RNA–Protein interactions for RNA: ENST00000449339.1

AP000253.1-201, humanhuman

TSL 3 BASIC

Gene AP000253.1, Length 2,233 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000253.1-201ENST00000449339 DYNLL1P63167 89 aaKnown RBP18.9■□□□□ 0.62
AP000253.1-201ENST00000449339 TTC6Q86TZ1 520 aa18.9■□□□□ 0.62
AP000253.1-201ENST00000449339 RBM17Q96I25 401 aaKnown RBP18.9■□□□□ 0.62
AP000253.1-201ENST00000449339 KIF3AQ9Y496 699 aa18.9■□□□□ 0.62
AP000253.1-201ENST00000449339 TNS1Q9HBL0 1735 aaKnown RBP18.9■□□□□ 0.62
AP000253.1-201ENST00000449339 NEDD4P46934 1319 aa18.9■□□□□ 0.62
AP000253.1-201ENST00000449339 CHD4Q14839 1912 aa18.9■□□□□ 0.62
AP000253.1-201ENST00000449339 SEMA3EO15041 775 aa18.9■□□□□ 0.62
AP000253.1-201ENST00000449339 PPFIA3O75145 1194 aa18.9■□□□□ 0.62
AP000253.1-201ENST00000449339 CCDC173Q0VFZ6 552 aa18.9■□□□□ 0.62
AP000253.1-201ENST00000449339 TRDNQ13061 729 aa18.9■□□□□ 0.62
AP000253.1-201ENST00000449339 CYB5R4Q7L1T6 521 aa18.9■□□□□ 0.62
AP000253.1-201ENST00000449339 SCAND2PQ9GZW5 306 aaPredicted RBP18.9■□□□□ 0.62
AP000253.1-201ENST00000449339 ELP1O95163 1332 aa18.9■□□□□ 0.62
AP000253.1-201ENST00000449339 XDHP47989 1333 aa18.9■□□□□ 0.62
AP000253.1-201ENST00000449339 SALL1Q9NSC2 1324 aa18.9■□□□□ 0.62
AP000253.1-201ENST00000449339 ANKRD31Q8N7Z5 1873 aa18.89■□□□□ 0.62
AP000253.1-201ENST00000449339 MAGEB6P1A0A0J9YX57 407 aa18.89■□□□□ 0.61
AP000253.1-201ENST00000449339 NAA16Q6N069 864 aaPredicted RBP18.89■□□□□ 0.61
AP000253.1-201ENST00000449339 RAB11FIP4Q86YS3 637 aa18.89■□□□□ 0.61
AP000253.1-201ENST00000449339 SDR42E1Q8WUS8 393 aa18.89■□□□□ 0.61
AP000253.1-201ENST00000449339 ANO8Q9HCE9 1232 aaPredicted RBP18.89■□□□□ 0.61
AP000253.1-201ENST00000449339 WDR19Q8NEZ3 1342 aa18.89■□□□□ 0.61
AP000253.1-201ENST00000449339 B4E1Z4 1266 aa18.89■□□□□ 0.61
AP000253.1-201ENST00000449339 PRDX5P30044 214 aa18.89■□□□□ 0.61
AP000253.1-201ENST00000449339 TDO2P48775 406 aa18.89■□□□□ 0.61
AP000253.1-201ENST00000449339 STK11IPQ8N1F8 1099 aa18.89■□□□□ 0.61
AP000253.1-201ENST00000449339 TSPY26PQ9H489 355 aa18.89■□□□□ 0.61
AP000253.1-201ENST00000449339 ZSCAN16Q9H4T2 348 aaPredicted RBP18.89■□□□□ 0.61
AP000253.1-201ENST00000449339 LEMD3Q9Y2U8 911 aa18.89■□□□□ 0.61
AP000253.1-201ENST00000449339 MECOMQ03112 1051 aa18.88■□□□□ 0.61
AP000253.1-201ENST00000449339 RESTQ13127 1097 aa18.88■□□□□ 0.61
AP000253.1-201ENST00000449339 MSL1Q68DK7 614 aa18.88■□□□□ 0.61
AP000253.1-201ENST00000449339 NSUN4Q96CB9 384 aaKnown RBP18.88■□□□□ 0.61
AP000253.1-201ENST00000449339 RIOK1Q9BRS2 568 aaKnown RBP18.88■□□□□ 0.61
AP000253.1-201ENST00000449339 ZMYM6O95789 1325 aa18.88■□□□□ 0.61
AP000253.1-201ENST00000449339 GNAT2P19087 354 aa18.88■□□□□ 0.61
AP000253.1-201ENST00000449339 PPP1R9BQ96SB3 815 aa18.88■□□□□ 0.61
AP000253.1-201ENST00000449339 TFIP11Q9UBB9 837 aaKnown RBP18.88■□□□□ 0.61
AP000253.1-201ENST00000449339 KLF18A0A0U1RQI7 1052 aa18.87■□□□□ 0.61
AP000253.1-201ENST00000449339 LETM1O95202 739 aaPredicted RBP18.87■□□□□ 0.61
AP000253.1-201ENST00000449339 SPATA32Q96LK8 384 aa18.87■□□□□ 0.61
AP000253.1-201ENST00000449339 SMIM22K7EJ46 135 aa18.86■□□□□ 0.61
AP000253.1-201ENST00000449339 UFL1O94874 794 aa18.86■□□□□ 0.61
AP000253.1-201ENST00000449339 NLGN1Q8N2Q7 840 aa18.86■□□□□ 0.61
AP000253.1-201ENST00000449339 TRIM44Q96DX7 344 aaPredicted RBP18.86■□□□□ 0.61
AP000253.1-201ENST00000449339 NACAP1Q9BZK3 213 aa18.86■□□□□ 0.61
AP000253.1-201ENST00000449339 PDS5AQ29RF7 1337 aaKnown RBP18.86■□□□□ 0.61
AP000253.1-201ENST00000449339 BAZ2AQ9UIF9 1905 aaKnown RBP18.86■□□□□ 0.61
AP000253.1-201ENST00000449339 GOLGA8BA8MQT2 603 aa18.86■□□□□ 0.61
AP000253.1-201ENST00000449339 DHX16O60231 1041 aaKnown RBP18.86■□□□□ 0.61
AP000253.1-201ENST00000449339 HOXA10P31260 410 aaPredicted RBP18.86■□□□□ 0.61
AP000253.1-201ENST00000449339 FOSBP53539 338 aa18.86■□□□□ 0.61
AP000253.1-201ENST00000449339 SENP2Q9HC62 589 aa18.86■□□□□ 0.61
AP000253.1-201ENST00000449339 KLRG2A4D1S0 409 aaPredicted RBP18.85■□□□□ 0.61
AP000253.1-201ENST00000449339 MMP10P09238 476 aa18.85■□□□□ 0.61
AP000253.1-201ENST00000449339 RNF214Q8ND24 703 aa18.85■□□□□ 0.61
AP000253.1-201ENST00000449339 LEO1Q8WVC0 666 aaPredicted RBP18.85■□□□□ 0.61
AP000253.1-201ENST00000449339 HPS5Q9UPZ3 1129 aa18.85■□□□□ 0.61
AP000253.1-201ENST00000449339 HMGB2P26583 209 aaKnown RBP18.85■□□□□ 0.61
AP000253.1-201ENST00000449339 CCDC88AQ3V6T2 1871 aa18.84■□□□□ 0.61
AP000253.1-201ENST00000449339 TIAM2Q8IVF5 1701 aa18.84■□□□□ 0.61
AP000253.1-201ENST00000449339 BBOX1O75936 387 aa18.84■□□□□ 0.61
AP000253.1-201ENST00000449339 FDPSP14324 419 aaKnown RBP18.84■□□□□ 0.61
AP000253.1-201ENST00000449339 TDRD7Q8NHU6 1098 aaKnown RBP18.84■□□□□ 0.61
AP000253.1-201ENST00000449339 CRAMP1Q96RY5 1269 aa18.84■□□□□ 0.61
AP000253.1-201ENST00000449339 AATFQ9NY61 560 aaKnown RBP eCLIP18.84■□□□□ 0.61
AP000253.1-201ENST00000449339 ANGEL1Q9UNK9 670 aaKnown RBP18.84■□□□□ 0.61
AP000253.1-201ENST00000449339 MINDY4BA8MYZ0 360 aa18.84■□□□□ 0.61
AP000253.1-201ENST00000449339 KDM4AO75164 1064 aa18.84■□□□□ 0.61
AP000253.1-201ENST00000449339 GRIK5Q16478 980 aa18.84■□□□□ 0.61
AP000253.1-201ENST00000449339 RRP12Q5JTH9 1297 aaKnown RBP18.84■□□□□ 0.61
AP000253.1-201ENST00000449339 AKNAD1Q5T1N1 836 aa18.84■□□□□ 0.61
AP000253.1-201ENST00000449339 POLLQ9UGP5 575 aa18.84■□□□□ 0.61
AP000253.1-201ENST00000449339 GGA1Q9UJY5 639 aa18.84■□□□□ 0.61
AP000253.1-201ENST00000449339 NRXN2Q9P2S2 1712 aa18.84■□□□□ 0.61
AP000253.1-201ENST00000449339 CYP2D7A0A087X1C5 515 aa18.83■□□□□ 0.6
AP000253.1-201ENST00000449339 GOLGA6L4A6NEF3 574 aa18.83■□□□□ 0.6
AP000253.1-201ENST00000449339 SH2B2O14492 632 aaPredicted RBP18.83■□□□□ 0.6
AP000253.1-201ENST00000449339 ZNF804AQ7Z570 1209 aa18.83■□□□□ 0.6
AP000253.1-201ENST00000449339 TOMM22Q9NS69 142 aa18.83■□□□□ 0.6
AP000253.1-201ENST00000449339 CFAP45Q9UL16 551 aa18.83■□□□□ 0.6
AP000253.1-201ENST00000449339 PPARAQ07869 468 aa18.82■□□□□ 0.6
AP000253.1-201ENST00000449339 EZH2Q15910 746 aaKnown RBP18.82■□□□□ 0.6
AP000253.1-201ENST00000449339 OLFM4Q6UX06 510 aa18.82■□□□□ 0.6
AP000253.1-201ENST00000449339 MFSD6Q6ZSS7 791 aa18.82■□□□□ 0.6
AP000253.1-201ENST00000449339 BRIP1Q9BX63 1249 aa18.82■□□□□ 0.6
AP000253.1-201ENST00000449339 RRAGDQ9NQL2 400 aaPredicted RBP18.82■□□□□ 0.6
AP000253.1-201ENST00000449339 ZSWIM5Q9P217 1185 aa18.82■□□□□ 0.6
AP000253.1-201ENST00000449339 MAST2Q6P0Q8 1798 aa18.82■□□□□ 0.6
AP000253.1-201ENST00000449339 CPLX1O14810 134 aa18.82■□□□□ 0.6
AP000253.1-201ENST00000449339 ATP2B4P23634 1241 aa18.82■□□□□ 0.6
AP000253.1-201ENST00000449339 EN1Q05925 392 aaPredicted RBP18.82■□□□□ 0.6
AP000253.1-201ENST00000449339 FLAD1Q8NFF5 587 aa18.82■□□□□ 0.6
AP000253.1-201ENST00000449339 TBC1D16Q8TBP0 767 aa18.82■□□□□ 0.6
AP000253.1-201ENST00000449339 PPEF1O14829 653 aaPredicted RBP18.81■□□□□ 0.6
AP000253.1-201ENST00000449339 RXRAP19793 462 aa18.81■□□□□ 0.6
AP000253.1-201ENST00000449339 C15orf52Q6ZUT6 534 aaKnown RBP18.81■□□□□ 0.6
AP000253.1-201ENST00000449339 DZIP1Q86YF9 867 aaKnown RBP18.81■□□□□ 0.6
AP000253.1-201ENST00000449339 KLHL34Q8N239 644 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms