RNA–Protein interactions for RNA: ENST00000446646.1

HDAC9-216, Transcript of histone deacetylase 9, humanhuman

TSL 4

Gene HDAC9, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-216ENST00000446646 PSME4Q14997 1843 aa9.26□□□□□ -0.93
HDAC9-216ENST00000446646 CLRN2A0PK11 232 aa9.26□□□□□ -0.93
HDAC9-216ENST00000446646 HTATSF1O43719 755 aaKnown RBP9.26□□□□□ -0.93
HDAC9-216ENST00000446646 FARP2O94887 1054 aaPredicted RBP9.26□□□□□ -0.93
HDAC9-216ENST00000446646 U2AF1L5P0DN76 240 aaPredicted RBP9.26□□□□□ -0.93
HDAC9-216ENST00000446646 OSBPP22059 807 aa9.26□□□□□ -0.93
HDAC9-216ENST00000446646 LACTBP83111 547 aaPredicted RBP9.26□□□□□ -0.93
HDAC9-216ENST00000446646 U2AF1Q01081 240 aaKnown RBP eCLIP9.26□□□□□ -0.93
HDAC9-216ENST00000446646 TAF1CQ15572 869 aaPredicted RBP9.26□□□□□ -0.93
HDAC9-216ENST00000446646 KRT24Q2M2I5 525 aa9.26□□□□□ -0.93
HDAC9-216ENST00000446646 APOBEC3FQ8IUX4 373 aaKnown RBP9.26□□□□□ -0.93
HDAC9-216ENST00000446646 OPTNQ96CV9 577 aa9.26□□□□□ -0.93
HDAC9-216ENST00000446646 ZMYND8Q9ULU4 1186 aaPredicted RBP9.26□□□□□ -0.93
HDAC9-216ENST00000446646 NCOR1O75376 2440 aa9.25□□□□□ -0.93
HDAC9-216ENST00000446646 LAMB1P07942 1786 aa9.25□□□□□ -0.93
HDAC9-216ENST00000446646 IRS4O14654 1257 aaPredicted RBP9.25□□□□□ -0.93
HDAC9-216ENST00000446646 GJB1P08034 283 aa9.25□□□□□ -0.93
HDAC9-216ENST00000446646 MLLT3P42568 568 aaPredicted RBP9.25□□□□□ -0.93
HDAC9-216ENST00000446646 OTUD7BQ6GQQ9 843 aa9.25□□□□□ -0.93
HDAC9-216ENST00000446646 ANKK1Q8NFD2 765 aa9.25□□□□□ -0.93
HDAC9-216ENST00000446646 DIS3LQ8TF46 1054 aaKnown RBP9.25□□□□□ -0.93
HDAC9-216ENST00000446646 TRIM47Q96LD4 638 aa9.25□□□□□ -0.93
HDAC9-216ENST00000446646 ISCA1Q9BUE6 129 aa9.25□□□□□ -0.93
HDAC9-216ENST00000446646 HTATIP2Q9BUP3 242 aa9.25□□□□□ -0.93
HDAC9-216ENST00000446646 UNC93B1Q9H1C4 597 aa9.25□□□□□ -0.93
HDAC9-216ENST00000446646 CCL15-CCL14A0A0B4J2E2 113 aa9.24□□□□□ -0.93
HDAC9-216ENST00000446646 CCL15Q16663 113 aa9.24□□□□□ -0.93
HDAC9-216ENST00000446646 HSP90AB3PQ58FF7 597 aa9.24□□□□□ -0.93
HDAC9-216ENST00000446646 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.24□□□□□ -0.93
HDAC9-216ENST00000446646 PODNQ7Z5L7 613 aa9.24□□□□□ -0.93
HDAC9-216ENST00000446646 LAPTM4BQ86VI4 370 aa9.24□□□□□ -0.93
HDAC9-216ENST00000446646 OGFOD1Q8N543 542 aa9.24□□□□□ -0.93
HDAC9-216ENST00000446646 CERS5Q8N5B7 392 aa9.24□□□□□ -0.93
HDAC9-216ENST00000446646 U2AF1L4Q8WU68 220 aaKnown RBP9.24□□□□□ -0.93
HDAC9-216ENST00000446646 FAM161BQ96MY7 647 aa9.24□□□□□ -0.93
HDAC9-216ENST00000446646 RNF208Q9H0X6 261 aa9.24□□□□□ -0.93
HDAC9-216ENST00000446646 ZFYVE28Q9HCC9 887 aa9.24□□□□□ -0.93
HDAC9-216ENST00000446646 PLA2G2EQ9NZK7 142 aa9.24□□□□□ -0.93
HDAC9-216ENST00000446646 ALPK3Q96L96 1907 aa9.24□□□□□ -0.93
HDAC9-216ENST00000446646 XIRP2A4UGR9 3374 aa9.24□□□□□ -0.93
HDAC9-216ENST00000446646 PPP1R12BO60237 982 aaPredicted RBP9.23□□□□□ -0.93
HDAC9-216ENST00000446646 SYN1P17600 705 aa9.23□□□□□ -0.93
HDAC9-216ENST00000446646 PACS2Q86VP3 889 aa9.23□□□□□ -0.93
HDAC9-216ENST00000446646 CDHR5Q9HBB8 845 aa9.23□□□□□ -0.93
HDAC9-216ENST00000446646 RIPOR2Q9Y4F9 1068 aa9.23□□□□□ -0.93
HDAC9-216ENST00000446646 RPTORQ8N122 1335 aa9.23□□□□□ -0.93
HDAC9-216ENST00000446646 OTOFQ9HC10 1997 aa9.23□□□□□ -0.93
HDAC9-216ENST00000446646 BTBD19C9JJ37 291 aa9.22□□□□□ -0.93
HDAC9-216ENST00000446646 TLR2O60603 784 aa9.22□□□□□ -0.93
HDAC9-216ENST00000446646 GRK4P32298 578 aa9.22□□□□□ -0.93
HDAC9-216ENST00000446646 MAGEA10P43363 369 aaPredicted RBP9.22□□□□□ -0.93
HDAC9-216ENST00000446646 VGLL4Q14135 290 aa9.22□□□□□ -0.93
HDAC9-216ENST00000446646 LRIT3Q3SXY7 679 aa9.22□□□□□ -0.93
HDAC9-216ENST00000446646 STRIP1Q5VSL9 837 aa9.22□□□□□ -0.93
HDAC9-216ENST00000446646 C7orf61Q8IZ16 206 aa9.22□□□□□ -0.93
HDAC9-216ENST00000446646 PNISRQ8TF01 805 aaKnown RBP9.22□□□□□ -0.93
HDAC9-216ENST00000446646 CDCA7LQ96GN5 454 aa9.22□□□□□ -0.93
HDAC9-216ENST00000446646 ZFRQ96KR1 1074 aaKnown RBP9.22□□□□□ -0.93
HDAC9-216ENST00000446646 SRRDQ9UH36 339 aa9.22□□□□□ -0.93
HDAC9-216ENST00000446646 CPA4Q9UI42 421 aa9.22□□□□□ -0.93
HDAC9-216ENST00000446646 XDHP47989 1333 aa9.22□□□□□ -0.93
HDAC9-216ENST00000446646 ATP2B4P23634 1241 aa9.21□□□□□ -0.94
HDAC9-216ENST00000446646 BMP8BP34820 402 aa9.21□□□□□ -0.94
HDAC9-216ENST00000446646 PSMC4P43686 418 aa9.21□□□□□ -0.94
HDAC9-216ENST00000446646 PRSS12P56730 875 aa9.21□□□□□ -0.94
HDAC9-216ENST00000446646 PRKCZQ05513 592 aa9.21□□□□□ -0.94
HDAC9-216ENST00000446646 RASA3Q14644 834 aa9.21□□□□□ -0.94
HDAC9-216ENST00000446646 ANKRD13AQ8IZ07 590 aa9.21□□□□□ -0.94
HDAC9-216ENST00000446646 PAWRQ96IZ0 340 aaKnown RBP9.21□□□□□ -0.94
HDAC9-216ENST00000446646 PRMT6Q96LA8 375 aaPredicted RBP9.21□□□□□ -0.94
HDAC9-216ENST00000446646 VEZTQ9HBM0 779 aa9.21□□□□□ -0.94
HDAC9-216ENST00000446646 CHPF2Q9P2E5 772 aa9.21□□□□□ -0.94
HDAC9-216ENST00000446646 TSPYL4Q9UJ04 414 aa9.21□□□□□ -0.94
HDAC9-216ENST00000446646 GABRQQ9UN88 632 aa9.21□□□□□ -0.94
HDAC9-216ENST00000446646 GTF3C3Q9Y5Q9 886 aa9.21□□□□□ -0.94
HDAC9-216ENST00000446646 F8W031 263 aaPredicted RBP9.2□□□□□ -0.94
HDAC9-216ENST00000446646 SNAP23O00161 211 aa9.2□□□□□ -0.94
HDAC9-216ENST00000446646 SGPL1O95470 568 aa9.2□□□□□ -0.94
HDAC9-216ENST00000446646 IREB2P48200 963 aaKnown RBP9.2□□□□□ -0.94
HDAC9-216ENST00000446646 GTF2IP78347 998 aa9.2□□□□□ -0.94
HDAC9-216ENST00000446646 ARHGEF6Q15052 776 aa9.2□□□□□ -0.94
HDAC9-216ENST00000446646 TTLL5Q6EMB2 1281 aa9.2□□□□□ -0.94
HDAC9-216ENST00000446646 C17orf99Q6UX52 265 aa9.2□□□□□ -0.94
HDAC9-216ENST00000446646 NKX2-3Q8TAU0 364 aa9.2□□□□□ -0.94
HDAC9-216ENST00000446646 RAET1EQ8TD07 263 aa9.2□□□□□ -0.94
HDAC9-216ENST00000446646 JAG2Q9Y219 1238 aa9.2□□□□□ -0.94
HDAC9-216ENST00000446646 ZNF804BA4D1E1 1349 aa9.2□□□□□ -0.94
HDAC9-216ENST00000446646 IRS2Q9Y4H2 1338 aa9.2□□□□□ -0.94
HDAC9-216ENST00000446646 MED23Q9ULK4 1368 aa9.2□□□□□ -0.94
HDAC9-216ENST00000446646 COL1A1P02452 1464 aaPredicted RBP9.2□□□□□ -0.94
HDAC9-216ENST00000446646 ELNP15502 786 aa9.19□□□□□ -0.94
HDAC9-216ENST00000446646 DLGAP5Q15398 846 aa9.19□□□□□ -0.94
HDAC9-216ENST00000446646 CFAP100Q494V2 611 aa9.19□□□□□ -0.94
HDAC9-216ENST00000446646 TDHQ8IZJ6 230 aa9.19□□□□□ -0.94
HDAC9-216ENST00000446646 PLBD2Q8NHP8 589 aa9.19□□□□□ -0.94
HDAC9-216ENST00000446646 TEPSINQ96N21 525 aa9.19□□□□□ -0.94
HDAC9-216ENST00000446646 DEFB118Q96PH6 123 aa9.19□□□□□ -0.94
HDAC9-216ENST00000446646 BIN2Q9UBW5 565 aaPredicted RBP9.19□□□□□ -0.94
HDAC9-216ENST00000446646 MINPP1Q9UNW1 487 aa9.19□□□□□ -0.94
HDAC9-216ENST00000446646 MYPNQ86TC9 1320 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms