RNA–Protein interactions for RNA: ENST00000451070.1

LINC01238-204, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 4

Gene LINC01238, Length 599 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-204ENST00000451070 TMOD2Q9NZR1 351 aa12.34□□□□□ -0.43
LINC01238-204ENST00000451070 CEP126Q9P2H0 1117 aa12.34□□□□□ -0.43
LINC01238-204ENST00000451070 DAGLAQ9Y4D2 1042 aa12.34□□□□□ -0.43
LINC01238-204ENST00000451070 CSADQ9Y600 493 aa12.34□□□□□ -0.43
LINC01238-204ENST00000451070 AK9Q5TCS8 1911 aa12.34□□□□□ -0.43
LINC01238-204ENST00000451070 MYH2Q9UKX2 1941 aa12.33□□□□□ -0.44
LINC01238-204ENST00000451070 CCER2I3L3R5 266 aa12.33□□□□□ -0.44
LINC01238-204ENST00000451070 PHKA1P46020 1223 aa12.33□□□□□ -0.44
LINC01238-204ENST00000451070 SP3Q02447 781 aa12.33□□□□□ -0.44
LINC01238-204ENST00000451070 FAM43AQ8N2R8 423 aa12.33□□□□□ -0.44
LINC01238-204ENST00000451070 ZKSCAN4Q969J2 545 aaPredicted RBP12.33□□□□□ -0.44
LINC01238-204ENST00000451070 WRNIP1Q96S55 665 aa12.33□□□□□ -0.44
LINC01238-204ENST00000451070 DAXXQ9UER7 740 aaPredicted RBP12.33□□□□□ -0.44
LINC01238-204ENST00000451070 RBBP6Q7Z6E9 1792 aaKnown RBP12.33□□□□□ -0.44
LINC01238-204ENST00000451070 ZSWIM8A7E2V4 1837 aa12.32□□□□□ -0.44
LINC01238-204ENST00000451070 ADORA1P30542 326 aa12.32□□□□□ -0.44
LINC01238-204ENST00000451070 IL15P40933 162 aaPredicted RBP12.32□□□□□ -0.44
LINC01238-204ENST00000451070 NFIAQ12857 509 aa12.32□□□□□ -0.44
LINC01238-204ENST00000451070 TAF1CQ15572 869 aaPredicted RBP12.32□□□□□ -0.44
LINC01238-204ENST00000451070 CDC42EP5Q6NZY7 148 aa12.32□□□□□ -0.44
LINC01238-204ENST00000451070 MIGA2Q7L4E1 593 aa12.32□□□□□ -0.44
LINC01238-204ENST00000451070 ERO1BQ86YB8 467 aa12.32□□□□□ -0.44
LINC01238-204ENST00000451070 COPRSQ9NQ92 184 aa12.32□□□□□ -0.44
LINC01238-204ENST00000451070 PTPN22Q9Y2R2 807 aa12.32□□□□□ -0.44
LINC01238-204ENST00000451070 MKI67P46013 3256 aaKnown RBP12.32□□□□□ -0.44
LINC01238-204ENST00000451070 SALL1Q9NSC2 1324 aa12.32□□□□□ -0.44
LINC01238-204ENST00000451070 BRCA2P51587 3418 aa12.31□□□□□ -0.44
LINC01238-204ENST00000451070 IRF6O14896 467 aa12.31□□□□□ -0.44
LINC01238-204ENST00000451070 LDHBP07195 334 aaKnown RBP12.31□□□□□ -0.44
LINC01238-204ENST00000451070 INPP5BP32019 993 aa12.31□□□□□ -0.44
LINC01238-204ENST00000451070 INTS3Q68E01 1043 aaKnown RBP12.31□□□□□ -0.44
LINC01238-204ENST00000451070 FAM151AQ8WW52 585 aa12.31□□□□□ -0.44
LINC01238-204ENST00000451070 ARHGAP45Q92619 1136 aa12.31□□□□□ -0.44
LINC01238-204ENST00000451070 EFCC1Q9HA90 598 aa12.31□□□□□ -0.44
LINC01238-204ENST00000451070 GNL3LQ9NVN8 582 aaKnown RBP12.31□□□□□ -0.44
LINC01238-204ENST00000451070 FAM198AQ9UFP1 575 aa12.31□□□□□ -0.44
LINC01238-204ENST00000451070 DENND2AQ9ULE3 1009 aa12.31□□□□□ -0.44
LINC01238-204ENST00000451070 DOCK2Q92608 1830 aa12.3□□□□□ -0.44
LINC01238-204ENST00000451070 POTEFA5A3E0 1075 aa12.3□□□□□ -0.44
LINC01238-204ENST00000451070 BTBD19C9JJ37 291 aa12.3□□□□□ -0.44
LINC01238-204ENST00000451070 SEMA3EO15041 775 aa12.3□□□□□ -0.44
LINC01238-204ENST00000451070 MYCNP04198 464 aaPredicted RBP12.3□□□□□ -0.44
LINC01238-204ENST00000451070 CETPP11597 493 aa12.3□□□□□ -0.44
LINC01238-204ENST00000451070 TCP10Q12799 353 aa12.3□□□□□ -0.44
LINC01238-204ENST00000451070 PPIL2Q13356 520 aa12.3□□□□□ -0.44
LINC01238-204ENST00000451070 DCAF15Q66K64 600 aa12.3□□□□□ -0.44
LINC01238-204ENST00000451070 CCDC102BQ68D86 513 aa12.3□□□□□ -0.44
LINC01238-204ENST00000451070 ZFPM1Q8IX07 1006 aa12.3□□□□□ -0.44
LINC01238-204ENST00000451070 HOOK2Q96ED9 719 aa12.3□□□□□ -0.44
LINC01238-204ENST00000451070 ZNF341Q9BYN7 854 aa12.3□□□□□ -0.44
LINC01238-204ENST00000451070 ZFYVE28Q9HCC9 887 aa12.3□□□□□ -0.44
LINC01238-204ENST00000451070 ZNF112Q9UJU3 913 aa12.3□□□□□ -0.44
LINC01238-204ENST00000451070 HDAC5Q9UQL6 1122 aa12.3□□□□□ -0.44
LINC01238-204ENST00000451070 TNNQ9UQP3 1299 aa12.3□□□□□ -0.44
LINC01238-204ENST00000451070 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.3□□□□□ -0.44
LINC01238-204ENST00000451070 TIMM10P62072 90 aa12.29□□□□□ -0.44
LINC01238-204ENST00000451070 SNAPC2Q13487 334 aa12.29□□□□□ -0.44
LINC01238-204ENST00000451070 MTX1Q13505 466 aa12.29□□□□□ -0.44
LINC01238-204ENST00000451070 RASGRF1Q13972 1273 aa12.29□□□□□ -0.44
LINC01238-204ENST00000451070 ARMC5Q96C12 935 aa12.29□□□□□ -0.44
LINC01238-204ENST00000451070 GAKO14976 1311 aa12.29□□□□□ -0.44
LINC01238-204ENST00000451070 ATRNL1Q5VV63 1379 aa12.29□□□□□ -0.44
LINC01238-204ENST00000451070 A0A1B0GUL7 405 aa12.28□□□□□ -0.44
LINC01238-204ENST00000451070 SRGAP3O43295 1099 aa12.28□□□□□ -0.44
LINC01238-204ENST00000451070 TLR2O60603 784 aa12.28□□□□□ -0.44
LINC01238-204ENST00000451070 GNAI3P08754 354 aa12.28□□□□□ -0.44
LINC01238-204ENST00000451070 TRIM27P14373 513 aa12.28□□□□□ -0.44
LINC01238-204ENST00000451070 PPATQ06203 517 aa12.28□□□□□ -0.44
LINC01238-204ENST00000451070 PRPF38BQ5VTL8 546 aaKnown RBP12.28□□□□□ -0.44
LINC01238-204ENST00000451070 BCL11AQ9H165 835 aa12.28□□□□□ -0.44
LINC01238-204ENST00000451070 ZCCHC17Q9NP64 241 aaKnown RBP12.28□□□□□ -0.44
LINC01238-204ENST00000451070 USP40Q9NVE5 1235 aa12.28□□□□□ -0.44
LINC01238-204ENST00000451070 PDS5AQ29RF7 1337 aaKnown RBP12.28□□□□□ -0.44
LINC01238-204ENST00000451070 RFX7Q2KHR2 1363 aa12.28□□□□□ -0.44
LINC01238-204ENST00000451070 TFCP2Q12800 502 aa12.27□□□□□ -0.45
LINC01238-204ENST00000451070 NOL9Q5SY16 702 aaKnown RBP12.27□□□□□ -0.45
LINC01238-204ENST00000451070 ZGPATQ8N5A5 531 aaKnown RBP12.27□□□□□ -0.45
LINC01238-204ENST00000451070 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.27□□□□□ -0.45
LINC01238-204ENST00000451070 XAGE2Q96GT9 111 aa12.27□□□□□ -0.45
LINC01238-204ENST00000451070 IDI2Q9BXS1 227 aa12.27□□□□□ -0.45
LINC01238-204ENST00000451070 ARHGAP39Q9C0H5 1083 aa12.27□□□□□ -0.45
LINC01238-204ENST00000451070 KCNH4Q9UQ05 1017 aa12.27□□□□□ -0.45
LINC01238-204ENST00000451070 PTCH2Q9Y6C5 1203 aa12.27□□□□□ -0.45
LINC01238-204ENST00000451070 PHF20L1A8MW92 1017 aa12.26□□□□□ -0.45
LINC01238-204ENST00000451070 BCAR3O75815 825 aa12.26□□□□□ -0.45
LINC01238-204ENST00000451070 RGS3P49796 1198 aa12.26□□□□□ -0.45
LINC01238-204ENST00000451070 LACTBP83111 547 aaPredicted RBP12.26□□□□□ -0.45
LINC01238-204ENST00000451070 MOGSQ13724 837 aa12.26□□□□□ -0.45
LINC01238-204ENST00000451070 ATF7IPQ6VMQ6 1270 aa12.26□□□□□ -0.45
LINC01238-204ENST00000451070 SH3BP5LQ7L8J4 393 aa12.26□□□□□ -0.45
LINC01238-204ENST00000451070 ZNF384Q8TF68 577 aa12.26□□□□□ -0.45
LINC01238-204ENST00000451070 FAM163AQ96GL9 167 aaPredicted RBP12.26□□□□□ -0.45
LINC01238-204ENST00000451070 ZNF333Q96JL9 665 aa12.26□□□□□ -0.45
LINC01238-204ENST00000451070 PTPRFP10586 1907 aa12.26□□□□□ -0.45
LINC01238-204ENST00000451070 ADGRA2Q96PE1 1338 aa12.26□□□□□ -0.45
LINC01238-204ENST00000451070 PHIPQ8WWQ0 1821 aa12.25□□□□□ -0.45
LINC01238-204ENST00000451070 PNMA6EA0A0J9YXQ4 647 aa12.25□□□□□ -0.45
LINC01238-204ENST00000451070 ENTPD3O75355 529 aa12.25□□□□□ -0.45
LINC01238-204ENST00000451070 WDHD1O75717 1129 aaPredicted RBP12.25□□□□□ -0.45
LINC01238-204ENST00000451070 SLURP2P0DP57 97 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms