RNA–Protein interactions for RNA: ENST00000451517.5

NDUFA3-209, Transcript of NADH:ubiquinone oxidoreductase subunit A3, humanhuman

TSL 1 (best)

Gene NDUFA3, Length 445 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3-209ENST00000451517 SLF2Q8IX21 1173 aa13.34□□□□□ -0.27
NDUFA3-209ENST00000451517 CERS5Q8N5B7 392 aa13.34□□□□□ -0.27
NDUFA3-209ENST00000451517 SPRYD3Q8NCJ5 442 aa13.34□□□□□ -0.27
NDUFA3-209ENST00000451517 CRNKL1Q9BZJ0 848 aaKnown RBP13.34□□□□□ -0.27
NDUFA3-209ENST00000451517 VPS33BQ9H267 617 aa13.34□□□□□ -0.27
NDUFA3-209ENST00000451517 DBNDD1Q9H9R9 158 aa13.34□□□□□ -0.27
NDUFA3-209ENST00000451517 AATFQ9NY61 560 aaKnown RBP eCLIP13.34□□□□□ -0.27
NDUFA3-209ENST00000451517 LIMCH1Q9UPQ0 1083 aa13.34□□□□□ -0.27
NDUFA3-209ENST00000451517 CHD4Q14839 1912 aa13.33□□□□□ -0.28
NDUFA3-209ENST00000451517 BAG3O95817 575 aa13.33□□□□□ -0.28
NDUFA3-209ENST00000451517 TDO2P48775 406 aa13.33□□□□□ -0.28
NDUFA3-209ENST00000451517 EXOSC10Q01780 885 aaKnown RBP13.33□□□□□ -0.28
NDUFA3-209ENST00000451517 ANKRD1Q15327 319 aa13.33□□□□□ -0.28
NDUFA3-209ENST00000451517 STRIP1Q5VSL9 837 aa13.33□□□□□ -0.28
NDUFA3-209ENST00000451517 TBC1D10CQ8IV04 446 aa13.33□□□□□ -0.28
NDUFA3-209ENST00000451517 MB21D2Q8IYB1 491 aaPredicted RBP13.33□□□□□ -0.28
NDUFA3-209ENST00000451517 SDR42E1Q8WUS8 393 aa13.33□□□□□ -0.28
NDUFA3-209ENST00000451517 SLKQ9H2G2 1235 aaPredicted RBP13.33□□□□□ -0.28
NDUFA3-209ENST00000451517 ATP8A2Q9NTI2 1148 aa13.33□□□□□ -0.28
NDUFA3-209ENST00000451517 ANAPC4Q9UJX5 808 aa13.33□□□□□ -0.28
NDUFA3-209ENST00000451517 BRCA1P38398 1863 aaKnown RBP13.32□□□□□ -0.28
NDUFA3-209ENST00000451517 GPR75-ASB3A0A0A6YYF3 556 aa13.32□□□□□ -0.28
NDUFA3-209ENST00000451517 PPIP5K2O43314 1243 aa13.32□□□□□ -0.28
NDUFA3-209ENST00000451517 HSP90AA1P07900 732 aaKnown RBP13.32□□□□□ -0.28
NDUFA3-209ENST00000451517 TOB2Q14106 344 aaPredicted RBP13.32□□□□□ -0.28
NDUFA3-209ENST00000451517 DACT2Q5SW24 774 aa13.32□□□□□ -0.28
NDUFA3-209ENST00000451517 NOL8Q76FK4 1167 aaKnown RBP13.32□□□□□ -0.28
NDUFA3-209ENST00000451517 FBXL16Q8N461 479 aa13.32□□□□□ -0.28
NDUFA3-209ENST00000451517 NCOA7Q8NI08 942 aa13.32□□□□□ -0.28
NDUFA3-209ENST00000451517 FBXW7Q969H0 707 aa13.32□□□□□ -0.28
NDUFA3-209ENST00000451517 ZSCAN31Q96LW9 406 aaPredicted RBP13.32□□□□□ -0.28
NDUFA3-209ENST00000451517 NOL10Q9BSC4 688 aaKnown RBP13.32□□□□□ -0.28
NDUFA3-209ENST00000451517 AGXT2Q9BYV1 514 aa13.32□□□□□ -0.28
NDUFA3-209ENST00000451517 WDR19Q8NEZ3 1342 aa13.32□□□□□ -0.28
NDUFA3-209ENST00000451517 ZNF646O15015 1829 aaPredicted RBP13.32□□□□□ -0.28
NDUFA3-209ENST00000451517 USP17L3A6NCW0 530 aa13.31□□□□□ -0.28
NDUFA3-209ENST00000451517 USP17L4A6NCW7 530 aa13.31□□□□□ -0.28
NDUFA3-209ENST00000451517 PPARAQ07869 468 aa13.31□□□□□ -0.28
NDUFA3-209ENST00000451517 Q6ZUG5 572 aa13.31□□□□□ -0.28
NDUFA3-209ENST00000451517 USP17L1Q7RTZ2 530 aa13.31□□□□□ -0.28
NDUFA3-209ENST00000451517 SH3RF3Q8TEJ3 882 aaPredicted RBP13.31□□□□□ -0.28
NDUFA3-209ENST00000451517 INTS4Q96HW7 963 aaKnown RBP13.31□□□□□ -0.28
NDUFA3-209ENST00000451517 TCEANC2Q96MN5 208 aa13.31□□□□□ -0.28
NDUFA3-209ENST00000451517 MXD3Q9BW11 206 aa13.31□□□□□ -0.28
NDUFA3-209ENST00000451517 DCP1AQ9NPI6 582 aaPredicted RBP13.31□□□□□ -0.28
NDUFA3-209ENST00000451517 KCNQ5Q9NR82 932 aa13.31□□□□□ -0.28
NDUFA3-209ENST00000451517 SH2B1Q9NRF2 756 aaPredicted RBP13.31□□□□□ -0.28
NDUFA3-209ENST00000451517 PPP1R1BQ9UD71 204 aaPredicted RBP13.31□□□□□ -0.28
NDUFA3-209ENST00000451517 CIZ1Q9ULV3 898 aaPredicted RBP13.31□□□□□ -0.28
NDUFA3-209ENST00000451517 YDJCA8MPS7 323 aa13.3□□□□□ -0.28
NDUFA3-209ENST00000451517 PLCG2P16885 1265 aa13.3□□□□□ -0.28
NDUFA3-209ENST00000451517 MCM5P33992 734 aa13.3□□□□□ -0.28
NDUFA3-209ENST00000451517 BTDP43251 543 aa13.3□□□□□ -0.28
NDUFA3-209ENST00000451517 SBK1Q52WX2 424 aa13.3□□□□□ -0.28
NDUFA3-209ENST00000451517 AKNAD1Q5T1N1 836 aa13.3□□□□□ -0.28
NDUFA3-209ENST00000451517 RALYLQ86SE5 291 aaKnown RBP13.3□□□□□ -0.28
NDUFA3-209ENST00000451517 STAG1Q8WVM7 1258 aa13.3□□□□□ -0.28
NDUFA3-209ENST00000451517 LARP6Q9BRS8 491 aaKnown RBP13.3□□□□□ -0.28
NDUFA3-209ENST00000451517 MRIQ9BWK5 157 aa13.3□□□□□ -0.28
NDUFA3-209ENST00000451517 SPON1Q9HCB6 807 aa13.3□□□□□ -0.28
NDUFA3-209ENST00000451517 FOXD4L1Q9NU39 408 aa13.3□□□□□ -0.28
NDUFA3-209ENST00000451517 CHMP5Q9NZZ3 219 aa13.3□□□□□ -0.28
NDUFA3-209ENST00000451517 MKRN1Q9UHC7 482 aaKnown RBP13.3□□□□□ -0.28
NDUFA3-209ENST00000451517 TPCN1Q9ULQ1 816 aa13.3□□□□□ -0.28
NDUFA3-209ENST00000451517 TTF2Q9UNY4 1162 aaKnown RBP13.3□□□□□ -0.28
NDUFA3-209ENST00000451517 DAGLAQ9Y4D2 1042 aa13.3□□□□□ -0.28
NDUFA3-209ENST00000451517 TACC3Q9Y6A5 838 aa13.3□□□□□ -0.28
NDUFA3-209ENST00000451517 COL4A5P29400 1685 aa13.29□□□□□ -0.28
NDUFA3-209ENST00000451517 LARGE1O95461 756 aa13.29□□□□□ -0.28
NDUFA3-209ENST00000451517 ANTXR2P58335 489 aa13.29□□□□□ -0.28
NDUFA3-209ENST00000451517 RHBDL3P58872 404 aa13.29□□□□□ -0.28
NDUFA3-209ENST00000451517 HDLBPQ00341 1268 aaKnown RBP13.29□□□□□ -0.28
NDUFA3-209ENST00000451517 CTDSPL2Q05D32 466 aa13.29□□□□□ -0.28
NDUFA3-209ENST00000451517 TRDNQ13061 729 aa13.29□□□□□ -0.28
NDUFA3-209ENST00000451517 CTR9Q6PD62 1173 aa13.29□□□□□ -0.28
NDUFA3-209ENST00000451517 HHIPL2Q6UWX4 724 aa13.29□□□□□ -0.28
NDUFA3-209ENST00000451517 KLHL34Q8N239 644 aa13.29□□□□□ -0.28
NDUFA3-209ENST00000451517 LARGE2Q8N3Y3 721 aa13.29□□□□□ -0.28
NDUFA3-209ENST00000451517 RNF41Q9H4P4 317 aaPredicted RBP13.29□□□□□ -0.28
NDUFA3-209ENST00000451517 CNNM2Q9H8M5 875 aa13.29□□□□□ -0.28
NDUFA3-209ENST00000451517 CWC22Q9HCG8 908 aaKnown RBP13.29□□□□□ -0.28
NDUFA3-209ENST00000451517 ZNF277Q9NRM2 450 aaPredicted RBP13.29□□□□□ -0.28
NDUFA3-209ENST00000451517 ARPP21Q9UBL0 812 aaPredicted RBP13.29□□□□□ -0.28
NDUFA3-209ENST00000451517 NEDD4P46934 1319 aa13.29□□□□□ -0.28
NDUFA3-209ENST00000451517 SCN9AQ15858 1988 aa13.29□□□□□ -0.28
NDUFA3-209ENST00000451517 MINDY4BA8MYZ0 360 aa13.28□□□□□ -0.28
NDUFA3-209ENST00000451517 USP17L12C9JPN9 530 aa13.28□□□□□ -0.28
NDUFA3-209ENST00000451517 USP17L21D6R901 530 aa13.28□□□□□ -0.28
NDUFA3-209ENST00000451517 PRC1O43663 620 aa13.28□□□□□ -0.28
NDUFA3-209ENST00000451517 FGRP09769 529 aa13.28□□□□□ -0.28
NDUFA3-209ENST00000451517 USP5P45974 858 aa13.28□□□□□ -0.28
NDUFA3-209ENST00000451517 ME3Q16798 604 aa13.28□□□□□ -0.28
NDUFA3-209ENST00000451517 MFSD6Q6ZSS7 791 aa13.28□□□□□ -0.28
NDUFA3-209ENST00000451517 LRRC2Q9BYS8 371 aa13.28□□□□□ -0.28
NDUFA3-209ENST00000451517 KRT23Q9C075 422 aa13.28□□□□□ -0.28
NDUFA3-209ENST00000451517 MYH2Q9UKX2 1941 aa13.28□□□□□ -0.28
NDUFA3-209ENST00000451517 CYP2D7A0A087X1C5 515 aa13.27□□□□□ -0.29
NDUFA3-209ENST00000451517 B4E1Z4 1266 aa13.27□□□□□ -0.29
NDUFA3-209ENST00000451517 F8W031 263 aaPredicted RBP13.27□□□□□ -0.29
NDUFA3-209ENST00000451517 NFKBIEO00221 500 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms