RNA–Protein interactions for RNA: ENST00000445497.1

UBBP3-201, Transcript of ubiquitin B pseudogene 3, humanhuman

BASIC

Gene UBBP3, Length 241 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP3-201ENST00000445497 TMC1Q8TDI8 760 aa3.24□□□□□ -1.89
UBBP3-201ENST00000445497 GTF3C2Q8WUA4 911 aaPredicted RBP3.24□□□□□ -1.89
UBBP3-201ENST00000445497 SPIRE2Q8WWL2 714 aa3.24□□□□□ -1.89
UBBP3-201ENST00000445497 RTF1Q92541 710 aaKnown RBP3.24□□□□□ -1.89
UBBP3-201ENST00000445497 CEP95Q96GE4 821 aa3.24□□□□□ -1.89
UBBP3-201ENST00000445497 PPM1MQ96MI6 270 aa3.24□□□□□ -1.89
UBBP3-201ENST00000445497 ZNF396Q96N95 335 aaPredicted RBP3.24□□□□□ -1.89
UBBP3-201ENST00000445497 GBP4Q96PP9 640 aa3.24□□□□□ -1.89
UBBP3-201ENST00000445497 SARGQ9BW04 601 aa3.24□□□□□ -1.89
UBBP3-201ENST00000445497 LSM14BQ9BX40 385 aaKnown RBP3.24□□□□□ -1.89
UBBP3-201ENST00000445497 GTPBP4Q9BZE4 634 aaKnown RBP3.24□□□□□ -1.89
UBBP3-201ENST00000445497 CDH19Q9H159 772 aa3.24□□□□□ -1.89
UBBP3-201ENST00000445497 RWDD1Q9H446 243 aaPredicted RBP3.24□□□□□ -1.89
UBBP3-201ENST00000445497 ZBTB3Q9H5J0 574 aa3.24□□□□□ -1.89
UBBP3-201ENST00000445497 RPAP3Q9H6T3 665 aaPredicted RBP3.24□□□□□ -1.89
UBBP3-201ENST00000445497 EPB41L4AQ9HCS5 686 aaPredicted RBP3.24□□□□□ -1.89
UBBP3-201ENST00000445497 SRA1Q9HD15 236 aaKnown RBP3.24□□□□□ -1.89
UBBP3-201ENST00000445497 PLCB1Q9NQ66 1216 aa3.24□□□□□ -1.89
UBBP3-201ENST00000445497 ANO2Q9NQ90 1003 aa3.24□□□□□ -1.89
UBBP3-201ENST00000445497 EXOC1Q9NV70 894 aa3.24□□□□□ -1.89
UBBP3-201ENST00000445497 RABL2AQ9UBK7 228 aaPredicted RBP3.24□□□□□ -1.89
UBBP3-201ENST00000445497 STAP2Q9UGK3 403 aa3.24□□□□□ -1.89
UBBP3-201ENST00000445497 FBXO10Q9UK96 956 aa3.24□□□□□ -1.89
UBBP3-201ENST00000445497 GTF3C4Q9UKN8 822 aa3.24□□□□□ -1.89
UBBP3-201ENST00000445497 TRAF3IP3Q9Y228 551 aa3.24□□□□□ -1.89
UBBP3-201ENST00000445497 MRPL11Q9Y3B7 192 aaKnown RBP3.24□□□□□ -1.89
UBBP3-201ENST00000445497 PCDHGB7Q9Y5F8 929 aa3.24□□□□□ -1.89
UBBP3-201ENST00000445497 hCG_1984214I3L0E3 225 aa3.23□□□□□ -1.89
UBBP3-201ENST00000445497 INO80B-WBP1J3KQ70 363 aa3.23□□□□□ -1.89
UBBP3-201ENST00000445497 J3KRW8 73 aa3.23□□□□□ -1.89
UBBP3-201ENST00000445497 ZBTB39O15060 712 aa3.23□□□□□ -1.89
UBBP3-201ENST00000445497 DDX3YO15523 660 aaKnown RBP3.23□□□□□ -1.89
UBBP3-201ENST00000445497 NEMFO60524 1076 aa3.23□□□□□ -1.89
UBBP3-201ENST00000445497 PLOD3O60568 738 aa3.23□□□□□ -1.89
UBBP3-201ENST00000445497 CLASP2O75122 1294 aaKnown RBP3.23□□□□□ -1.89
UBBP3-201ENST00000445497 MTRF1O75570 445 aaKnown RBP3.23□□□□□ -1.89
UBBP3-201ENST00000445497 RFPL1O75677 317 aa3.23□□□□□ -1.89
UBBP3-201ENST00000445497 LETM1O95202 739 aaPredicted RBP3.23□□□□□ -1.89
UBBP3-201ENST00000445497 KRT13P13646 458 aa3.23□□□□□ -1.89
UBBP3-201ENST00000445497 HSD3B1P14060 373 aa3.23□□□□□ -1.89
UBBP3-201ENST00000445497 KCNA6P17658 529 aa3.23□□□□□ -1.89
UBBP3-201ENST00000445497 XBP1P17861 261 aa3.23□□□□□ -1.89
UBBP3-201ENST00000445497 MX2P20592 715 aa3.23□□□□□ -1.89
UBBP3-201ENST00000445497 HSPA4P34932 840 aa3.23□□□□□ -1.89
UBBP3-201ENST00000445497 STAT3P40763 770 aa3.23□□□□□ -1.89
UBBP3-201ENST00000445497 PLA2G4AP47712 749 aa3.23□□□□□ -1.89
UBBP3-201ENST00000445497 FXR2P51116 673 aaKnown RBP eCLIP3.23□□□□□ -1.89
UBBP3-201ENST00000445497 RAB27AP51159 221 aa3.23□□□□□ -1.89
UBBP3-201ENST00000445497 RENBPP51606 427 aa3.23□□□□□ -1.89
UBBP3-201ENST00000445497 CLNS1AP54105 237 aaKnown RBP3.23□□□□□ -1.89
UBBP3-201ENST00000445497 CSE1LP55060 971 aaKnown RBP3.23□□□□□ -1.89
UBBP3-201ENST00000445497 UBASH3AP57075 661 aa3.23□□□□□ -1.89
UBBP3-201ENST00000445497 BPIFB3P59826 476 aa3.23□□□□□ -1.89
UBBP3-201ENST00000445497 MAP3K9P80192 1104 aa3.23□□□□□ -1.89
UBBP3-201ENST00000445497 NFKB2Q00653 900 aa3.23□□□□□ -1.89
UBBP3-201ENST00000445497 TRDNQ13061 729 aa3.23□□□□□ -1.89
UBBP3-201ENST00000445497 PAK2Q13177 524 aa3.23□□□□□ -1.89
UBBP3-201ENST00000445497 TNIP1Q15025 636 aa3.23□□□□□ -1.89
UBBP3-201ENST00000445497 LRRC41Q15345 812 aa3.23□□□□□ -1.89
UBBP3-201ENST00000445497 ELF2Q15723 593 aa3.23□□□□□ -1.89
UBBP3-201ENST00000445497 QPCTQ16769 361 aa3.23□□□□□ -1.89
UBBP3-201ENST00000445497 COBLL1Q53SF7 1204 aa3.23□□□□□ -1.89
UBBP3-201ENST00000445497 PRR16Q569H4 304 aa3.23□□□□□ -1.89
UBBP3-201ENST00000445497 TNNI3KQ59H18 835 aa3.23□□□□□ -1.89
UBBP3-201ENST00000445497 SLC10A5Q5PT55 438 aa3.23□□□□□ -1.89
UBBP3-201ENST00000445497 CCDC122Q5T0U0 273 aa3.23□□□□□ -1.89
UBBP3-201ENST00000445497 ARMC4Q5T2S8 1044 aa3.23□□□□□ -1.89
UBBP3-201ENST00000445497 SWT1Q5T5J6 900 aaKnown RBP3.23□□□□□ -1.89
UBBP3-201ENST00000445497 MFSD4BQ5TF39 518 aa3.23□□□□□ -1.89
UBBP3-201ENST00000445497 SPATA1Q5VX52 437 aa3.23□□□□□ -1.89
UBBP3-201ENST00000445497 FAAH2Q6GMR7 532 aa3.23□□□□□ -1.89
UBBP3-201ENST00000445497 CXorf57Q6NSI4 855 aaKnown RBP3.23□□□□□ -1.89
UBBP3-201ENST00000445497 C4orf50Q6ZRC1 276 aa3.23□□□□□ -1.89
UBBP3-201ENST00000445497 NECAB2Q7Z6G3 386 aa3.23□□□□□ -1.89
UBBP3-201ENST00000445497 PNMA8AQ86V59 439 aaPredicted RBP3.23□□□□□ -1.89
UBBP3-201ENST00000445497 DDX42Q86XP3 938 aaKnown RBP eCLIP3.23□□□□□ -1.89
UBBP3-201ENST00000445497 JAMLQ86YT9 394 aa3.23□□□□□ -1.89
UBBP3-201ENST00000445497 ZNF713Q8N859 430 aaPredicted RBP3.23□□□□□ -1.89
UBBP3-201ENST00000445497 MSANTD4Q8NCY6 345 aa3.23□□□□□ -1.89
UBBP3-201ENST00000445497 IL17REQ8NFR9 667 aa3.23□□□□□ -1.89
UBBP3-201ENST00000445497 OR8H1Q8NGG4 311 aa3.23□□□□□ -1.89
UBBP3-201ENST00000445497 TDRD7Q8NHU6 1098 aaKnown RBP3.23□□□□□ -1.89
UBBP3-201ENST00000445497 FBF1Q8TES7 1133 aa3.23□□□□□ -1.89
UBBP3-201ENST00000445497 THAP3Q8WTV1 239 aaPredicted RBP3.23□□□□□ -1.89
UBBP3-201ENST00000445497 USP6NLQ92738 828 aa3.23□□□□□ -1.89
UBBP3-201ENST00000445497 GJA10Q969M2 543 aa3.23□□□□□ -1.89
UBBP3-201ENST00000445497 TTC17Q96AE7 1141 aa3.23□□□□□ -1.89
UBBP3-201ENST00000445497 CHMP4CQ96CF2 233 aa3.23□□□□□ -1.89
UBBP3-201ENST00000445497 MFSD3Q96ES6 412 aa3.23□□□□□ -1.89
UBBP3-201ENST00000445497 CFAP36Q96G28 342 aa3.23□□□□□ -1.89
UBBP3-201ENST00000445497 HIC2Q96JB3 615 aa3.23□□□□□ -1.89
UBBP3-201ENST00000445497 NLRP3Q96P20 1036 aa3.23□□□□□ -1.89
UBBP3-201ENST00000445497 MOGAT1Q96PD6 335 aa3.23□□□□□ -1.89
UBBP3-201ENST00000445497 PHOX2BQ99453 314 aa3.23□□□□□ -1.89
UBBP3-201ENST00000445497 NUDT16L1Q9BRJ7 211 aaKnown RBP3.23□□□□□ -1.89
UBBP3-201ENST00000445497 VPS33BQ9H267 617 aa3.23□□□□□ -1.89
UBBP3-201ENST00000445497 ZNF408Q9H9D4 720 aa3.23□□□□□ -1.89
UBBP3-201ENST00000445497 NEUROD4Q9HD90 331 aa3.23□□□□□ -1.89
UBBP3-201ENST00000445497 DDX21Q9NR30 783 aaKnown RBP eCLIP3.23□□□□□ -1.89
UBBP3-201ENST00000445497 SMC4Q9NTJ3 1288 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 128.4 ms