RNA–Protein interactions for RNA: ENST00000452520.1

HMGB1P26-201, Transcript of high mobility group box 1 pseudogene 26, humanhuman

BASIC

Gene HMGB1P26, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P26-201ENST00000452520 CCSER2Q9H7U1 834 aa7.99□□□□□ -1.13
HMGB1P26-201ENST00000452520 KCNQ5Q9NR82 932 aa7.99□□□□□ -1.13
HMGB1P26-201ENST00000452520 GREM1O60565 184 aa7.98□□□□□ -1.13
HMGB1P26-201ENST00000452520 TRIM37O94972 964 aa7.98□□□□□ -1.13
HMGB1P26-201ENST00000452520 GARTP22102 1010 aa7.98□□□□□ -1.13
HMGB1P26-201ENST00000452520 COL8A1P27658 744 aa7.98□□□□□ -1.13
HMGB1P26-201ENST00000452520 ZC3H6P61129 1189 aaKnown RBP7.98□□□□□ -1.13
HMGB1P26-201ENST00000452520 FAM160A1Q05DH4 1040 aa7.98□□□□□ -1.13
HMGB1P26-201ENST00000452520 PTPN11Q06124 597 aaPredicted RBP7.98□□□□□ -1.13
HMGB1P26-201ENST00000452520 CCDC84Q86UT8 332 aaPredicted RBP7.98□□□□□ -1.13
HMGB1P26-201ENST00000452520 UBASH3BQ8TF42 649 aa7.98□□□□□ -1.13
HMGB1P26-201ENST00000452520 JARID2Q92833 1246 aaPredicted RBP7.98□□□□□ -1.13
HMGB1P26-201ENST00000452520 SPON2Q9BUD6 331 aa7.98□□□□□ -1.13
HMGB1P26-201ENST00000452520 MIR1-1HGQ9H1L0 117 aa7.98□□□□□ -1.13
HMGB1P26-201ENST00000452520 KRT82Q9NSB4 513 aa7.98□□□□□ -1.13
HMGB1P26-201ENST00000452520 FAM181BA6NEQ2 426 aa7.97□□□□□ -1.13
HMGB1P26-201ENST00000452520 WISP1O95388 367 aa7.97□□□□□ -1.13
HMGB1P26-201ENST00000452520 SPATA31C1P0DKV0 1188 aa7.97□□□□□ -1.13
HMGB1P26-201ENST00000452520 EXOSC6Q5RKV6 272 aaKnown RBP7.97□□□□□ -1.13
HMGB1P26-201ENST00000452520 GOLM1Q8NBJ4 401 aa7.97□□□□□ -1.13
HMGB1P26-201ENST00000452520 MRPL18Q9H0U6 180 aaKnown RBP7.97□□□□□ -1.13
HMGB1P26-201ENST00000452520 MEGF11A6BM72 1044 aa7.96□□□□□ -1.14
HMGB1P26-201ENST00000452520 ZNF862O60290 1169 aa7.96□□□□□ -1.14
HMGB1P26-201ENST00000452520 TNNI2P48788 182 aa7.96□□□□□ -1.14
HMGB1P26-201ENST00000452520 SEPT6Q14141 434 aa7.96□□□□□ -1.14
HMGB1P26-201ENST00000452520 PDE3AQ14432 1141 aa7.96□□□□□ -1.14
HMGB1P26-201ENST00000452520 SNAP47Q5SQN1 464 aa7.96□□□□□ -1.14
HMGB1P26-201ENST00000452520 SHISA2Q6UWI4 295 aa7.96□□□□□ -1.14
HMGB1P26-201ENST00000452520 KIAA1211Q6ZU35 1233 aa7.96□□□□□ -1.14
HMGB1P26-201ENST00000452520 KIAA0825Q8IV33 1275 aa7.96□□□□□ -1.14
HMGB1P26-201ENST00000452520 TMEM130Q8N3G9 435 aa7.96□□□□□ -1.14
HMGB1P26-201ENST00000452520 GPBAR1Q8TDU6 330 aa7.96□□□□□ -1.14
HMGB1P26-201ENST00000452520 WDR89Q96FK6 387 aaPredicted RBP7.96□□□□□ -1.14
HMGB1P26-201ENST00000452520 C8orf37Q96NL8 207 aa7.96□□□□□ -1.14
HMGB1P26-201ENST00000452520 SUPT16HQ9Y5B9 1047 aaKnown RBP7.96□□□□□ -1.14
HMGB1P26-201ENST00000452520 FAM221AA4D161 298 aa7.95□□□□□ -1.14
HMGB1P26-201ENST00000452520 F13A1P00488 732 aa7.95□□□□□ -1.14
HMGB1P26-201ENST00000452520 SELPP16109 830 aa7.95□□□□□ -1.14
HMGB1P26-201ENST00000452520 LIG1P18858 919 aa7.95□□□□□ -1.14
HMGB1P26-201ENST00000452520 PAK2Q13177 524 aa7.95□□□□□ -1.14
HMGB1P26-201ENST00000452520 HP1BP3Q5SSJ5 553 aaPredicted RBP7.95□□□□□ -1.14
HMGB1P26-201ENST00000452520 BNC2Q6ZN30 1099 aaPredicted RBP7.95□□□□□ -1.14
HMGB1P26-201ENST00000452520 GATAD2BQ8WXI9 593 aa7.95□□□□□ -1.14
HMGB1P26-201ENST00000452520 GAL3ST3Q96A11 431 aa7.95□□□□□ -1.14
HMGB1P26-201ENST00000452520 LENG1Q96BZ8 264 aaPredicted RBP7.95□□□□□ -1.14
HMGB1P26-201ENST00000452520 EAF1Q96JC9 268 aaPredicted RBP7.95□□□□□ -1.14
HMGB1P26-201ENST00000452520 TMPRSS13Q9BYE2 586 aa7.95□□□□□ -1.14
HMGB1P26-201ENST00000452520 CAPN10Q9HC96 672 aa7.95□□□□□ -1.14
HMGB1P26-201ENST00000452520 INPP5FQ9Y2H2 1132 aa7.95□□□□□ -1.14
HMGB1P26-201ENST00000452520 AOC2O75106 756 aa7.94□□□□□ -1.14
HMGB1P26-201ENST00000452520 NAALADL2Q58DX5 795 aa7.94□□□□□ -1.14
HMGB1P26-201ENST00000452520 FAM196AQ6ZSG2 479 aa7.94□□□□□ -1.14
HMGB1P26-201ENST00000452520 ACAD11Q709F0 780 aa7.94□□□□□ -1.14
HMGB1P26-201ENST00000452520 ACSBG1Q96GR2 724 aa7.94□□□□□ -1.14
HMGB1P26-201ENST00000452520 RUSC1Q9BVN2 902 aa7.94□□□□□ -1.14
HMGB1P26-201ENST00000452520 NT5C1AQ9BXI3 368 aa7.94□□□□□ -1.14
HMGB1P26-201ENST00000452520 ROBO2Q9HCK4 1378 aa7.94□□□□□ -1.14
HMGB1P26-201ENST00000452520 C9orf172C9J069 976 aa7.93□□□□□ -1.14
HMGB1P26-201ENST00000452520 CILPO75339 1184 aa7.93□□□□□ -1.14
HMGB1P26-201ENST00000452520 SLFN14P0C7P3 912 aa7.93□□□□□ -1.14
HMGB1P26-201ENST00000452520 GJA8P48165 433 aa7.93□□□□□ -1.14
HMGB1P26-201ENST00000452520 KIF4BQ2VIQ3 1234 aa7.93□□□□□ -1.14
HMGB1P26-201ENST00000452520 NUTM2GQ5VZR2 741 aa7.93□□□□□ -1.14
HMGB1P26-201ENST00000452520 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.93□□□□□ -1.14
HMGB1P26-201ENST00000452520 ALYREFQ86V81 257 aaKnown RBP7.93□□□□□ -1.14
HMGB1P26-201ENST00000452520 SLC43A3Q8NBI5 491 aa7.93□□□□□ -1.14
HMGB1P26-201ENST00000452520 TINF2Q9BSI4 451 aa7.93□□□□□ -1.14
HMGB1P26-201ENST00000452520 RAD18Q9NS91 495 aa7.93□□□□□ -1.14
HMGB1P26-201ENST00000452520 UBP1Q9NZI7 540 aa7.93□□□□□ -1.14
HMGB1P26-201ENST00000452520 PCDHA4Q9UN74 947 aa7.93□□□□□ -1.14
HMGB1P26-201ENST00000452520 SYNGAP1Q96PV0 1343 aa7.93□□□□□ -1.14
HMGB1P26-201ENST00000452520 F8W735 103 aaPredicted RBP7.92□□□□□ -1.14
HMGB1P26-201ENST00000452520 HNRNPUQ00839 825 aaKnown RBP eCLIP7.92□□□□□ -1.14
HMGB1P26-201ENST00000452520 GNL2Q13823 731 aaKnown RBP7.92□□□□□ -1.14
HMGB1P26-201ENST00000452520 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.92□□□□□ -1.14
HMGB1P26-201ENST00000452520 SMG8Q8ND04 991 aaKnown RBP7.92□□□□□ -1.14
HMGB1P26-201ENST00000452520 WDR18Q9BV38 432 aa7.92□□□□□ -1.14
HMGB1P26-201ENST00000452520 RNF208Q9H0X6 261 aa7.92□□□□□ -1.14
HMGB1P26-201ENST00000452520 SUGCTQ9HAC7 445 aa7.92□□□□□ -1.14
HMGB1P26-201ENST00000452520 STK17AQ9UEE5 414 aa7.92□□□□□ -1.14
HMGB1P26-201ENST00000452520 USP21Q9UK80 565 aa7.92□□□□□ -1.14
HMGB1P26-201ENST00000452520 ALX3O95076 343 aa7.91□□□□□ -1.14
HMGB1P26-201ENST00000452520 APBA3O96018 575 aa7.91□□□□□ -1.14
HMGB1P26-201ENST00000452520 CRKP46108 304 aa7.91□□□□□ -1.14
HMGB1P26-201ENST00000452520 NRG1Q02297 640 aaPredicted RBP7.91□□□□□ -1.14
HMGB1P26-201ENST00000452520 INPP5AQ14642 412 aa7.91□□□□□ -1.14
HMGB1P26-201ENST00000452520 ZC3H12AQ5D1E8 599 aaKnown RBP7.91□□□□□ -1.14
HMGB1P26-201ENST00000452520 DIEXFQ68CQ4 756 aaKnown RBP7.91□□□□□ -1.14
HMGB1P26-201ENST00000452520 AGGF1Q8N302 714 aaeCLIP7.91□□□□□ -1.14
HMGB1P26-201ENST00000452520 FBXO27Q8NI29 283 aa7.91□□□□□ -1.14
HMGB1P26-201ENST00000452520 GPRASP2Q96D09 838 aa7.91□□□□□ -1.14
HMGB1P26-201ENST00000452520 NACC1Q96RE7 527 aa7.91□□□□□ -1.14
HMGB1P26-201ENST00000452520 AKTIPQ9H8T0 292 aa7.91□□□□□ -1.14
HMGB1P26-201ENST00000452520 GFRA2O00451 464 aa7.9□□□□□ -1.14
HMGB1P26-201ENST00000452520 CDK8P49336 464 aa7.9□□□□□ -1.14
HMGB1P26-201ENST00000452520 RPL6Q02878 288 aaKnown RBP7.9□□□□□ -1.14
HMGB1P26-201ENST00000452520 APOBRQ0VD83 1088 aa7.9□□□□□ -1.14
HMGB1P26-201ENST00000452520 MPP2Q14168 576 aa7.9□□□□□ -1.14
HMGB1P26-201ENST00000452520 AKAP4Q5JQC9 854 aa7.9□□□□□ -1.14
HMGB1P26-201ENST00000452520 VPS37DQ86XT2 251 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms