RNA–Protein interactions for RNA: ENST00000448611.6

LMNA-208, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 1,943 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-208ENST00000448611 USP48Q86UV5 1035 aa20.84■□□□□ 0.93
LMNA-208ENST00000448611 TDRD7Q8NHU6 1098 aaKnown RBP20.84■□□□□ 0.93
LMNA-208ENST00000448611 CHMP4CQ96CF2 233 aa20.84■□□□□ 0.93
LMNA-208ENST00000448611 GDPD2Q9HCC8 539 aa20.84■□□□□ 0.93
LMNA-208ENST00000448611 KLF18A0A0U1RQI7 1052 aa20.84■□□□□ 0.93
LMNA-208ENST00000448611 PTPDC1A2A3K4 754 aa20.84■□□□□ 0.93
LMNA-208ENST00000448611 HMGN5P82970 282 aaKnown RBP20.84■□□□□ 0.93
LMNA-208ENST00000448611 TMED8Q6PL24 325 aaPredicted RBP20.84■□□□□ 0.93
LMNA-208ENST00000448611 DDX11Q96FC9 970 aa20.84■□□□□ 0.93
LMNA-208ENST00000448611 INCENPQ9NQS7 918 aa20.84■□□□□ 0.93
LMNA-208ENST00000448611 NAP1L2Q9ULW6 460 aaPredicted RBP20.84■□□□□ 0.93
LMNA-208ENST00000448611 HPS5Q9UPZ3 1129 aa20.84■□□□□ 0.93
LMNA-208ENST00000448611 MAST2Q6P0Q8 1798 aa20.83■□□□□ 0.93
LMNA-208ENST00000448611 SH2B2O14492 632 aaPredicted RBP20.83■□□□□ 0.93
LMNA-208ENST00000448611 MBD3O95983 291 aa20.83■□□□□ 0.93
LMNA-208ENST00000448611 NCLP19338 710 aaKnown RBP20.83■□□□□ 0.93
LMNA-208ENST00000448611 ATP2B4P23634 1241 aa20.83■□□□□ 0.93
LMNA-208ENST00000448611 PRDX5P30044 214 aa20.83■□□□□ 0.93
LMNA-208ENST00000448611 DYNLL1P63167 89 aaKnown RBP20.83■□□□□ 0.93
LMNA-208ENST00000448611 ANKRD31Q8N7Z5 1873 aa20.83■□□□□ 0.93
LMNA-208ENST00000448611 SDR42E1Q8WUS8 393 aa20.83■□□□□ 0.93
LMNA-208ENST00000448611 STAG1Q8WVM7 1258 aa20.83■□□□□ 0.93
LMNA-208ENST00000448611 ANGEL1Q9UNK9 670 aaKnown RBP20.83■□□□□ 0.93
LMNA-208ENST00000448611 NSFL1CQ9UNZ2 370 aaKnown RBP20.83■□□□□ 0.93
LMNA-208ENST00000448611 GOLGA6L3A6NEY3 463 aa20.82■□□□□ 0.92
LMNA-208ENST00000448611 CAVIN1Q6NZI2 390 aaKnown RBP20.82■□□□□ 0.92
LMNA-208ENST00000448611 BRIP1Q9BX63 1249 aa20.82■□□□□ 0.92
LMNA-208ENST00000448611 CNNM2Q9H8M5 875 aa20.82■□□□□ 0.92
LMNA-208ENST00000448611 PODXL2Q9NZ53 605 aa20.82■□□□□ 0.92
LMNA-208ENST00000448611 DNM1Q05193 864 aaKnown RBP20.82■□□□□ 0.92
LMNA-208ENST00000448611 ZNF804AQ7Z570 1209 aa20.82■□□□□ 0.92
LMNA-208ENST00000448611 TMEM87BQ96K49 555 aa20.82■□□□□ 0.92
LMNA-208ENST00000448611 TCHHQ07283 1943 aa20.82■□□□□ 0.92
LMNA-208ENST00000448611 CHD4Q14839 1912 aa20.82■□□□□ 0.92
LMNA-208ENST00000448611 GOLGA8BA8MQT2 603 aa20.81■□□□□ 0.92
LMNA-208ENST00000448611 IGSF3O75054 1194 aa20.81■□□□□ 0.92
LMNA-208ENST00000448611 UFL1O94874 794 aa20.81■□□□□ 0.92
LMNA-208ENST00000448611 MFSD6Q6ZSS7 791 aa20.81■□□□□ 0.92
LMNA-208ENST00000448611 FAM184AQ8NB25 1140 aa20.81■□□□□ 0.92
LMNA-208ENST00000448611 IGDCC4Q8TDY8 1250 aa20.81■□□□□ 0.92
LMNA-208ENST00000448611 GPR101Q96P66 508 aaPredicted RBP20.81■□□□□ 0.92
LMNA-208ENST00000448611 KRT23Q9C075 422 aa20.81■□□□□ 0.92
LMNA-208ENST00000448611 PDGFDQ9GZP0 370 aaPredicted RBP20.81■□□□□ 0.92
LMNA-208ENST00000448611 GGA1Q9UJY5 639 aa20.81■□□□□ 0.92
LMNA-208ENST00000448611 JAG2Q9Y219 1238 aa20.81■□□□□ 0.92
LMNA-208ENST00000448611 LRRC37AA6NMS7 1700 aa20.81■□□□□ 0.92
LMNA-208ENST00000448611 PPARAQ07869 468 aa20.8■□□□□ 0.92
LMNA-208ENST00000448611 R3HDM1Q15032 1099 aaKnown RBP20.8■□□□□ 0.92
LMNA-208ENST00000448611 SPTY2D1Q68D10 685 aaPredicted RBP20.8■□□□□ 0.92
LMNA-208ENST00000448611 FERMT3Q86UX7 667 aa20.8■□□□□ 0.92
LMNA-208ENST00000448611 WDR66Q8TBY9 1149 aa20.8■□□□□ 0.92
LMNA-208ENST00000448611 ANAPC4Q9UJX5 808 aa20.8■□□□□ 0.92
LMNA-208ENST00000448611 ISY1Q9ULR0 285 aaKnown RBP20.8■□□□□ 0.92
LMNA-208ENST00000448611 KDM4AO75164 1064 aa20.8■□□□□ 0.92
LMNA-208ENST00000448611 GADD45BO75293 160 aaPredicted RBP20.8■□□□□ 0.92
LMNA-208ENST00000448611 L1TD1Q5T7N2 865 aaKnown RBP20.8■□□□□ 0.92
LMNA-208ENST00000448611 TMC4Q7Z404 712 aa20.8■□□□□ 0.92
LMNA-208ENST00000448611 ZSWIM5Q9P217 1185 aa20.8■□□□□ 0.92
LMNA-208ENST00000448611 LTBP1Q14766 1721 aa20.79■□□□□ 0.92
LMNA-208ENST00000448611 GIMAP6Q6P9H5 292 aa20.79■□□□□ 0.92
LMNA-208ENST00000448611 KIF3AQ9Y496 699 aa20.79■□□□□ 0.92
LMNA-208ENST00000448611 QSER1Q2KHR3 1735 aa20.79■□□□□ 0.92
LMNA-208ENST00000448611 MMP10P09238 476 aa20.78■□□□□ 0.92
LMNA-208ENST00000448611 FDPSP14324 419 aaKnown RBP20.78■□□□□ 0.92
LMNA-208ENST00000448611 SGMS1Q86VZ5 419 aa20.78■□□□□ 0.92
LMNA-208ENST00000448611 GAS2L3Q86XJ1 694 aa20.78■□□□□ 0.92
LMNA-208ENST00000448611 RNF41Q9H4P4 317 aaPredicted RBP20.78■□□□□ 0.92
LMNA-208ENST00000448611 LY9Q9HBG7 655 aa20.78■□□□□ 0.92
LMNA-208ENST00000448611 SENP2Q9HC62 589 aa20.78■□□□□ 0.92
LMNA-208ENST00000448611 POLLQ9UGP5 575 aa20.78■□□□□ 0.92
LMNA-208ENST00000448611 KIAA1551Q9HCM1 1747 aa20.78■□□□□ 0.92
LMNA-208ENST00000448611 CCDC88AQ3V6T2 1871 aa20.78■□□□□ 0.92
LMNA-208ENST00000448611 FIBPO43427 364 aa20.78■□□□□ 0.92
LMNA-208ENST00000448611 DHX16O60231 1041 aaKnown RBP20.78■□□□□ 0.92
LMNA-208ENST00000448611 SRGNP10124 158 aa20.78■□□□□ 0.92
LMNA-208ENST00000448611 ZSCAN23Q3MJ62 389 aa20.78■□□□□ 0.92
LMNA-208ENST00000448611 SP8Q8IXZ3 490 aa20.78■□□□□ 0.92
LMNA-208ENST00000448611 TBC1D16Q8TBP0 767 aa20.78■□□□□ 0.92
LMNA-208ENST00000448611 CD209Q9NNX6 404 aa20.78■□□□□ 0.92
LMNA-208ENST00000448611 RBM27Q9P2N5 1060 aaKnown RBP20.78■□□□□ 0.92
LMNA-208ENST00000448611 PSDA5PKW4 1024 aaPredicted RBP20.77■□□□□ 0.92
LMNA-208ENST00000448611 PPEF1O14829 653 aaPredicted RBP20.77■□□□□ 0.92
LMNA-208ENST00000448611 IL1R1P14778 569 aa20.77■□□□□ 0.92
LMNA-208ENST00000448611 LIFRP42702 1097 aa20.77■□□□□ 0.92
LMNA-208ENST00000448611 ZNF445P59923 1031 aa20.77■□□□□ 0.92
LMNA-208ENST00000448611 RESTQ13127 1097 aa20.77■□□□□ 0.92
LMNA-208ENST00000448611 DZIP1Q86YF9 867 aaKnown RBP20.77■□□□□ 0.92
LMNA-208ENST00000448611 AATFQ9NY61 560 aaKnown RBP eCLIP20.77■□□□□ 0.92
LMNA-208ENST00000448611 TMEM63CQ9P1W3 806 aa20.77■□□□□ 0.92
LMNA-208ENST00000448611 H3BQV1 296 aa20.76■□□□□ 0.91
LMNA-208ENST00000448611 TMEM67Q5HYA8 995 aa20.76■□□□□ 0.91
LMNA-208ENST00000448611 IFFO2Q5TF58 517 aa20.76■□□□□ 0.91
LMNA-208ENST00000448611 MSL1Q68DK7 614 aa20.76■□□□□ 0.91
LMNA-208ENST00000448611 FAM173BQ6P4H8 233 aa20.76■□□□□ 0.91
LMNA-208ENST00000448611 APOA5Q6Q788 366 aa20.76■□□□□ 0.91
LMNA-208ENST00000448611 MINDY4BA8MYZ0 360 aa20.76■□□□□ 0.91
LMNA-208ENST00000448611 SOCS7O14512 581 aa20.76■□□□□ 0.91
LMNA-208ENST00000448611 LDHBP07195 334 aaKnown RBP20.76■□□□□ 0.91
LMNA-208ENST00000448611 CSPP1Q1MSJ5 1256 aa20.76■□□□□ 0.91
LMNA-208ENST00000448611 RAB11FIP4Q86YS3 637 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms