RNA–Protein interactions for RNA: ENST00000445220.5

SHANK3-203, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK3, Length 5,175 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-203ENST00000445220 RABEP2Q9H5N1 569 aa20.93■□□□□ 0.94
SHANK3-203ENST00000445220 RAD50Q92878 1312 aa20.93■□□□□ 0.94
SHANK3-203ENST00000445220 TSPY2A6NKD2 308 aa20.93■□□□□ 0.94
SHANK3-203ENST00000445220 PAXIP1Q6ZW49 1069 aaPredicted RBP20.93■□□□□ 0.94
SHANK3-203ENST00000445220 CCDC25Q86WR0 208 aa20.93■□□□□ 0.94
SHANK3-203ENST00000445220 CRNKL1Q9BZJ0 848 aaKnown RBP20.93■□□□□ 0.94
SHANK3-203ENST00000445220 GCKP35557 465 aa20.92■□□□□ 0.94
SHANK3-203ENST00000445220 GSTO1P78417 241 aa20.92■□□□□ 0.94
SHANK3-203ENST00000445220 GSTA5Q7RTV2 222 aa20.92■□□□□ 0.94
SHANK3-203ENST00000445220 CROCCP2Q86T23 111 aa20.92■□□□□ 0.94
SHANK3-203ENST00000445220 DHX32Q7L7V1 743 aaKnown RBP20.92■□□□□ 0.94
SHANK3-203ENST00000445220 JAKMIP2Q96AA8 810 aa20.92■□□□□ 0.94
SHANK3-203ENST00000445220 CCDC174Q6PII3 467 aa20.91■□□□□ 0.94
SHANK3-203ENST00000445220 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.91■□□□□ 0.94
SHANK3-203ENST00000445220 YTHDC2Q9H6S0 1430 aaKnown RBP20.91■□□□□ 0.94
SHANK3-203ENST00000445220 MTUS1Q9ULD2 1270 aa20.91■□□□□ 0.94
SHANK3-203ENST00000445220 LMBR1LQ6UX01 489 aa20.91■□□□□ 0.94
SHANK3-203ENST00000445220 IQUBQ8NA54 791 aa20.91■□□□□ 0.94
SHANK3-203ENST00000445220 BABAM1Q9NWV8 329 aa20.91■□□□□ 0.94
SHANK3-203ENST00000445220 PPFIA4O75335 1185 aa20.91■□□□□ 0.94
SHANK3-203ENST00000445220 APOBRQ0VD83 1088 aa20.91■□□□□ 0.94
SHANK3-203ENST00000445220 VCX3BQ9H321 246 aa20.91■□□□□ 0.94
SHANK3-203ENST00000445220 CAPN7Q9Y6W3 813 aa20.91■□□□□ 0.94
SHANK3-203ENST00000445220 SPATS2Q86XZ4 545 aaKnown RBP20.91■□□□□ 0.94
SHANK3-203ENST00000445220 ERMNQ8TAM6 284 aa20.91■□□□□ 0.94
SHANK3-203ENST00000445220 CCDC97Q96F63 343 aaPredicted RBP20.91■□□□□ 0.94
SHANK3-203ENST00000445220 ZNF215Q9UL58 517 aaPredicted RBP20.91■□□□□ 0.94
SHANK3-203ENST00000445220 GADD45BO75293 160 aaPredicted RBP20.9■□□□□ 0.94
SHANK3-203ENST00000445220 TMTC1Q8IUR5 882 aa20.9■□□□□ 0.94
SHANK3-203ENST00000445220 BAIAP2L1Q9UHR4 511 aa20.9■□□□□ 0.94
SHANK3-203ENST00000445220 ERCC6LQ2NKX8 1250 aa20.9■□□□□ 0.94
SHANK3-203ENST00000445220 APBB1IPQ7Z5R6 666 aaPredicted RBP20.9■□□□□ 0.94
SHANK3-203ENST00000445220 C6orf229H3BNL8 230 aa20.9■□□□□ 0.94
SHANK3-203ENST00000445220 CEP85LQ5SZL2 805 aa20.9■□□□□ 0.94
SHANK3-203ENST00000445220 CCDC63Q8NA47 563 aa20.9■□□□□ 0.94
SHANK3-203ENST00000445220 ARID4AP29374 1257 aaPredicted RBP20.9■□□□□ 0.94
SHANK3-203ENST00000445220 PPP1R7Q15435 360 aa20.9■□□□□ 0.94
SHANK3-203ENST00000445220 MICAL1Q8TDZ2 1067 aa20.9■□□□□ 0.94
SHANK3-203ENST00000445220 INSRP06213 1382 aa20.89■□□□□ 0.94
SHANK3-203ENST00000445220 DDX23Q9BUQ8 820 aaKnown RBP20.89■□□□□ 0.94
SHANK3-203ENST00000445220 ATP10AO60312 1499 aa20.89■□□□□ 0.94
SHANK3-203ENST00000445220 PAK2Q13177 524 aa20.89■□□□□ 0.93
SHANK3-203ENST00000445220 ESR2Q92731 530 aa20.89■□□□□ 0.93
SHANK3-203ENST00000445220 CCT6AP40227 531 aaKnown RBP20.88■□□□□ 0.93
SHANK3-203ENST00000445220 LRCH2Q5VUJ6 765 aa20.88■□□□□ 0.93
SHANK3-203ENST00000445220 SND1Q7KZF4 910 aaKnown RBP eCLIP20.88■□□□□ 0.93
SHANK3-203ENST00000445220 ACTN4O43707 911 aaKnown RBP20.88■□□□□ 0.93
SHANK3-203ENST00000445220 HLA-DOAP06340 250 aa20.88■□□□□ 0.93
SHANK3-203ENST00000445220 USP37Q86T82 979 aa20.88■□□□□ 0.93
SHANK3-203ENST00000445220 VSIG1Q86XK7 387 aa20.88■□□□□ 0.93
SHANK3-203ENST00000445220 RNF123Q5XPI4 1314 aa20.88■□□□□ 0.93
SHANK3-203ENST00000445220 RPGRIP1Q96KN7 1286 aa20.88■□□□□ 0.93
SHANK3-203ENST00000445220 AP1ARQ63HQ0 302 aa20.88■□□□□ 0.93
SHANK3-203ENST00000445220 LEO1Q8WVC0 666 aaPredicted RBP20.88■□□□□ 0.93
SHANK3-203ENST00000445220 ZRANB1Q9UGI0 708 aa20.88■□□□□ 0.93
SHANK3-203ENST00000445220 MAP7D1Q3KQU3 841 aa20.87■□□□□ 0.93
SHANK3-203ENST00000445220 FYB2Q5VWT5 728 aa20.87■□□□□ 0.93
SHANK3-203ENST00000445220 VAT1LQ9HCJ6 419 aa20.87■□□□□ 0.93
SHANK3-203ENST00000445220 EFCAB8A8MWE9 144 aa20.87■□□□□ 0.93
SHANK3-203ENST00000445220 ATP2A2P16615 1042 aaKnown RBP20.87■□□□□ 0.93
SHANK3-203ENST00000445220 TBX22Q9Y458 520 aa20.87■□□□□ 0.93
SHANK3-203ENST00000445220 MAST1Q9Y2H9 1570 aa20.87■□□□□ 0.93
SHANK3-203ENST00000445220 SLC39A6Q13433 755 aa20.87■□□□□ 0.93
SHANK3-203ENST00000445220 TSPYL6Q8N831 410 aa20.87■□□□□ 0.93
SHANK3-203ENST00000445220 EYA1Q99502 592 aa20.87■□□□□ 0.93
SHANK3-203ENST00000445220 FAM184BQ9ULE4 1060 aa20.87■□□□□ 0.93
SHANK3-203ENST00000445220 ATP6V0A2Q9Y487 856 aa20.87■□□□□ 0.93
SHANK3-203ENST00000445220 E7EVH7 732 aa20.87■□□□□ 0.93
SHANK3-203ENST00000445220 NLRP12P59046 1061 aa20.87■□□□□ 0.93
SHANK3-203ENST00000445220 WHAMMP3Q1A5X7 153 aa20.87■□□□□ 0.93
SHANK3-203ENST00000445220 IFIT1BQ5T764 474 aaKnown RBP20.86■□□□□ 0.93
SHANK3-203ENST00000445220 SECISBP2LQ93073 1101 aaKnown RBP20.86■□□□□ 0.93
SHANK3-203ENST00000445220 PPP1R2P41236 205 aa20.86■□□□□ 0.93
SHANK3-203ENST00000445220 GNAQP50148 359 aa20.86■□□□□ 0.93
SHANK3-203ENST00000445220 MLKLQ8NB16 471 aa20.86■□□□□ 0.93
SHANK3-203ENST00000445220 COMMD10Q9Y6G5 202 aa20.86■□□□□ 0.93
SHANK3-203ENST00000445220 TMEM110-MUSTN1A8MSY1 372 aa20.86■□□□□ 0.93
SHANK3-203ENST00000445220 BRD1O95696 1058 aa20.86■□□□□ 0.93
SHANK3-203ENST00000445220 RPAINQ86UA6 219 aa20.86■□□□□ 0.93
SHANK3-203ENST00000445220 DCAF5Q96JK2 942 aa20.86■□□□□ 0.93
SHANK3-203ENST00000445220 NBPF6Q5VWK0 638 aa20.86■□□□□ 0.93
SHANK3-203ENST00000445220 NBPF5PQ86XG9 351 aaPredicted RBP20.86■□□□□ 0.93
SHANK3-203ENST00000445220 JARID2Q92833 1246 aaPredicted RBP20.86■□□□□ 0.93
SHANK3-203ENST00000445220 NBPF4Q96M43 638 aa20.86■□□□□ 0.93
SHANK3-203ENST00000445220 CALML3P27482 149 aa20.85■□□□□ 0.93
SHANK3-203ENST00000445220 SLC8A1P32418 973 aa20.85■□□□□ 0.93
SHANK3-203ENST00000445220 TBC1D8BQ0IIM8 1120 aa20.85■□□□□ 0.93
SHANK3-203ENST00000445220 RGS22Q8NE09 1264 aa20.85■□□□□ 0.93
SHANK3-203ENST00000445220 PHACTR3Q96KR7 559 aa20.85■□□□□ 0.93
SHANK3-203ENST00000445220 TAOK1Q7L7X3 1001 aa20.85■□□□□ 0.93
SHANK3-203ENST00000445220 RFC4P35249 363 aa20.85■□□□□ 0.93
SHANK3-203ENST00000445220 KRT2P35908 639 aa20.85■□□□□ 0.93
SHANK3-203ENST00000445220 PLCB3Q01970 1234 aa20.85■□□□□ 0.93
SHANK3-203ENST00000445220 RAB3IL1Q8TBN0 382 aa20.85■□□□□ 0.93
SHANK3-203ENST00000445220 IP6K1Q92551 441 aa20.85■□□□□ 0.93
SHANK3-203ENST00000445220 GNGT1P63211 74 aa20.84■□□□□ 0.93
SHANK3-203ENST00000445220 SEL1L2Q5TEA6 688 aa20.84■□□□□ 0.93
SHANK3-203ENST00000445220 ARHGAP24Q8N264 748 aa20.84■□□□□ 0.93
SHANK3-203ENST00000445220 RNF10Q8N5U6 811 aaKnown RBP20.84■□□□□ 0.93
SHANK3-203ENST00000445220 MCUR1Q96AQ8 359 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms