RNA–Protein interactions for RNA: ENST00000448935.6

VIPAS39-203, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,623 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-203ENST00000448935 RAI14Q9P0K7 980 aa12.48□□□□□ -0.41
VIPAS39-203ENST00000448935 ANKIB1Q9P2G1 1089 aa12.48□□□□□ -0.41
VIPAS39-203ENST00000448935 ABCF2Q9UG63 623 aa12.48□□□□□ -0.41
VIPAS39-203ENST00000448935 KIF3AQ9Y496 699 aa12.48□□□□□ -0.41
VIPAS39-203ENST00000448935 CCDC88AQ3V6T2 1871 aa12.47□□□□□ -0.41
VIPAS39-203ENST00000448935 MAST2Q6P0Q8 1798 aa12.47□□□□□ -0.41
VIPAS39-203ENST00000448935 ZSCAN22P10073 491 aaPredicted RBP12.47□□□□□ -0.41
VIPAS39-203ENST00000448935 SYT1P21579 422 aa12.47□□□□□ -0.41
VIPAS39-203ENST00000448935 HOXA10P31260 410 aaPredicted RBP12.47□□□□□ -0.41
VIPAS39-203ENST00000448935 MLLT3P42568 568 aaPredicted RBP12.47□□□□□ -0.41
VIPAS39-203ENST00000448935 SPTY2D1Q68D10 685 aaPredicted RBP12.47□□□□□ -0.41
VIPAS39-203ENST00000448935 C15orf52Q6ZUT6 534 aaKnown RBP12.47□□□□□ -0.41
VIPAS39-203ENST00000448935 NECAB1Q8N987 351 aa12.47□□□□□ -0.41
VIPAS39-203ENST00000448935 GTF3C6Q969F1 213 aa12.47□□□□□ -0.41
VIPAS39-203ENST00000448935 ZNF274Q96GC6 653 aaPredicted RBP12.47□□□□□ -0.41
VIPAS39-203ENST00000448935 CRAMP1Q96RY5 1269 aa12.47□□□□□ -0.41
VIPAS39-203ENST00000448935 CHD4Q14839 1912 aa12.47□□□□□ -0.41
VIPAS39-203ENST00000448935 NRXN2Q9P2S2 1712 aa12.46□□□□□ -0.41
VIPAS39-203ENST00000448935 DUOX1Q9NRD9 1551 aa12.46□□□□□ -0.41
VIPAS39-203ENST00000448935 KLRG2A4D1S0 409 aaPredicted RBP12.46□□□□□ -0.41
VIPAS39-203ENST00000448935 PFKFB2O60825 505 aa12.46□□□□□ -0.41
VIPAS39-203ENST00000448935 CYP7A1P22680 504 aa12.46□□□□□ -0.41
VIPAS39-203ENST00000448935 ATP2B4P23634 1241 aa12.46□□□□□ -0.41
VIPAS39-203ENST00000448935 HAND2P61296 217 aa12.46□□□□□ -0.41
VIPAS39-203ENST00000448935 IFNL3Q8IZI9 196 aa12.46□□□□□ -0.41
VIPAS39-203ENST00000448935 CNNM2Q9H8M5 875 aa12.46□□□□□ -0.41
VIPAS39-203ENST00000448935 MAGEB6P1A0A0J9YX57 407 aa12.45□□□□□ -0.42
VIPAS39-203ENST00000448935 EVCP57679 992 aa12.45□□□□□ -0.42
VIPAS39-203ENST00000448935 HMGN5P82970 282 aaKnown RBP12.45□□□□□ -0.42
VIPAS39-203ENST00000448935 DDR1Q08345 913 aa12.45□□□□□ -0.42
VIPAS39-203ENST00000448935 KLHL40Q2TBA0 621 aa12.45□□□□□ -0.42
VIPAS39-203ENST00000448935 NAA16Q6N069 864 aaPredicted RBP12.45□□□□□ -0.42
VIPAS39-203ENST00000448935 ZNF804AQ7Z570 1209 aa12.45□□□□□ -0.42
VIPAS39-203ENST00000448935 MB21D2Q8IYB1 491 aaPredicted RBP12.45□□□□□ -0.42
VIPAS39-203ENST00000448935 BRIP1Q9BX63 1249 aa12.45□□□□□ -0.42
VIPAS39-203ENST00000448935 KDM4CQ9H3R0 1056 aa12.45□□□□□ -0.42
VIPAS39-203ENST00000448935 IQSEC3Q9UPP2 1182 aaPredicted RBP12.45□□□□□ -0.42
VIPAS39-203ENST00000448935 SLC4A4Q9Y6R1 1079 aa12.45□□□□□ -0.42
VIPAS39-203ENST00000448935 TIAM2Q8IVF5 1701 aa12.45□□□□□ -0.42
VIPAS39-203ENST00000448935 KIAA1551Q9HCM1 1747 aa12.45□□□□□ -0.42
VIPAS39-203ENST00000448935 CACNA1SQ13698 1873 aa12.45□□□□□ -0.42
VIPAS39-203ENST00000448935 COL1A1P02452 1464 aaPredicted RBP12.45□□□□□ -0.42
VIPAS39-203ENST00000448935 PRC1O43663 620 aa12.44□□□□□ -0.42
VIPAS39-203ENST00000448935 DHX16O60231 1041 aaKnown RBP12.44□□□□□ -0.42
VIPAS39-203ENST00000448935 F13A1P00488 732 aa12.44□□□□□ -0.42
VIPAS39-203ENST00000448935 TDO2P48775 406 aa12.44□□□□□ -0.42
VIPAS39-203ENST00000448935 ST3GAL1Q11201 340 aa12.44□□□□□ -0.42
VIPAS39-203ENST00000448935 STK3Q13188 491 aa12.44□□□□□ -0.42
VIPAS39-203ENST00000448935 ZNF827Q17R98 1081 aa12.44□□□□□ -0.42
VIPAS39-203ENST00000448935 CSPP1Q1MSJ5 1256 aa12.44□□□□□ -0.42
VIPAS39-203ENST00000448935 LARP1BQ659C4 914 aaKnown RBP12.44□□□□□ -0.42
VIPAS39-203ENST00000448935 WDR66Q8TBY9 1149 aa12.44□□□□□ -0.42
VIPAS39-203ENST00000448935 KRT23Q9C075 422 aa12.44□□□□□ -0.42
VIPAS39-203ENST00000448935 ARMT1Q9H993 441 aa12.44□□□□□ -0.42
VIPAS39-203ENST00000448935 DDX49Q9Y6V7 483 aaKnown RBP12.44□□□□□ -0.42
VIPAS39-203ENST00000448935 SALL1Q9NSC2 1324 aa12.44□□□□□ -0.42
VIPAS39-203ENST00000448935 GSG1L2A8MUP6 293 aa12.44□□□□□ -0.42
VIPAS39-203ENST00000448935 NCLP19338 710 aaKnown RBP12.44□□□□□ -0.42
VIPAS39-203ENST00000448935 COL9A3Q14050 684 aaPredicted RBP12.44□□□□□ -0.42
VIPAS39-203ENST00000448935 GIMAP6Q6P9H5 292 aa12.44□□□□□ -0.42
VIPAS39-203ENST00000448935 COL23A1Q86Y22 540 aaPredicted RBP12.44□□□□□ -0.42
VIPAS39-203ENST00000448935 TMEM87BQ96K49 555 aa12.44□□□□□ -0.42
VIPAS39-203ENST00000448935 MTA3Q9BTC8 594 aa12.44□□□□□ -0.42
VIPAS39-203ENST00000448935 RNF41Q9H4P4 317 aaPredicted RBP12.44□□□□□ -0.42
VIPAS39-203ENST00000448935 LMBRD1Q9NUN5 540 aa12.44□□□□□ -0.42
VIPAS39-203ENST00000448935 PODXL2Q9NZ53 605 aa12.44□□□□□ -0.42
VIPAS39-203ENST00000448935 GGA1Q9UJY5 639 aa12.44□□□□□ -0.42
VIPAS39-203ENST00000448935 ISY1Q9ULR0 285 aaKnown RBP12.44□□□□□ -0.42
VIPAS39-203ENST00000448935 PARP3Q9Y6F1 533 aa12.44□□□□□ -0.42
VIPAS39-203ENST00000448935 IRS2Q9Y4H2 1338 aa12.44□□□□□ -0.42
VIPAS39-203ENST00000448935 LRRC37AA6NMS7 1700 aa12.43□□□□□ -0.42
VIPAS39-203ENST00000448935 A0A0G2JLW4 131 aa12.43□□□□□ -0.42
VIPAS39-203ENST00000448935 MBD3O95983 291 aa12.43□□□□□ -0.42
VIPAS39-203ENST00000448935 FXR2P51116 673 aaKnown RBP eCLIP12.43□□□□□ -0.42
VIPAS39-203ENST00000448935 APOBRQ0VD83 1088 aa12.43□□□□□ -0.42
VIPAS39-203ENST00000448935 FOXD4L5Q5VV16 416 aaPredicted RBP12.43□□□□□ -0.42
VIPAS39-203ENST00000448935 LCORLQ8N3X6 602 aa12.43□□□□□ -0.42
VIPAS39-203ENST00000448935 FAM184AQ8NB25 1140 aa12.43□□□□□ -0.42
VIPAS39-203ENST00000448935 FOXD4L4Q8WXT5 416 aaPredicted RBP12.43□□□□□ -0.42
VIPAS39-203ENST00000448935 LRRC2Q9BYS8 371 aa12.43□□□□□ -0.42
VIPAS39-203ENST00000448935 QSER1Q2KHR3 1735 aa12.42□□□□□ -0.42
VIPAS39-203ENST00000448935 ANKRD31Q8N7Z5 1873 aa12.42□□□□□ -0.42
VIPAS39-203ENST00000448935 PCP11498 1178 aaKnown RBP12.42□□□□□ -0.42
VIPAS39-203ENST00000448935 KLRK1P26718 216 aa12.42□□□□□ -0.42
VIPAS39-203ENST00000448935 PDE6BP35913 854 aa12.42□□□□□ -0.42
VIPAS39-203ENST00000448935 SCRN1Q12765 414 aa12.42□□□□□ -0.42
VIPAS39-203ENST00000448935 AKNAD1Q5T1N1 836 aa12.42□□□□□ -0.42
VIPAS39-203ENST00000448935 MFSD6Q6ZSS7 791 aa12.42□□□□□ -0.42
VIPAS39-203ENST00000448935 TDRD7Q8NHU6 1098 aaKnown RBP12.42□□□□□ -0.42
VIPAS39-203ENST00000448935 SMARCC2Q8TAQ2 1214 aa12.42□□□□□ -0.42
VIPAS39-203ENST00000448935 NSUN4Q96CB9 384 aaKnown RBP12.42□□□□□ -0.42
VIPAS39-203ENST00000448935 EPB41L4AQ9HCS5 686 aaPredicted RBP12.42□□□□□ -0.42
VIPAS39-203ENST00000448935 NSFL1CQ9UNZ2 370 aaKnown RBP12.42□□□□□ -0.42
VIPAS39-203ENST00000448935 MTMR6Q9Y217 621 aa12.42□□□□□ -0.42
VIPAS39-203ENST00000448935 VPS37CA5D8V6 355 aaPredicted RBP12.41□□□□□ -0.42
VIPAS39-203ENST00000448935 WTIPA6NIX2 430 aaPredicted RBP12.41□□□□□ -0.42
VIPAS39-203ENST00000448935 PRPF40AO75400 957 aaKnown RBP12.41□□□□□ -0.42
VIPAS39-203ENST00000448935 UFL1O94874 794 aa12.41□□□□□ -0.42
VIPAS39-203ENST00000448935 NPR1P16066 1061 aa12.41□□□□□ -0.42
VIPAS39-203ENST00000448935 PDIA3P30101 505 aaKnown RBP12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms