RNA–Protein interactions for RNA: ENST00000447839.6

ERCC6-203, Transcript of ERCC excision repair 6, chromatin remodeling factor, humanhuman

TSL 2 BASIC

Gene ERCC6, Length 3,411 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6-203ENST00000447839 AATFQ9NY61 560 aaKnown RBP eCLIP13.75□□□□□ -0.21
ERCC6-203ENST00000447839 ZSCAN23Q3MJ62 389 aa13.75□□□□□ -0.21
ERCC6-203ENST00000447839 ZNF804AQ7Z570 1209 aa13.75□□□□□ -0.21
ERCC6-203ENST00000447839 NSUN4Q96CB9 384 aaKnown RBP13.75□□□□□ -0.21
ERCC6-203ENST00000447839 DHX16O60231 1041 aaKnown RBP13.74□□□□□ -0.21
ERCC6-203ENST00000447839 CSPP1Q1MSJ5 1256 aa13.74□□□□□ -0.21
ERCC6-203ENST00000447839 TMEM67Q5HYA8 995 aa13.74□□□□□ -0.21
ERCC6-203ENST00000447839 MSL1Q68DK7 614 aa13.74□□□□□ -0.21
ERCC6-203ENST00000447839 SMARCC2Q8TAQ2 1214 aa13.74□□□□□ -0.21
ERCC6-203ENST00000447839 CNNM2Q9H8M5 875 aa13.74□□□□□ -0.21
ERCC6-203ENST00000447839 GGA1Q9UJY5 639 aa13.74□□□□□ -0.21
ERCC6-203ENST00000447839 IFIT3O14879 490 aaKnown RBP13.74□□□□□ -0.21
ERCC6-203ENST00000447839 RXRAP19793 462 aa13.74□□□□□ -0.21
ERCC6-203ENST00000447839 FBXL16Q8N461 479 aa13.74□□□□□ -0.21
ERCC6-203ENST00000447839 RIOK1Q9BRS2 568 aaKnown RBP13.74□□□□□ -0.21
ERCC6-203ENST00000447839 KRT23Q9C075 422 aa13.74□□□□□ -0.21
ERCC6-203ENST00000447839 ZSWIM5Q9P217 1185 aa13.74□□□□□ -0.21
ERCC6-203ENST00000447839 ZMYM6O95789 1325 aa13.74□□□□□ -0.21
ERCC6-203ENST00000447839 DOCK2Q92608 1830 aa13.74□□□□□ -0.21
ERCC6-203ENST00000447839 C6orf229H3BNL8 230 aa13.74□□□□□ -0.21
ERCC6-203ENST00000447839 KRT85P78386 507 aa13.74□□□□□ -0.21
ERCC6-203ENST00000447839 GUCY1B3Q02153 619 aa13.74□□□□□ -0.21
ERCC6-203ENST00000447839 PPARAQ07869 468 aa13.74□□□□□ -0.21
ERCC6-203ENST00000447839 GAS2L3Q86XJ1 694 aa13.74□□□□□ -0.21
ERCC6-203ENST00000447839 ZNF384Q8TF68 577 aa13.74□□□□□ -0.21
ERCC6-203ENST00000447839 ZKSCAN3Q9BRR0 538 aa13.74□□□□□ -0.21
ERCC6-203ENST00000447839 FSD2A1L4K1 749 aa13.73□□□□□ -0.21
ERCC6-203ENST00000447839 BBOX1O75936 387 aa13.73□□□□□ -0.21
ERCC6-203ENST00000447839 SPTY2D1Q68D10 685 aaPredicted RBP13.73□□□□□ -0.21
ERCC6-203ENST00000447839 MICU3Q86XE3 530 aa13.73□□□□□ -0.21
ERCC6-203ENST00000447839 CCDC144CPQ8IYA2 1237 aa13.73□□□□□ -0.21
ERCC6-203ENST00000447839 TMEM63CQ9P1W3 806 aa13.73□□□□□ -0.21
ERCC6-203ENST00000447839 TFIP11Q9UBB9 837 aaKnown RBP13.73□□□□□ -0.21
ERCC6-203ENST00000447839 WDR19Q8NEZ3 1342 aa13.73□□□□□ -0.21
ERCC6-203ENST00000447839 AKT1S1Q96B36 256 aa13.73□□□□□ -0.21
ERCC6-203ENST00000447839 TMEM87BQ96K49 555 aa13.73□□□□□ -0.21
ERCC6-203ENST00000447839 A0A1B0GUL6 1792 aa13.73□□□□□ -0.21
ERCC6-203ENST00000447839 TCHHQ07283 1943 aa13.73□□□□□ -0.21
ERCC6-203ENST00000447839 SH2B2O14492 632 aaPredicted RBP13.73□□□□□ -0.21
ERCC6-203ENST00000447839 EVCP57679 992 aa13.73□□□□□ -0.21
ERCC6-203ENST00000447839 RNF41Q9H4P4 317 aaPredicted RBP13.73□□□□□ -0.21
ERCC6-203ENST00000447839 ERICH2A1L162 156 aa13.72□□□□□ -0.21
ERCC6-203ENST00000447839 LDHBP07195 334 aaKnown RBP13.72□□□□□ -0.21
ERCC6-203ENST00000447839 MMP10P09238 476 aa13.72□□□□□ -0.21
ERCC6-203ENST00000447839 ATP2B4P23634 1241 aa13.72□□□□□ -0.21
ERCC6-203ENST00000447839 METAP2P50579 478 aaKnown RBP eCLIP13.72□□□□□ -0.21
ERCC6-203ENST00000447839 WDR66Q8TBY9 1149 aa13.72□□□□□ -0.21
ERCC6-203ENST00000447839 GRPEL1Q9HAV7 217 aa13.72□□□□□ -0.21
ERCC6-203ENST00000447839 SENP2Q9HC62 589 aa13.72□□□□□ -0.21
ERCC6-203ENST00000447839 PARP3Q9Y6F1 533 aa13.72□□□□□ -0.21
ERCC6-203ENST00000447839 CYP2D7A0A087X1C5 515 aa13.72□□□□□ -0.21
ERCC6-203ENST00000447839 CCDC69A6NI79 296 aa13.72□□□□□ -0.21
ERCC6-203ENST00000447839 MRE11P49959 708 aa13.72□□□□□ -0.21
ERCC6-203ENST00000447839 SART3Q15020 963 aaKnown RBP13.72□□□□□ -0.21
ERCC6-203ENST00000447839 SYAP1Q96A49 352 aaPredicted RBP13.72□□□□□ -0.21
ERCC6-203ENST00000447839 MYL10Q9BUA6 226 aa13.72□□□□□ -0.21
ERCC6-203ENST00000447839 HPS5Q9UPZ3 1129 aa13.72□□□□□ -0.21
ERCC6-203ENST00000447839 XRCC6P12956 609 aaKnown RBP eCLIP13.71□□□□□ -0.21
ERCC6-203ENST00000447839 FLAD1Q8NFF5 587 aa13.71□□□□□ -0.21
ERCC6-203ENST00000447839 STAG1Q8WVM7 1258 aa13.71□□□□□ -0.21
ERCC6-203ENST00000447839 CRNKL1Q9BZJ0 848 aaKnown RBP13.71□□□□□ -0.21
ERCC6-203ENST00000447839 ORC3Q9UBD5 711 aaPredicted RBP13.71□□□□□ -0.21
ERCC6-203ENST00000447839 TACC3Q9Y6A5 838 aa13.71□□□□□ -0.21
ERCC6-203ENST00000447839 PDS5AQ29RF7 1337 aaKnown RBP13.71□□□□□ -0.21
ERCC6-203ENST00000447839 SYCE3A1L190 88 aa13.71□□□□□ -0.21
ERCC6-203ENST00000447839 UBE2HP62256 183 aa13.71□□□□□ -0.21
ERCC6-203ENST00000447839 SYNE3Q6ZMZ3 975 aa13.71□□□□□ -0.21
ERCC6-203ENST00000447839 SLC12A7Q9Y666 1083 aa13.71□□□□□ -0.21
ERCC6-203ENST00000447839 ZBTB43O43298 467 aa13.71□□□□□ -0.22
ERCC6-203ENST00000447839 ADD1P35611 737 aaKnown RBP13.71□□□□□ -0.22
ERCC6-203ENST00000447839 SLC4A8Q2Y0W8 1093 aa13.71□□□□□ -0.22
ERCC6-203ENST00000447839 TMEM87AQ8NBN3 555 aa13.71□□□□□ -0.22
ERCC6-203ENST00000447839 TDRD7Q8NHU6 1098 aaKnown RBP13.71□□□□□ -0.22
ERCC6-203ENST00000447839 IGDCC4Q8TDY8 1250 aa13.71□□□□□ -0.22
ERCC6-203ENST00000447839 CRAMP1Q96RY5 1269 aa13.71□□□□□ -0.22
ERCC6-203ENST00000447839 BRIP1Q9BX63 1249 aa13.71□□□□□ -0.22
ERCC6-203ENST00000447839 USP17L12C9JPN9 530 aa13.7□□□□□ -0.22
ERCC6-203ENST00000447839 USP17L21D6R901 530 aa13.7□□□□□ -0.22
ERCC6-203ENST00000447839 SMIM22K7EJ46 135 aa13.7□□□□□ -0.22
ERCC6-203ENST00000447839 PPEF1O14829 653 aaPredicted RBP13.7□□□□□ -0.22
ERCC6-203ENST00000447839 HOXA10P31260 410 aaPredicted RBP13.7□□□□□ -0.22
ERCC6-203ENST00000447839 APOA5Q6Q788 366 aa13.7□□□□□ -0.22
ERCC6-203ENST00000447839 UBAC1Q9BSL1 405 aa13.7□□□□□ -0.22
ERCC6-203ENST00000447839 GOLGA6L4A6NEF3 574 aa13.7□□□□□ -0.22
ERCC6-203ENST00000447839 CEBPZQ03701 1054 aaKnown RBP13.7□□□□□ -0.22
ERCC6-203ENST00000447839 CPLX2Q6PUV4 134 aaKnown RBP13.7□□□□□ -0.22
ERCC6-203ENST00000447839 LY9Q9HBG7 655 aa13.7□□□□□ -0.22
ERCC6-203ENST00000447839 CD209Q9NNX6 404 aa13.7□□□□□ -0.22
ERCC6-203ENST00000447839 ISY1Q9ULR0 285 aaKnown RBP13.7□□□□□ -0.22
ERCC6-203ENST00000447839 IRS2Q9Y4H2 1338 aa13.7□□□□□ -0.22
ERCC6-203ENST00000447839 GOLGA8AA7E2F4 631 aa13.7□□□□□ -0.22
ERCC6-203ENST00000447839 RIMBP2O15034 1052 aa13.7□□□□□ -0.22
ERCC6-203ENST00000447839 RANBP6O60518 1105 aaKnown RBP13.7□□□□□ -0.22
ERCC6-203ENST00000447839 PRDM1O75626 825 aa13.7□□□□□ -0.22
ERCC6-203ENST00000447839 WTAPQ15007 396 aa13.7□□□□□ -0.22
ERCC6-203ENST00000447839 SPATA32Q96LK8 384 aa13.7□□□□□ -0.22
ERCC6-203ENST00000447839 ZSCAN16Q9H4T2 348 aaPredicted RBP13.7□□□□□ -0.22
ERCC6-203ENST00000447839 POLLQ9UGP5 575 aa13.7□□□□□ -0.22
ERCC6-203ENST00000447839 FDPSP14324 419 aaKnown RBP13.69□□□□□ -0.22
ERCC6-203ENST00000447839 DIXDC1Q155Q3 683 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms