RNA–Protein interactions for RNA: ENST00000447098.6

PTCH2-203, Transcript of patched 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTCH2, Length 4,298 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2-203ENST00000447098 UBXN4Q92575 508 aa12.99□□□□□ -0.33
PTCH2-203ENST00000447098 CLSTN2Q9H4D0 955 aa12.99□□□□□ -0.33
PTCH2-203ENST00000447098 VEZTQ9HBM0 779 aa12.99□□□□□ -0.33
PTCH2-203ENST00000447098 DDX41Q9UJV9 622 aaKnown RBP12.99□□□□□ -0.33
PTCH2-203ENST00000447098 MROH5Q6ZUA9 1318 aa12.99□□□□□ -0.33
PTCH2-203ENST00000447098 PDE4CQ08493 712 aa12.99□□□□□ -0.33
PTCH2-203ENST00000447098 DPP8Q6V1X1 898 aaPredicted RBP12.99□□□□□ -0.33
PTCH2-203ENST00000447098 ZNF589Q86UQ0 364 aaPredicted RBP12.99□□□□□ -0.33
PTCH2-203ENST00000447098 ERO1AQ96HE7 468 aa12.99□□□□□ -0.33
PTCH2-203ENST00000447098 IL25Q9H293 177 aa12.99□□□□□ -0.33
PTCH2-203ENST00000447098 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.98□□□□□ -0.33
PTCH2-203ENST00000447098 SERPINB2P05120 415 aa12.98□□□□□ -0.33
PTCH2-203ENST00000447098 SYCP1Q15431 976 aa12.98□□□□□ -0.33
PTCH2-203ENST00000447098 ADCK5Q3MIX3 580 aa12.98□□□□□ -0.33
PTCH2-203ENST00000447098 DHX32Q7L7V1 743 aaKnown RBP12.98□□□□□ -0.33
PTCH2-203ENST00000447098 SLF2Q8IX21 1173 aa12.98□□□□□ -0.33
PTCH2-203ENST00000447098 ANO10Q9NW15 660 aa12.98□□□□□ -0.33
PTCH2-203ENST00000447098 DOK7Q18PE1 504 aa12.98□□□□□ -0.33
PTCH2-203ENST00000447098 ZNF772Q68DY9 489 aaPredicted RBP12.98□□□□□ -0.33
PTCH2-203ENST00000447098 SDR42E1Q8WUS8 393 aa12.98□□□□□ -0.33
PTCH2-203ENST00000447098 ESR2Q92731 530 aa12.98□□□□□ -0.33
PTCH2-203ENST00000447098 DENND2AQ9ULE3 1009 aa12.98□□□□□ -0.33
PTCH2-203ENST00000447098 CEMIPQ8WUJ3 1361 aa12.98□□□□□ -0.33
PTCH2-203ENST00000447098 BAG6P46379 1132 aa12.98□□□□□ -0.33
PTCH2-203ENST00000447098 TMCO3Q6UWJ1 677 aa12.98□□□□□ -0.33
PTCH2-203ENST00000447098 LEO1Q8WVC0 666 aaPredicted RBP12.98□□□□□ -0.33
PTCH2-203ENST00000447098 GTF3C6Q969F1 213 aa12.98□□□□□ -0.33
PTCH2-203ENST00000447098 ZNF287Q9HBT7 754 aa12.98□□□□□ -0.33
PTCH2-203ENST00000447098 TTC14Q96N46 770 aa12.97□□□□□ -0.33
PTCH2-203ENST00000447098 NR1I2O75469 434 aa12.97□□□□□ -0.33
PTCH2-203ENST00000447098 TSPY3P0CV98 308 aa12.97□□□□□ -0.33
PTCH2-203ENST00000447098 TSPY8P0CW00 308 aa12.97□□□□□ -0.33
PTCH2-203ENST00000447098 SFPQP23246 707 aaKnown RBP eCLIP12.97□□□□□ -0.33
PTCH2-203ENST00000447098 GTF2IP78347 998 aa12.97□□□□□ -0.33
PTCH2-203ENST00000447098 SSRP1Q08945 709 aaKnown RBP12.97□□□□□ -0.33
PTCH2-203ENST00000447098 PDIA6Q15084 440 aa12.97□□□□□ -0.33
PTCH2-203ENST00000447098 IFIT1BQ5T764 474 aaKnown RBP12.97□□□□□ -0.33
PTCH2-203ENST00000447098 KAT14Q9H8E8 782 aa12.97□□□□□ -0.33
PTCH2-203ENST00000447098 CCDC196A0A1B0GTZ2 297 aa12.97□□□□□ -0.33
PTCH2-203ENST00000447098 ITPK1Q13572 414 aa12.97□□□□□ -0.33
PTCH2-203ENST00000447098 TBC1D9BQ66K14 1250 aa12.97□□□□□ -0.33
PTCH2-203ENST00000447098 CCAR1Q8IX12 1150 aaKnown RBP12.97□□□□□ -0.33
PTCH2-203ENST00000447098 HAUS7Q99871 368 aa12.97□□□□□ -0.33
PTCH2-203ENST00000447098 HELLSQ9NRZ9 838 aa12.97□□□□□ -0.33
PTCH2-203ENST00000447098 H0YIN7 160 aa12.96□□□□□ -0.33
PTCH2-203ENST00000447098 PDE6AP16499 860 aa12.96□□□□□ -0.33
PTCH2-203ENST00000447098 EIF6P56537 245 aaKnown RBP12.96□□□□□ -0.33
PTCH2-203ENST00000447098 DHX8Q14562 1220 aaKnown RBP12.96□□□□□ -0.33
PTCH2-203ENST00000447098 FAM177A1Q8N128 213 aaPredicted RBP12.96□□□□□ -0.33
PTCH2-203ENST00000447098 ARHGEF1Q92888 912 aaKnown RBP12.96□□□□□ -0.33
PTCH2-203ENST00000447098 CTAGE5O15320 804 aa12.96□□□□□ -0.33
PTCH2-203ENST00000447098 OTUD7BQ6GQQ9 843 aa12.96□□□□□ -0.33
PTCH2-203ENST00000447098 TEX11Q8IYF3 940 aa12.96□□□□□ -0.33
PTCH2-203ENST00000447098 JMYQ8N9B5 988 aa12.96□□□□□ -0.33
PTCH2-203ENST00000447098 FUCA2Q9BTY2 467 aa12.96□□□□□ -0.33
PTCH2-203ENST00000447098 SSBP05455 408 aaKnown RBP eCLIP12.96□□□□□ -0.33
PTCH2-203ENST00000447098 GSDMDP57764 484 aa12.96□□□□□ -0.33
PTCH2-203ENST00000447098 LRRC8AQ8IWT6 810 aa12.96□□□□□ -0.33
PTCH2-203ENST00000447098 OGFOD1Q8N543 542 aa12.96□□□□□ -0.33
PTCH2-203ENST00000447098 CHGBP05060 677 aa12.96□□□□□ -0.34
PTCH2-203ENST00000447098 POLD1P28340 1107 aa12.96□□□□□ -0.34
PTCH2-203ENST00000447098 NLRP5P59047 1200 aa12.96□□□□□ -0.34
PTCH2-203ENST00000447098 TERF2Q15554 542 aa12.96□□□□□ -0.34
PTCH2-203ENST00000447098 TPCN1Q9ULQ1 816 aa12.96□□□□□ -0.34
PTCH2-203ENST00000447098 ERVV-1B6SEH8 477 aa12.95□□□□□ -0.34
PTCH2-203ENST00000447098 ZBTB22O15209 634 aa12.95□□□□□ -0.34
PTCH2-203ENST00000447098 GSTO1P78417 241 aa12.95□□□□□ -0.34
PTCH2-203ENST00000447098 TRMT1LQ7Z2T5 733 aaKnown RBP12.95□□□□□ -0.34
PTCH2-203ENST00000447098 MAPKAPK5Q8IW41 473 aa12.95□□□□□ -0.34
PTCH2-203ENST00000447098 PDILTQ8N807 584 aa12.95□□□□□ -0.34
PTCH2-203ENST00000447098 TDRD7Q8NHU6 1098 aaKnown RBP12.95□□□□□ -0.34
PTCH2-203ENST00000447098 PI4K2BQ8TCG2 481 aa12.95□□□□□ -0.34
PTCH2-203ENST00000447098 CCDC43Q96MW1 224 aaKnown RBP12.95□□□□□ -0.34
PTCH2-203ENST00000447098 HOOK1Q9UJC3 728 aaKnown RBP12.95□□□□□ -0.34
PTCH2-203ENST00000447098 RPS6KA4O75676 772 aa12.95□□□□□ -0.34
PTCH2-203ENST00000447098 TCP10Q12799 353 aa12.95□□□□□ -0.34
PTCH2-203ENST00000447098 TMC6Q7Z403 805 aa12.95□□□□□ -0.34
PTCH2-203ENST00000447098 AOPEPQ8N6M6 819 aa12.95□□□□□ -0.34
PTCH2-203ENST00000447098 ALG1Q9BT22 464 aa12.95□□□□□ -0.34
PTCH2-203ENST00000447098 VPS72Q15906 364 aa12.95□□□□□ -0.34
PTCH2-203ENST00000447098 RTN1Q16799 776 aa12.95□□□□□ -0.34
PTCH2-203ENST00000447098 KRT23Q9C075 422 aa12.95□□□□□ -0.34
PTCH2-203ENST00000447098 ZHX3Q9H4I2 956 aa12.95□□□□□ -0.34
PTCH2-203ENST00000447098 SEC63Q9UGP8 760 aaKnown RBP12.95□□□□□ -0.34
PTCH2-203ENST00000447098 hCG_1642624A0A1W2PR95 340 aa12.94□□□□□ -0.34
PTCH2-203ENST00000447098 MMP10P09238 476 aa12.94□□□□□ -0.34
PTCH2-203ENST00000447098 RPS6KB1P23443 525 aa12.94□□□□□ -0.34
PTCH2-203ENST00000447098 SYT10Q6XYQ8 523 aa12.94□□□□□ -0.34
PTCH2-203ENST00000447098 PCMTD1Q96MG8 357 aaPredicted RBP12.94□□□□□ -0.34
PTCH2-203ENST00000447098 ZSWIM6Q9HCJ5 1215 aa12.94□□□□□ -0.34
PTCH2-203ENST00000447098 KIF20BQ96Q89 1820 aa12.94□□□□□ -0.34
PTCH2-203ENST00000447098 PTPDC1A2A3K4 754 aa12.94□□□□□ -0.34
PTCH2-203ENST00000447098 URI1O94763 535 aaPredicted RBP12.94□□□□□ -0.34
PTCH2-203ENST00000447098 HLA-DOAP06340 250 aa12.94□□□□□ -0.34
PTCH2-203ENST00000447098 MFSD14BQ5SR56 506 aa12.94□□□□□ -0.34
PTCH2-203ENST00000447098 CELF1Q92879 486 aaKnown RBP12.94□□□□□ -0.34
PTCH2-203ENST00000447098 SPATA31A5Q5VU36 1347 aa12.94□□□□□ -0.34
PTCH2-203ENST00000447098 SPATA31A7Q8IWB4 1347 aa12.94□□□□□ -0.34
PTCH2-203ENST00000447098 COL15A1P39059 1388 aa12.94□□□□□ -0.34
PTCH2-203ENST00000447098 HSPD1P10809 573 aaKnown RBP12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms