RNA–Protein interactions for RNA: ENST00000445268.5

RPE-213, Transcript of ribulose-5-phosphate-3-epimerase, human

TSL 5 BASIC

Gene RPE, Length 668 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPE-213	ENST00000445268	RIPK4	P57078	832 aa		11.82	□□□□□ -0.52
RPE-213	ENST00000445268	FKBP1A	P62942	108 aa	Known RBP	11.82	□□□□□ -0.52
RPE-213	ENST00000445268	PPAT	Q06203	517 aa		11.82	□□□□□ -0.52
RPE-213	ENST00000445268	IRF5	Q13568	498 aa		11.82	□□□□□ -0.52
RPE-213	ENST00000445268	ANKRD2	Q9GZV1	360 aa		11.82	□□□□□ -0.52
RPE-213	ENST00000445268	TTYH1	Q9H313	450 aa	Predicted RBP	11.82	□□□□□ -0.52
RPE-213	ENST00000445268	TTF2	Q9UNY4	1162 aa	Known RBP	11.82	□□□□□ -0.52
RPE-213	ENST00000445268	KCNH4	Q9UQ05	1017 aa		11.82	□□□□□ -0.52
RPE-213	ENST00000445268	LAS1L	Q9Y4W2	734 aa	Known RBP	11.82	□□□□□ -0.52
RPE-213	ENST00000445268	IL1R1	P14778	569 aa		11.81	□□□□□ -0.52
RPE-213	ENST00000445268	CAPN2	P17655	700 aa		11.81	□□□□□ -0.52
RPE-213	ENST00000445268	LRRC26	Q2I0M4	334 aa		11.81	□□□□□ -0.52
RPE-213	ENST00000445268	GPAT2	Q6NUI2	795 aa		11.81	□□□□□ -0.52
RPE-213	ENST00000445268	PIEZO1	Q92508	2521 aa		11.8	□□□□□ -0.52
RPE-213	ENST00000445268	ITGA6	P23229	1130 aa		11.8	□□□□□ -0.52
RPE-213	ENST00000445268	CRK	P46108	304 aa		11.8	□□□□□ -0.52
RPE-213	ENST00000445268	GRIK5	Q16478	980 aa		11.8	□□□□□ -0.52
RPE-213	ENST00000445268	MFSD14B	Q5SR56	506 aa		11.8	□□□□□ -0.52
RPE-213	ENST00000445268	MIGA2	Q7L4E1	593 aa		11.8	□□□□□ -0.52
RPE-213	ENST00000445268	ZNF804A	Q7Z570	1209 aa		11.8	□□□□□ -0.52
RPE-213	ENST00000445268	TCF20	Q9UGU0	1960 aa	Known RBP	11.79	□□□□□ -0.52
RPE-213	ENST00000445268	PHIP	Q8WWQ0	1821 aa		11.79	□□□□□ -0.52
RPE-213	ENST00000445268	CHL1	O00533	1208 aa		11.79	□□□□□ -0.52
RPE-213	ENST00000445268	HMGCR	P04035	888 aa		11.79	□□□□□ -0.52
RPE-213	ENST00000445268	HOXB7	P09629	217 aa		11.79	□□□□□ -0.52
RPE-213	ENST00000445268	DUSP27	Q5VZP5	1158 aa		11.79	□□□□□ -0.52
RPE-213	ENST00000445268	MPHOSPH8	Q99549	860 aa		11.79	□□□□□ -0.52
RPE-213	ENST00000445268	METTL22	Q9BUU2	404 aa	Predicted RBP	11.79	□□□□□ -0.52
RPE-213	ENST00000445268	SERPINA10	Q9UK55	444 aa		11.79	□□□□□ -0.52
RPE-213	ENST00000445268	MYO9B	Q13459	2157 aa		11.79	□□□□□ -0.52
RPE-213	ENST00000445268	BDP1	A6H8Y1	2624 aa		11.79	□□□□□ -0.52
RPE-213	ENST00000445268	DOCK2	Q92608	1830 aa		11.79	□□□□□ -0.52
RPE-213	ENST00000445268	IGKV5-2	P06315	115 aa		11.78	□□□□□ -0.52
RPE-213	ENST00000445268	C15orf52	Q6ZUT6	534 aa	Known RBP	11.78	□□□□□ -0.52
RPE-213	ENST00000445268	ZNF341	Q9BYN7	854 aa		11.78	□□□□□ -0.52
RPE-213	ENST00000445268	OGDHL	Q9ULD0	1010 aa		11.78	□□□□□ -0.52
RPE-213	ENST00000445268	COL6A1	P12109	1028 aa		11.77	□□□□□ -0.53
RPE-213	ENST00000445268	C9orf50	Q5SZB4	431 aa		11.77	□□□□□ -0.53
RPE-213	ENST00000445268	UBE3B	Q7Z3V4	1068 aa		11.77	□□□□□ -0.53
RPE-213	ENST00000445268	HMX1	Q9NP08	348 aa	Predicted RBP	11.77	□□□□□ -0.53
RPE-213	ENST00000445268	MAP3K2	Q9Y2U5	619 aa		11.77	□□□□□ -0.53
RPE-213	ENST00000445268	RPAP1	Q9BWH6	1393 aa	Predicted RBP	11.77	□□□□□ -0.53
RPE-213	ENST00000445268	DOCK1	Q14185	1865 aa		11.76	□□□□□ -0.53
RPE-213	ENST00000445268	MUC6	Q6W4X9	2439 aa		11.76	□□□□□ -0.53
RPE-213	ENST00000445268	TMPO	P42166	694 aa	Known RBP	11.76	□□□□□ -0.53
RPE-213	ENST00000445268	SHH	Q15465	462 aa		11.76	□□□□□ -0.53
RPE-213	ENST00000445268	CWF19L2	Q2TBE0	894 aa	Known RBP	11.76	□□□□□ -0.53
RPE-213	ENST00000445268	DCAF15	Q66K64	600 aa		11.76	□□□□□ -0.53
RPE-213	ENST00000445268	GADL1	Q6ZQY3	521 aa		11.76	□□□□□ -0.53
RPE-213	ENST00000445268	ANKRD13C	Q8N6S4	541 aa		11.76	□□□□□ -0.53
RPE-213	ENST00000445268	ADAMTS19	Q8TE59	1207 aa		11.76	□□□□□ -0.53
RPE-213	ENST00000445268	COA7	Q96BR5	231 aa		11.76	□□□□□ -0.53
RPE-213	ENST00000445268	LBHD1	Q9BQE6	289 aa	Predicted RBP	11.76	□□□□□ -0.53
RPE-213	ENST00000445268	SYNGAP1	Q96PV0	1343 aa		11.76	□□□□□ -0.53
RPE-213	ENST00000445268	LMOD3	Q0VAK6	560 aa		11.75	□□□□□ -0.53
RPE-213	ENST00000445268	NEUROD2	Q15784	382 aa		11.75	□□□□□ -0.53
RPE-213	ENST00000445268	SMCR8	Q8TEV9	937 aa	Predicted RBP	11.75	□□□□□ -0.53
RPE-213	ENST00000445268	TRIB2	Q92519	343 aa		11.75	□□□□□ -0.53
RPE-213	ENST00000445268	LOC285556	D6RIA3	1793 aa		11.74	□□□□□ -0.53
RPE-213	ENST00000445268	MYH13	Q9UKX3	1938 aa		11.74	□□□□□ -0.53
RPE-213	ENST00000445268		A0A0G2JLL6	359 aa	Predicted RBP	11.73	□□□□□ -0.53
RPE-213	ENST00000445268	PRKAR2A	P13861	404 aa	Known RBP	11.73	□□□□□ -0.53
RPE-213	ENST00000445268	GYG1	P46976	350 aa		11.73	□□□□□ -0.53
RPE-213	ENST00000445268	RLF	Q13129	1914 aa		11.73	□□□□□ -0.53
RPE-213	ENST00000445268	NOL9	Q5SY16	702 aa	Known RBP	11.73	□□□□□ -0.53
RPE-213	ENST00000445268	PRRT2	Q7Z6L0	340 aa	Predicted RBP	11.73	□□□□□ -0.53
RPE-213	ENST00000445268	FAM83A	Q86UY5	434 aa		11.73	□□□□□ -0.53
RPE-213	ENST00000445268	SNX27	Q96L92	541 aa		11.73	□□□□□ -0.53
RPE-213	ENST00000445268	NECAB3	Q96P71	396 aa	Predicted RBP	11.73	□□□□□ -0.53
RPE-213	ENST00000445268	UHRF1	Q96T88	793 aa	Predicted RBP	11.73	□□□□□ -0.53
RPE-213	ENST00000445268	TMOD2	Q9NZR1	351 aa		11.73	□□□□□ -0.53
RPE-213	ENST00000445268	NEURL1B	A8MQ27	555 aa		11.72	□□□□□ -0.53
RPE-213	ENST00000445268	ELL2	O00472	640 aa	Predicted RBP	11.72	□□□□□ -0.53
RPE-213	ENST00000445268	PLIN1	O60240	522 aa		11.72	□□□□□ -0.53
RPE-213	ENST00000445268	TDRD7	Q8NHU6	1098 aa	Known RBP	11.72	□□□□□ -0.53
RPE-213	ENST00000445268	PPM1E	Q8WY54	764 aa		11.72	□□□□□ -0.53
RPE-213	ENST00000445268	HOOK2	Q96ED9	719 aa		11.72	□□□□□ -0.53
RPE-213	ENST00000445268	PNN	Q9H307	717 aa	Known RBP	11.72	□□□□□ -0.53
RPE-213	ENST00000445268	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	11.72	□□□□□ -0.53
RPE-213	ENST00000445268	ZNF112	Q9UJU3	913 aa		11.72	□□□□□ -0.53
RPE-213	ENST00000445268	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	11.72	□□□□□ -0.53
RPE-213	ENST00000445268		H7C1W4	665 aa		11.71	□□□□□ -0.53
RPE-213	ENST00000445268	CXCL11	O14625	94 aa		11.71	□□□□□ -0.53
RPE-213	ENST00000445268	ATN1	P54259	1190 aa	Predicted RBP	11.71	□□□□□ -0.53
RPE-213	ENST00000445268	SMAD3	P84022	425 aa	Known RBP	11.71	□□□□□ -0.53
RPE-213	ENST00000445268	CHAF1A	Q13111	956 aa	Predicted RBP	11.71	□□□□□ -0.53
RPE-213	ENST00000445268	GRIN2C	Q14957	1233 aa		11.71	□□□□□ -0.53
RPE-213	ENST00000445268	FAM110C	Q1W6H9	321 aa		11.71	□□□□□ -0.53
RPE-213	ENST00000445268	MAP3K21	Q5TCX8	1036 aa		11.71	□□□□□ -0.53
RPE-213	ENST00000445268	CCDC84	Q86UT8	332 aa	Predicted RBP	11.71	□□□□□ -0.53
RPE-213	ENST00000445268	CCDC146	Q8IYE0	955 aa		11.71	□□□□□ -0.53
RPE-213	ENST00000445268	TEKT1	Q969V4	418 aa		11.71	□□□□□ -0.53
RPE-213	ENST00000445268	MBIP	Q9NS73	344 aa		11.71	□□□□□ -0.53
RPE-213	ENST00000445268	GJD2	Q9UKL4	321 aa		11.71	□□□□□ -0.53
RPE-213	ENST00000445268	TRIM35	Q9UPQ4	493 aa		11.71	□□□□□ -0.53
RPE-213	ENST00000445268	ATAD5	Q96QE3	1844 aa		11.7	□□□□□ -0.54
RPE-213	ENST00000445268	ANKRD18B	A2A2Z9	1011 aa		11.7	□□□□□ -0.54
RPE-213	ENST00000445268	PI4KAP2	A4QPH2	592 aa		11.7	□□□□□ -0.54
RPE-213	ENST00000445268	DDX58	O95786	925 aa	Known RBP	11.7	□□□□□ -0.54
RPE-213	ENST00000445268	CSF1R	P07333	972 aa		11.7	□□□□□ -0.54

Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms