RNA–Protein interactions for RNA: ENST00000453091.6

RIF1-206, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 8,053 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-206ENST00000453091 XAGE2Q96GT9 111 aa8.77□□□□□ -1.01
RIF1-206ENST00000453091 PRKG1Q13976 671 aa8.77□□□□□ -1.01
RIF1-206ENST00000453091 TTLL7Q6ZT98 887 aa8.77□□□□□ -1.01
RIF1-206ENST00000453091 KLHL7Q8IXQ5 586 aa8.77□□□□□ -1.01
RIF1-206ENST00000453091 ZNF496Q96IT1 587 aaPredicted RBP8.77□□□□□ -1.01
RIF1-206ENST00000453091 NAA15Q9BXJ9 866 aaKnown RBP8.77□□□□□ -1.01
RIF1-206ENST00000453091 UQCRFS1P1P0C7P4 283 aa8.76□□□□□ -1.01
RIF1-206ENST00000453091 CKAP4Q07065 602 aaKnown RBP8.76□□□□□ -1.01
RIF1-206ENST00000453091 LETM2Q2VYF4 491 aa8.76□□□□□ -1.01
RIF1-206ENST00000453091 DYMQ7RTS9 669 aa8.76□□□□□ -1.01
RIF1-206ENST00000453091 ESR2Q92731 530 aa8.76□□□□□ -1.01
RIF1-206ENST00000453091 EEF2KMTQ96G04 330 aa8.76□□□□□ -1.01
RIF1-206ENST00000453091 FEZ1Q99689 392 aa8.76□□□□□ -1.01
RIF1-206ENST00000453091 UTP14CQ5TAP6 766 aaKnown RBP8.76□□□□□ -1.01
RIF1-206ENST00000453091 VPS36Q86VN1 386 aa8.76□□□□□ -1.01
RIF1-206ENST00000453091 ZNF526Q8TF50 670 aaPredicted RBP8.76□□□□□ -1.01
RIF1-206ENST00000453091 UBLCP1Q8WVY7 318 aaPredicted RBP8.76□□□□□ -1.01
RIF1-206ENST00000453091 ELP1O95163 1332 aa8.76□□□□□ -1.01
RIF1-206ENST00000453091 SORBS3O60504 671 aa8.76□□□□□ -1.01
RIF1-206ENST00000453091 PDE4BQ07343 736 aa8.76□□□□□ -1.01
RIF1-206ENST00000453091 FAM98CQ17RN3 349 aaKnown RBP8.76□□□□□ -1.01
RIF1-206ENST00000453091 ZNF790Q6PG37 636 aa8.76□□□□□ -1.01
RIF1-206ENST00000453091 NFE2L3Q9Y4A8 694 aa8.76□□□□□ -1.01
RIF1-206ENST00000453091 CUL7Q14999 1698 aa8.76□□□□□ -1.01
RIF1-206ENST00000453091 NUP160Q12769 1436 aa8.76□□□□□ -1.01
RIF1-206ENST00000453091 ZNF500O60304 480 aaPredicted RBP8.76□□□□□ -1.01
RIF1-206ENST00000453091 FGFR1OPO95684 399 aaKnown RBP8.76□□□□□ -1.01
RIF1-206ENST00000453091 FAM47AQ5JRC9 791 aa8.76□□□□□ -1.01
RIF1-206ENST00000453091 FAM114A1Q8IWE2 563 aa8.76□□□□□ -1.01
RIF1-206ENST00000453091 CTAGE1Q96RT6 745 aa8.76□□□□□ -1.01
RIF1-206ENST00000453091 RASSF4Q9H2L5 321 aa8.76□□□□□ -1.01
RIF1-206ENST00000453091 TTC21AQ8NDW8 1320 aa8.76□□□□□ -1.01
RIF1-206ENST00000453091 GNPATO15228 680 aa8.76□□□□□ -1.01
RIF1-206ENST00000453091 CAVIN2O95810 425 aa8.76□□□□□ -1.01
RIF1-206ENST00000453091 RMND1Q9NWS8 449 aa8.76□□□□□ -1.01
RIF1-206ENST00000453091 ABCC4O15439 1325 aa8.76□□□□□ -1.01
RIF1-206ENST00000453091 PFKFB1P16118 471 aa8.76□□□□□ -1.01
RIF1-206ENST00000453091 GYS2P54840 703 aa8.76□□□□□ -1.01
RIF1-206ENST00000453091 AMPD3Q01432 767 aa8.76□□□□□ -1.01
RIF1-206ENST00000453091 EAF2Q96CJ1 260 aaPredicted RBP8.76□□□□□ -1.01
RIF1-206ENST00000453091 PSMA7O14818 248 aa8.76□□□□□ -1.01
RIF1-206ENST00000453091 CRNKL1Q9BZJ0 848 aaKnown RBP8.76□□□□□ -1.01
RIF1-206ENST00000453091 GCOM1H8Y6P7 765 aaPredicted RBP8.75□□□□□ -1.01
RIF1-206ENST00000453091 MYZAPP0CAP1 466 aa8.75□□□□□ -1.01
RIF1-206ENST00000453091 KIF5BP33176 963 aa8.75□□□□□ -1.01
RIF1-206ENST00000453091 KIF5AQ12840 1032 aa8.75□□□□□ -1.01
RIF1-206ENST00000453091 NF2P35240 595 aa8.75□□□□□ -1.01
RIF1-206ENST00000453091 LRRC24Q50LG9 513 aa8.75□□□□□ -1.01
RIF1-206ENST00000453091 PUS3Q9BZE2 481 aaKnown RBP8.75□□□□□ -1.01
RIF1-206ENST00000453091 GPCPD1Q9NPB8 672 aa8.75□□□□□ -1.01
RIF1-206ENST00000453091 E7EWF7 191 aa8.75□□□□□ -1.01
RIF1-206ENST00000453091 ZRSR2Q15696 482 aaKnown RBP8.75□□□□□ -1.01
RIF1-206ENST00000453091 NELFCDQ8IXH7 590 aa8.75□□□□□ -1.01
RIF1-206ENST00000453091 JAKMIP2Q96AA8 810 aa8.75□□□□□ -1.01
RIF1-206ENST00000453091 LUC7L2Q9Y383 392 aaKnown RBP8.75□□□□□ -1.01
RIF1-206ENST00000453091 CTNNA2P26232 953 aa8.75□□□□□ -1.01
RIF1-206ENST00000453091 DCAF17Q5H9S7 520 aaPredicted RBP8.75□□□□□ -1.01
RIF1-206ENST00000453091 MSL1Q68DK7 614 aa8.75□□□□□ -1.01
RIF1-206ENST00000453091 HDXQ7Z353 690 aa8.75□□□□□ -1.01
RIF1-206ENST00000453091 CADPS2Q86UW7 1296 aa8.75□□□□□ -1.01
RIF1-206ENST00000453091 FAM76AQ8TAV0 307 aa8.75□□□□□ -1.01
RIF1-206ENST00000453091 NAPGQ99747 312 aaPredicted RBP8.75□□□□□ -1.01
RIF1-206ENST00000453091 SPATA31E1Q6ZUB1 1445 aa8.75□□□□□ -1.01
RIF1-206ENST00000453091 KIAA0753Q2KHM9 967 aa8.75□□□□□ -1.01
RIF1-206ENST00000453091 CCDC121Q6ZUS5 278 aa8.75□□□□□ -1.01
RIF1-206ENST00000453091 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.75□□□□□ -1.01
RIF1-206ENST00000453091 TRMT2AQ8IZ69 625 aaKnown RBP8.75□□□□□ -1.01
RIF1-206ENST00000453091 AFAP1L1Q8TED9 768 aa8.75□□□□□ -1.01
RIF1-206ENST00000453091 PLEKHF1Q96S99 279 aa8.75□□□□□ -1.01
RIF1-206ENST00000453091 KCNK9Q9NPC2 374 aa8.75□□□□□ -1.01
RIF1-206ENST00000453091 GRAMD1CQ8IYS0 662 aa8.75□□□□□ -1.01
RIF1-206ENST00000453091 NOC4LQ9BVI4 516 aaKnown RBP8.75□□□□□ -1.01
RIF1-206ENST00000453091 USP44Q9H0E7 712 aa8.75□□□□□ -1.01
RIF1-206ENST00000453091 MAGI3Q5TCQ9 1506 aa8.74□□□□□ -1.01
RIF1-206ENST00000453091 GPAA1O43292 621 aa8.74□□□□□ -1.01
RIF1-206ENST00000453091 EIF4A1P60842 406 aaKnown RBP8.74□□□□□ -1.01
RIF1-206ENST00000453091 PDE4DQ08499 809 aa8.74□□□□□ -1.01
RIF1-206ENST00000453091 SND1Q7KZF4 910 aaKnown RBP eCLIP8.74□□□□□ -1.01
RIF1-206ENST00000453091 OTUD6BQ8N6M0 293 aa8.74□□□□□ -1.01
RIF1-206ENST00000453091 CUL5Q93034 780 aa8.74□□□□□ -1.01
RIF1-206ENST00000453091 VPS54Q9P1Q0 977 aa8.74□□□□□ -1.01
RIF1-206ENST00000453091 KDM6BO15054 1643 aa8.74□□□□□ -1.01
RIF1-206ENST00000453091 ANKRD65E5RJM6 399 aa8.74□□□□□ -1.01
RIF1-206ENST00000453091 TBCAO75347 108 aaKnown RBP8.74□□□□□ -1.01
RIF1-206ENST00000453091 IVLP07476 585 aa8.74□□□□□ -1.01
RIF1-206ENST00000453091 ZFYP08048 801 aaPredicted RBP8.74□□□□□ -1.01
RIF1-206ENST00000453091 RAB34Q9BZG1 259 aa8.74□□□□□ -1.01
RIF1-206ENST00000453091 WDR7Q9Y4E6 1490 aa8.74□□□□□ -1.01
RIF1-206ENST00000453091 KRT86O43790 486 aa8.74□□□□□ -1.01
RIF1-206ENST00000453091 ZMYND10O75800 440 aa8.74□□□□□ -1.01
RIF1-206ENST00000453091 WWC2Q6AWC2 1192 aa8.74□□□□□ -1.01
RIF1-206ENST00000453091 DPH6Q7L8W6 267 aa8.74□□□□□ -1.01
RIF1-206ENST00000453091 BRAPQ7Z569 592 aa8.74□□□□□ -1.01
RIF1-206ENST00000453091 ZNF589Q86UQ0 364 aaPredicted RBP8.74□□□□□ -1.01
RIF1-206ENST00000453091 CCDC114Q96M63 670 aa8.74□□□□□ -1.01
RIF1-206ENST00000453091 NLRP3Q96P20 1036 aa8.74□□□□□ -1.01
RIF1-206ENST00000453091 SYNRGQ9UMZ2 1314 aa8.74□□□□□ -1.01
RIF1-206ENST00000453091 BIVM-ERCC5R4GMW8 1640 aa8.74□□□□□ -1.01
RIF1-206ENST00000453091 A0A1W2PRG0 241 aa8.74□□□□□ -1.01
RIF1-206ENST00000453091 CFAP58Q5T655 872 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms