RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 NEK1Q96PY6 1258 aa2.48□□□□□ -2.01
USP53-202ENST00000450251 TEX13AQ9BXU3 409 aaPredicted RBP2.48□□□□□ -2.01
USP53-202ENST00000450251 FAM204AQ9H8W3 233 aa2.48□□□□□ -2.01
USP53-202ENST00000450251 NDUFA13Q9P0J0 144 aa2.48□□□□□ -2.01
USP53-202ENST00000450251 ZNF215Q9UL58 517 aaPredicted RBP2.48□□□□□ -2.01
USP53-202ENST00000450251 RGS12O14924 1447 aa2.48□□□□□ -2.01
USP53-202ENST00000450251 ESRRBO95718 433 aa2.47□□□□□ -2.01
USP53-202ENST00000450251 BMP15O95972 392 aa2.47□□□□□ -2.01
USP53-202ENST00000450251 GFAPP14136 432 aa2.47□□□□□ -2.01
USP53-202ENST00000450251 RARSP54136 660 aaKnown RBP2.47□□□□□ -2.01
USP53-202ENST00000450251 DHX9Q08211 1270 aaKnown RBP2.47□□□□□ -2.01
USP53-202ENST00000450251 FOXD4L6Q3SYB3 417 aaPredicted RBP2.47□□□□□ -2.01
USP53-202ENST00000450251 NBPF14Q5TI25 921 aa2.47□□□□□ -2.01
USP53-202ENST00000450251 FBXO38Q6PIJ6 1188 aa2.47□□□□□ -2.01
USP53-202ENST00000450251 FOXD4L3Q6VB84 417 aaPredicted RBP2.47□□□□□ -2.01
USP53-202ENST00000450251 LRRC8AQ8IWT6 810 aa2.47□□□□□ -2.01
USP53-202ENST00000450251 FAM177A1Q8N128 213 aaPredicted RBP2.47□□□□□ -2.01
USP53-202ENST00000450251 PRPF38AQ8NAV1 312 aaKnown RBP2.47□□□□□ -2.01
USP53-202ENST00000450251 BCAS4Q8TDM0 211 aa2.47□□□□□ -2.01
USP53-202ENST00000450251 STAMBPL1Q96FJ0 436 aa2.47□□□□□ -2.01
USP53-202ENST00000450251 TMX3Q96JJ7 454 aa2.47□□□□□ -2.01
USP53-202ENST00000450251 KLC4Q9NSK0 619 aa2.47□□□□□ -2.01
USP53-202ENST00000450251 IQGAP2Q13576 1575 aa2.47□□□□□ -2.01
USP53-202ENST00000450251 POLR3AO14802 1390 aaPredicted RBP2.47□□□□□ -2.01
USP53-202ENST00000450251 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP2.47□□□□□ -2.01
USP53-202ENST00000450251 DIAPH1O60610 1272 aaKnown RBP2.47□□□□□ -2.01
USP53-202ENST00000450251 GJA8P48165 433 aa2.47□□□□□ -2.01
USP53-202ENST00000450251 PSMC1P62191 440 aaKnown RBP2.47□□□□□ -2.01
USP53-202ENST00000450251 TAF11Q15544 211 aa2.47□□□□□ -2.01
USP53-202ENST00000450251 CDC37Q16543 378 aaPredicted RBP2.47□□□□□ -2.01
USP53-202ENST00000450251 LONRF2Q1L5Z9 754 aa2.47□□□□□ -2.01
USP53-202ENST00000450251 SKIDA1Q1XH10 827 aa2.47□□□□□ -2.01
USP53-202ENST00000450251 BLOC1S2Q6QNY1 142 aa2.47□□□□□ -2.01
USP53-202ENST00000450251 CYP26C1Q6V0L0 522 aa2.47□□□□□ -2.01
USP53-202ENST00000450251 CCDC197Q8NCU1 140 aa2.47□□□□□ -2.01
USP53-202ENST00000450251 ACRBPQ8NEB7 543 aa2.47□□□□□ -2.01
USP53-202ENST00000450251 CARD6Q9BX69 1037 aa2.47□□□□□ -2.01
USP53-202ENST00000450251 PARP2Q9UGN5 583 aa2.47□□□□□ -2.01
USP53-202ENST00000450251 PPP1R9AQ9ULJ8 1098 aa2.47□□□□□ -2.01
USP53-202ENST00000450251 LAMC1P11047 1609 aa2.47□□□□□ -2.01
USP53-202ENST00000450251 COL17A1Q9UMD9 1497 aaPredicted RBP2.47□□□□□ -2.01
USP53-202ENST00000450251 KLHL33A6NCF5 533 aa2.47□□□□□ -2.01
USP53-202ENST00000450251 CCDC160A6NGH7 325 aa2.47□□□□□ -2.01
USP53-202ENST00000450251 RNF40O75150 1001 aa2.47□□□□□ -2.01
USP53-202ENST00000450251 GNAI2P04899 355 aa2.47□□□□□ -2.01
USP53-202ENST00000450251 VIMP08670 466 aaKnown RBP2.47□□□□□ -2.01
USP53-202ENST00000450251 PSMC4P43686 418 aa2.47□□□□□ -2.01
USP53-202ENST00000450251 EPHB4P54760 987 aa2.47□□□□□ -2.01
USP53-202ENST00000450251 RIPPLY1Q0D2K3 151 aa2.47□□□□□ -2.01
USP53-202ENST00000450251 APOBRQ0VD83 1088 aa2.47□□□□□ -2.01
USP53-202ENST00000450251 INF2Q27J81 1249 aa2.47□□□□□ -2.01
USP53-202ENST00000450251 GRAMD4Q6IC98 578 aa2.47□□□□□ -2.01
USP53-202ENST00000450251 GAS2L2Q8NHY3 880 aa2.47□□□□□ -2.01
USP53-202ENST00000450251 IFT81Q8WYA0 676 aa2.47□□□□□ -2.01
USP53-202ENST00000450251 PIK3R5Q8WYR1 880 aa2.47□□□□□ -2.01
USP53-202ENST00000450251 MRPS27Q92552 414 aaKnown RBP2.47□□□□□ -2.01
USP53-202ENST00000450251 NUP88Q99567 741 aaPredicted RBP2.47□□□□□ -2.01
USP53-202ENST00000450251 SLC24A3Q9HC58 644 aa2.47□□□□□ -2.01
USP53-202ENST00000450251 BAIAP2L1Q9UHR4 511 aa2.47□□□□□ -2.01
USP53-202ENST00000450251 EPB41L3Q9Y2J2 1087 aaPredicted RBP2.47□□□□□ -2.01
USP53-202ENST00000450251 FAM169AQ9Y6X4 670 aa2.47□□□□□ -2.01
USP53-202ENST00000450251 ZNF644Q9H582 1327 aaPredicted RBP2.47□□□□□ -2.01
USP53-202ENST00000450251 RTL1A6NKG5 1358 aa2.47□□□□□ -2.01
USP53-202ENST00000450251 ARHGAP10A1A4S6 786 aa2.47□□□□□ -2.01
USP53-202ENST00000450251 TARSL2A2RTX5 802 aaKnown RBP2.47□□□□□ -2.01
USP53-202ENST00000450251 SRRM3A6NNA2 597 aaPredicted RBP2.47□□□□□ -2.01
USP53-202ENST00000450251 AKR1B15C9JRZ8 316 aaPredicted RBP2.47□□□□□ -2.01
USP53-202ENST00000450251 E7EVH7 732 aa2.47□□□□□ -2.01
USP53-202ENST00000450251 BRD1O95696 1058 aa2.47□□□□□ -2.01
USP53-202ENST00000450251 HARSP12081 509 aaKnown RBP2.47□□□□□ -2.01
USP53-202ENST00000450251 PECAM1P16284 738 aaPredicted RBP2.47□□□□□ -2.01
USP53-202ENST00000450251 KRT4P19013 534 aa2.47□□□□□ -2.01
USP53-202ENST00000450251 GJB2P29033 226 aa2.47□□□□□ -2.01
USP53-202ENST00000450251 CNGA1P29973 690 aa2.47□□□□□ -2.01
USP53-202ENST00000450251 CCT5P48643 541 aa2.47□□□□□ -2.01
USP53-202ENST00000450251 SART3Q15020 963 aaKnown RBP2.47□□□□□ -2.01
USP53-202ENST00000450251 NDUFA5Q16718 116 aa2.47□□□□□ -2.01
USP53-202ENST00000450251 CC2D1AQ6P1N0 951 aaPredicted RBP2.47□□□□□ -2.01
USP53-202ENST00000450251 CCDC13Q8IYE1 715 aa2.47□□□□□ -2.01
USP53-202ENST00000450251 MAGEC3Q8TD91 643 aa2.47□□□□□ -2.01
USP53-202ENST00000450251 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP2.47□□□□□ -2.013e-6■■■■■ 50.8
USP53-202ENST00000450251 TEKT1Q969V4 418 aa2.47□□□□□ -2.01
USP53-202ENST00000450251 JPH4Q96JJ6 628 aa2.47□□□□□ -2.01
USP53-202ENST00000450251 PPP1R13BQ96KQ4 1090 aa2.47□□□□□ -2.01
USP53-202ENST00000450251 RUNDC3BQ96NL0 473 aa2.47□□□□□ -2.01
USP53-202ENST00000450251 SIL1Q9H173 461 aa2.47□□□□□ -2.01
USP53-202ENST00000450251 SDAD1Q9NVU7 687 aaKnown RBP eCLIP2.47□□□□□ -2.01
USP53-202ENST00000450251 RGL1Q9NZL6 768 aa2.47□□□□□ -2.01
USP53-202ENST00000450251 PDP2Q9P2J9 529 aa2.47□□□□□ -2.01
USP53-202ENST00000450251 MTRF1LQ9UGC7 380 aaKnown RBP2.47□□□□□ -2.01
USP53-202ENST00000450251 CIDEBQ9UHD4 219 aa2.47□□□□□ -2.01
USP53-202ENST00000450251 MRFAP1Q9Y605 127 aa2.47□□□□□ -2.01
USP53-202ENST00000450251 ERICH2A1L162 156 aa2.47□□□□□ -2.01
USP53-202ENST00000450251 IQCA1LA6NCM1 817 aa2.47□□□□□ -2.01
USP53-202ENST00000450251 BCAR3O75815 825 aa2.47□□□□□ -2.01
USP53-202ENST00000450251 EIF2S2P20042 333 aaKnown RBP2.47□□□□□ -2.01
USP53-202ENST00000450251 CETN2P41208 172 aa2.47□□□□□ -2.01
USP53-202ENST00000450251 NOP2P46087 812 aaKnown RBP2.47□□□□□ -2.01
USP53-202ENST00000450251 PCYT1AP49585 367 aa2.47□□□□□ -2.01
USP53-202ENST00000450251 ITIH3Q06033 890 aa2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms