0.89
LINC00299-204ENST00000454043 RBM6P78332 1123 aaKnown RBP9.47□□□□□ -0.89
LINC00299-204ENST00000454043 ATP8B2P98198 1209 aa9.47□□□□□ -0.89
LINC00299-204ENST00000454043 NUCB1Q02818 461 aa9.47□□□□□ -0.89
LINC00299-204ENST00000454043 HSP90AB4PQ58FF6 505 aa9.47□□□□□ -0.89
LINC00299-204ENST00000454043 ZNF295-AS1Q8N0V1 137 aa9.47□□□□□ -0.89
LINC00299-204ENST00000454043 MYD88Q99836 296 aa9.47□□□□□ -0.89
LINC00299-204ENST00000454043 DCTPP1Q9H773 170 aa9.47□□□□□ -0.89
LINC00299-204ENST00000454043 C1orf115Q9H7X2 142 aa9.47□□□□□ -0.89
LINC00299-204ENST00000454043 GPAMQ9HCL2 828 aa9.47□□□□□ -0.89
LINC00299-204ENST00000454043 IQSEC3Q9UPP2 1182 aaPredicted RBP9.47□□□□□ -0.89
LINC00299-204ENST00000454043 PAPPAQ13219 1627 aa9.46□□□□□ -0.89
LINC00299-204ENST00000454043 ATP9BO43861 1147 aa9.46□□□□□ -0.9
LINC00299-204ENST00000454043 UBAP2LQ14157 1087 aaKnown RBP9.46□□□□□ -0.9
LINC00299-204ENST00000454043 FAM196AQ6ZSG2 479 aa9.46□□□□□ -0.9
LINC00299-204ENST00000454043 LRP10Q7Z4F1 713 aa9.46□□□□□ -0.9
LINC00299-204ENST00000454043 CHD1LQ86WJ1 897 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms