RNA–Protein interactions for RNA: ENST00000446851.6

LIN54-203, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 4,083 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-203ENST00000446851 PRDM1O75626 825 aa12.32□□□□□ -0.44
LIN54-203ENST00000446851 CELF2O95319 508 aaKnown RBP12.32□□□□□ -0.44
LIN54-203ENST00000446851 TTC22Q5TAA0 569 aa12.32□□□□□ -0.44
LIN54-203ENST00000446851 SH3RF3Q8TEJ3 882 aaPredicted RBP12.32□□□□□ -0.44
LIN54-203ENST00000446851 CSRNP1Q96S65 589 aa12.32□□□□□ -0.44
LIN54-203ENST00000446851 MKNK2Q9HBH9 465 aa12.32□□□□□ -0.44
LIN54-203ENST00000446851 CACNA1SQ13698 1873 aa12.32□□□□□ -0.44
LIN54-203ENST00000446851 NFIAQ12857 509 aa12.32□□□□□ -0.44
LIN54-203ENST00000446851 DEFB129Q9H1M3 183 aa12.32□□□□□ -0.44
LIN54-203ENST00000446851 ANGEL1Q9UNK9 670 aaKnown RBP12.32□□□□□ -0.44
LIN54-203ENST00000446851 SLURP2P0DP57 97 aa12.31□□□□□ -0.44
LIN54-203ENST00000446851 RPS12P25398 132 aaKnown RBP12.31□□□□□ -0.44
LIN54-203ENST00000446851 TNFAIP1Q13829 316 aa12.31□□□□□ -0.44
LIN54-203ENST00000446851 PUS7LQ9H0K6 701 aaKnown RBP12.31□□□□□ -0.44
LIN54-203ENST00000446851 GPAA1O43292 621 aa12.31□□□□□ -0.44
LIN54-203ENST00000446851 HLA-DOAP06340 250 aa12.31□□□□□ -0.44
LIN54-203ENST00000446851 ARID4AP29374 1257 aaPredicted RBP12.31□□□□□ -0.44
LIN54-203ENST00000446851 ZYXQ15942 572 aaKnown RBP12.31□□□□□ -0.44
LIN54-203ENST00000446851 ZNF609O15014 1411 aa12.31□□□□□ -0.44
LIN54-203ENST00000446851 CYP2D7A0A087X1C5 515 aa12.31□□□□□ -0.44
LIN54-203ENST00000446851 LCORLQ8N3X6 602 aa12.31□□□□□ -0.44
LIN54-203ENST00000446851 NSUN4Q96CB9 384 aaKnown RBP12.31□□□□□ -0.44
LIN54-203ENST00000446851 LTBP3Q9NS15 1303 aa12.31□□□□□ -0.44
LIN54-203ENST00000446851 PPP1R12BO60237 982 aaPredicted RBP12.3□□□□□ -0.44
LIN54-203ENST00000446851 RANBP6O60518 1105 aaKnown RBP12.3□□□□□ -0.44
LIN54-203ENST00000446851 MOB2Q70IA6 237 aa12.3□□□□□ -0.44
LIN54-203ENST00000446851 ZNF831Q5JPB2 1677 aa12.3□□□□□ -0.44
LIN54-203ENST00000446851 PLCG2P16885 1265 aa12.3□□□□□ -0.44
LIN54-203ENST00000446851 RAB3GAP1Q15042 981 aa12.3□□□□□ -0.44
LIN54-203ENST00000446851 DPF2Q92785 391 aa12.3□□□□□ -0.44
LIN54-203ENST00000446851 VPS33BQ9H267 617 aa12.3□□□□□ -0.44
LIN54-203ENST00000446851 ZNF70Q9UC06 446 aaPredicted RBP12.3□□□□□ -0.44
LIN54-203ENST00000446851 CDC42EP5Q6NZY7 148 aa12.29□□□□□ -0.44
LIN54-203ENST00000446851 CDC37L1Q7L3B6 337 aa12.29□□□□□ -0.44
LIN54-203ENST00000446851 PI4K2BQ8TCG2 481 aa12.29□□□□□ -0.44
LIN54-203ENST00000446851 SPDYE2BA6NHP3 402 aa12.29□□□□□ -0.44
LIN54-203ENST00000446851 USP17L12C9JPN9 530 aa12.29□□□□□ -0.44
LIN54-203ENST00000446851 USP17L21D6R901 530 aa12.29□□□□□ -0.44
LIN54-203ENST00000446851 SPDYE6P0CI01 402 aa12.29□□□□□ -0.44
LIN54-203ENST00000446851 MKRN1Q9UHC7 482 aaKnown RBP12.29□□□□□ -0.44
LIN54-203ENST00000446851 LRP5O75197 1615 aa12.29□□□□□ -0.44
LIN54-203ENST00000446851 CASZ1Q86V15 1759 aa12.29□□□□□ -0.44
LIN54-203ENST00000446851 A0A0D9SFI3 127 aa12.29□□□□□ -0.44
LIN54-203ENST00000446851 OSBP2Q969R2 916 aa12.29□□□□□ -0.44
LIN54-203ENST00000446851 FEZ1Q99689 392 aa12.29□□□□□ -0.44
LIN54-203ENST00000446851 CDC45O75419 566 aa12.28□□□□□ -0.44
LIN54-203ENST00000446851 IKQ13123 557 aaPredicted RBP12.28□□□□□ -0.44
LIN54-203ENST00000446851 ADGRA1Q86SQ6 560 aa12.28□□□□□ -0.44
LIN54-203ENST00000446851 APPBP2Q92624 585 aa12.28□□□□□ -0.44
LIN54-203ENST00000446851 UBE2Q2LH0YL09 131 aa12.28□□□□□ -0.44
LIN54-203ENST00000446851 KDM4AO75164 1064 aa12.28□□□□□ -0.44
LIN54-203ENST00000446851 GSPT1P15170 499 aaKnown RBP12.28□□□□□ -0.44
LIN54-203ENST00000446851 ZFYP08048 801 aaPredicted RBP12.28□□□□□ -0.44
LIN54-203ENST00000446851 HIRAP54198 1017 aaPredicted RBP12.28□□□□□ -0.44
LIN54-203ENST00000446851 HUNKP57058 714 aa12.28□□□□□ -0.44
LIN54-203ENST00000446851 TRDNQ13061 729 aa12.28□□□□□ -0.44
LIN54-203ENST00000446851 MCMDC2Q4G0Z9 681 aa12.28□□□□□ -0.44
LIN54-203ENST00000446851 NBPF12Q5TAG4 269 aaPredicted RBP12.28□□□□□ -0.44
LIN54-203ENST00000446851 BCORQ6W2J9 1755 aa12.28□□□□□ -0.44
LIN54-203ENST00000446851 COL4A1P02462 1669 aa12.28□□□□□ -0.44
LIN54-203ENST00000446851 MROH7-TTC4A0A0A0MT08 1334 aa12.27□□□□□ -0.44
LIN54-203ENST00000446851 HIP1O00291 1037 aa12.27□□□□□ -0.45
LIN54-203ENST00000446851 CCDC84Q86UT8 332 aaPredicted RBP12.27□□□□□ -0.45
LIN54-203ENST00000446851 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.27□□□□□ -0.45
LIN54-203ENST00000446851 FAM205AQ6ZU69 1335 aa12.27□□□□□ -0.45
LIN54-203ENST00000446851 GDF11O95390 407 aa12.27□□□□□ -0.45
LIN54-203ENST00000446851 ADD2P35612 726 aa12.27□□□□□ -0.45
LIN54-203ENST00000446851 CHADLQ6NUI6 762 aa12.27□□□□□ -0.45
LIN54-203ENST00000446851 CDAN1Q8IWY9 1227 aa12.27□□□□□ -0.45
LIN54-203ENST00000446851 C2orf69Q8N8R5 385 aa12.27□□□□□ -0.45
LIN54-203ENST00000446851 SERPINA10Q9UK55 444 aa12.27□□□□□ -0.45
LIN54-203ENST00000446851 AOX1Q06278 1338 aa12.27□□□□□ -0.45
LIN54-203ENST00000446851 DHX16O60231 1041 aaKnown RBP12.27□□□□□ -0.45
LIN54-203ENST00000446851 CYP2D6P10635 497 aa12.27□□□□□ -0.45
LIN54-203ENST00000446851 RALYLQ86SE5 291 aaKnown RBP12.27□□□□□ -0.45
LIN54-203ENST00000446851 ANKRD31Q8N7Z5 1873 aa12.26□□□□□ -0.45
LIN54-203ENST00000446851 SUPT20HL1Q3ZLR7 823 aa12.26□□□□□ -0.45
LIN54-203ENST00000446851 VPS53Q5VIR6 699 aa12.26□□□□□ -0.45
LIN54-203ENST00000446851 ZFPM1Q8IX07 1006 aa12.26□□□□□ -0.45
LIN54-203ENST00000446851 ZNF444Q8N0Y2 327 aaPredicted RBP12.26□□□□□ -0.45
LIN54-203ENST00000446851 DYNLL2Q96FJ2 89 aa12.26□□□□□ -0.45
LIN54-203ENST00000446851 WRNIP1Q96S55 665 aa12.26□□□□□ -0.45
LIN54-203ENST00000446851 STX8Q9UNK0 236 aa12.26□□□□□ -0.45
LIN54-203ENST00000446851 M0R2C6 588 aa12.26□□□□□ -0.45
LIN54-203ENST00000446851 SLC3A2P08195 630 aaKnown RBP12.26□□□□□ -0.45
LIN54-203ENST00000446851 USP50Q70EL3 339 aaPredicted RBP12.26□□□□□ -0.45
LIN54-203ENST00000446851 CSADQ9Y600 493 aa12.26□□□□□ -0.45
LIN54-203ENST00000446851 TOMM70O94826 608 aa12.26□□□□□ -0.45
LIN54-203ENST00000446851 SMC1BQ8NDV3 1235 aa12.26□□□□□ -0.45
LIN54-203ENST00000446851 ANKRD36CQ5JPF3 1778 aa12.25□□□□□ -0.45
LIN54-203ENST00000446851 CTDSPL2Q05D32 466 aa12.25□□□□□ -0.45
LIN54-203ENST00000446851 APOBEC3HQ6NTF7 200 aaKnown RBP12.25□□□□□ -0.45
LIN54-203ENST00000446851 SLC44A5Q8NCS7 719 aa12.25□□□□□ -0.45
LIN54-203ENST00000446851 ZNF213O14771 459 aa12.25□□□□□ -0.45
LIN54-203ENST00000446851 C15orf52Q6ZUT6 534 aaKnown RBP12.25□□□□□ -0.45
LIN54-203ENST00000446851 TTC6Q86TZ1 520 aa12.25□□□□□ -0.45
LIN54-203ENST00000446851 ZNF589Q86UQ0 364 aaPredicted RBP12.25□□□□□ -0.45
LIN54-203ENST00000446851 LDHDQ86WU2 507 aa12.25□□□□□ -0.45
LIN54-203ENST00000446851 APOBEC3FQ8IUX4 373 aaKnown RBP12.25□□□□□ -0.45
LIN54-203ENST00000446851 CABP5Q9NP86 173 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms