RNA–Protein interactions for RNA: ENST00000450102.6

SCN5A-208, Transcript of sodium voltage-gated channel alpha subunit 5, humanhuman

TSL 1 (best) BASIC

Gene SCN5A, Length 6,284 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN5A-208ENST00000450102 LETM2Q2VYF4 491 aa12.13□□□□□ -0.47
SCN5A-208ENST00000450102 CCDC122Q5T0U0 273 aa12.13□□□□□ -0.47
SCN5A-208ENST00000450102 C11orf95C9JLR9 678 aaPredicted RBP12.13□□□□□ -0.47
SCN5A-208ENST00000450102 HPDP32754 393 aaPredicted RBP12.13□□□□□ -0.47
SCN5A-208ENST00000450102 IL15P40933 162 aaPredicted RBP12.13□□□□□ -0.47
SCN5A-208ENST00000450102 TTC31Q49AM3 519 aaPredicted RBP12.13□□□□□ -0.47
SCN5A-208ENST00000450102 LMBR1LQ6UX01 489 aa12.13□□□□□ -0.47
SCN5A-208ENST00000450102 DZIP3Q86Y13 1208 aaKnown RBP12.13□□□□□ -0.47
SCN5A-208ENST00000450102 USTQ9Y2C2 406 aa12.13□□□□□ -0.47
SCN5A-208ENST00000450102 KRT19P08727 400 aa12.13□□□□□ -0.47
SCN5A-208ENST00000450102 COPS6Q7L5N1 327 aa12.13□□□□□ -0.47
SCN5A-208ENST00000450102 TAOK1Q7L7X3 1001 aa12.13□□□□□ -0.47
SCN5A-208ENST00000450102 NOP9Q86U38 636 aaKnown RBP12.13□□□□□ -0.47
SCN5A-208ENST00000450102 GTF3C6Q969F1 213 aa12.13□□□□□ -0.47
SCN5A-208ENST00000450102 PPP1R12CQ9BZL4 782 aa12.13□□□□□ -0.47
SCN5A-208ENST00000450102 PAG1Q9NWQ8 432 aa12.13□□□□□ -0.47
SCN5A-208ENST00000450102 RABGAP1Q9Y3P9 1069 aa12.13□□□□□ -0.47
SCN5A-208ENST00000450102 WIZO95785 1651 aa12.13□□□□□ -0.47
SCN5A-208ENST00000450102 PTPDC1A2A3K4 754 aa12.12□□□□□ -0.47
SCN5A-208ENST00000450102 PDE1CQ14123 709 aaPredicted RBP12.12□□□□□ -0.47
SCN5A-208ENST00000450102 CHST3Q7LGC8 479 aa12.12□□□□□ -0.47
SCN5A-208ENST00000450102 TTC6Q86TZ1 520 aa12.12□□□□□ -0.47
SCN5A-208ENST00000450102 MCUR1Q96AQ8 359 aa12.12□□□□□ -0.47
SCN5A-208ENST00000450102 ESYT2A0FGR8 921 aa12.12□□□□□ -0.47
SCN5A-208ENST00000450102 ACTN4O43707 911 aaKnown RBP12.12□□□□□ -0.47
SCN5A-208ENST00000450102 TUBB4BP68371 445 aa12.12□□□□□ -0.47
SCN5A-208ENST00000450102 DDB1Q16531 1140 aa12.12□□□□□ -0.47
SCN5A-208ENST00000450102 CCDC62Q6P9F0 684 aa12.12□□□□□ -0.47
SCN5A-208ENST00000450102 MAEAQ7L5Y9 396 aa12.12□□□□□ -0.47
SCN5A-208ENST00000450102 RBM17Q96I25 401 aaKnown RBP12.12□□□□□ -0.47
SCN5A-208ENST00000450102 CHPF2Q9P2E5 772 aa12.12□□□□□ -0.47
SCN5A-208ENST00000450102 UTP11Q9Y3A2 253 aaKnown RBP12.12□□□□□ -0.47
SCN5A-208ENST00000450102 TOM1O60784 492 aa12.12□□□□□ -0.47
SCN5A-208ENST00000450102 VWA3BQ502W6 1294 aa12.12□□□□□ -0.47
SCN5A-208ENST00000450102 SH2D4BQ5SQS7 431 aa12.12□□□□□ -0.47
SCN5A-208ENST00000450102 NOC4LQ9BVI4 516 aaKnown RBP12.12□□□□□ -0.47
SCN5A-208ENST00000450102 ANKRD2Q9GZV1 360 aa12.12□□□□□ -0.47
SCN5A-208ENST00000450102 ARHGEF10LQ9HCE6 1279 aa12.12□□□□□ -0.47
SCN5A-208ENST00000450102 KIF21BO75037 1637 aa12.12□□□□□ -0.47
SCN5A-208ENST00000450102 WASLO00401 505 aaPredicted RBP12.12□□□□□ -0.47
SCN5A-208ENST00000450102 CALUO43852 315 aaPredicted RBP12.12□□□□□ -0.47
SCN5A-208ENST00000450102 GBP1P32455 592 aa12.12□□□□□ -0.47
SCN5A-208ENST00000450102 MUM1L1Q5H9M0 696 aa12.12□□□□□ -0.47
SCN5A-208ENST00000450102 USP48Q86UV5 1035 aa12.12□□□□□ -0.47
SCN5A-208ENST00000450102 UBL4BQ8N7F7 174 aa12.12□□□□□ -0.47
SCN5A-208ENST00000450102 IQUBQ8NA54 791 aa12.12□□□□□ -0.47
SCN5A-208ENST00000450102 FAM200AQ8TCP9 573 aa12.12□□□□□ -0.47
SCN5A-208ENST00000450102 AZI2Q9H6S1 392 aa12.12□□□□□ -0.47
SCN5A-208ENST00000450102 TXNDC9O14530 226 aa12.12□□□□□ -0.47
SCN5A-208ENST00000450102 TRIM27P14373 513 aa12.12□□□□□ -0.47
SCN5A-208ENST00000450102 DCUN1D2Q6PH85 259 aa12.12□□□□□ -0.47
SCN5A-208ENST00000450102 CARD10Q9BWT7 1032 aa12.12□□□□□ -0.47
SCN5A-208ENST00000450102 DKC1O60832 514 aaKnown RBP eCLIP12.11□□□□□ -0.47
SCN5A-208ENST00000450102 RNASE9P60153 205 aaKnown RBP12.11□□□□□ -0.47
SCN5A-208ENST00000450102 RPS6KA2Q15349 733 aa12.11□□□□□ -0.47
SCN5A-208ENST00000450102 ZYXQ15942 572 aaKnown RBP12.11□□□□□ -0.47
SCN5A-208ENST00000450102 HGSO14964 777 aaPredicted RBP12.11□□□□□ -0.47
SCN5A-208ENST00000450102 OATP04181 439 aa12.11□□□□□ -0.47
SCN5A-208ENST00000450102 DNM2P50570 870 aa12.11□□□□□ -0.47
SCN5A-208ENST00000450102 NOLC1Q14978 699 aaKnown RBP eCLIP12.11□□□□□ -0.47
SCN5A-208ENST00000450102 HELBQ8NG08 1087 aaPredicted RBP12.11□□□□□ -0.47
SCN5A-208ENST00000450102 RBM28Q9NW13 759 aaKnown RBP12.11□□□□□ -0.47
SCN5A-208ENST00000450102 NKTRP30414 1462 aaKnown RBP12.11□□□□□ -0.47
SCN5A-208ENST00000450102 ARHGEF35A5YM69 484 aa12.11□□□□□ -0.47
SCN5A-208ENST00000450102 HMGB1P1B2RPK0 211 aaPredicted RBP12.11□□□□□ -0.47
SCN5A-208ENST00000450102 DDX39AO00148 427 aaKnown RBP12.11□□□□□ -0.47
SCN5A-208ENST00000450102 LMNTD2Q8IXW0 634 aa12.11□□□□□ -0.47
SCN5A-208ENST00000450102 WHAMMQ8TF30 809 aa12.11□□□□□ -0.47
SCN5A-208ENST00000450102 CD2APQ9Y5K6 639 aa12.11□□□□□ -0.47
SCN5A-208ENST00000450102 DAPK1P53355 1430 aa12.11□□□□□ -0.47
SCN5A-208ENST00000450102 I3L4J1 428 aa12.11□□□□□ -0.47
SCN5A-208ENST00000450102 ASIC2Q16515 512 aa12.11□□□□□ -0.47
SCN5A-208ENST00000450102 HHATQ5VTY9 493 aa12.11□□□□□ -0.47
SCN5A-208ENST00000450102 DDX27Q96GQ7 796 aaKnown RBP12.11□□□□□ -0.47
SCN5A-208ENST00000450102 SEPT10Q9P0V9 454 aa12.11□□□□□ -0.47
SCN5A-208ENST00000450102 FGD5Q6ZNL6 1462 aa12.11□□□□□ -0.47
SCN5A-208ENST00000450102 VWA3AA6NCI4 1184 aa12.11□□□□□ -0.47
SCN5A-208ENST00000450102 PRPF6O94906 941 aaKnown RBP12.11□□□□□ -0.47
SCN5A-208ENST00000450102 ABL1P00519 1130 aa12.11□□□□□ -0.47
SCN5A-208ENST00000450102 ZNF853P0CG23 659 aa12.11□□□□□ -0.47
SCN5A-208ENST00000450102 PRR16Q569H4 304 aa12.11□□□□□ -0.47
SCN5A-208ENST00000450102 LGSNQ5TDP6 509 aa12.11□□□□□ -0.47
SCN5A-208ENST00000450102 CTNND2Q9UQB3 1225 aa12.11□□□□□ -0.47
SCN5A-208ENST00000450102 LRRC9Q6ZRR7 1453 aa12.1□□□□□ -0.47
SCN5A-208ENST00000450102 PRKG1Q13976 671 aa12.1□□□□□ -0.47
SCN5A-208ENST00000450102 UTP14CQ5TAP6 766 aaKnown RBP12.1□□□□□ -0.47
SCN5A-208ENST00000450102 C4orf50Q6ZRC1 276 aa12.1□□□□□ -0.47
SCN5A-208ENST00000450102 HACE1Q8IYU2 909 aa12.1□□□□□ -0.47
SCN5A-208ENST00000450102 RUSC2Q8N2Y8 1516 aa12.1□□□□□ -0.47
SCN5A-208ENST00000450102 TUBB4AP04350 444 aa12.1□□□□□ -0.47
SCN5A-208ENST00000450102 RBBP5Q15291 538 aaKnown RBP12.1□□□□□ -0.47
SCN5A-208ENST00000450102 PSPC1Q8WXF1 523 aaKnown RBP12.1□□□□□ -0.47
SCN5A-208ENST00000450102 GIGYF1O75420 1035 aaPredicted RBP12.1□□□□□ -0.47
SCN5A-208ENST00000450102 STMN1P16949 149 aa12.1□□□□□ -0.47
SCN5A-208ENST00000450102 RXRAP19793 462 aa12.1□□□□□ -0.47
SCN5A-208ENST00000450102 ZNF174Q15697 407 aa12.1□□□□□ -0.47
SCN5A-208ENST00000450102 CADPS2Q86UW7 1296 aa12.1□□□□□ -0.47
SCN5A-208ENST00000450102 SLC39A6Q13433 755 aa12.1□□□□□ -0.47
SCN5A-208ENST00000450102 BMP2KLQ5H9B9 411 aa12.1□□□□□ -0.47
SCN5A-208ENST00000450102 GBP6Q6ZN66 633 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms