RNA–Protein interactions for RNA: ENST00000444878.5

RBM39-216, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,124 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-216ENST00000444878 TMEM87BQ96K49 555 aa16.03■□□□□ 0.16
RBM39-216ENST00000444878 CFAP45Q9UL16 551 aa16.03■□□□□ 0.16
RBM39-216ENST00000444878 COL1A1P02452 1464 aaPredicted RBP16.03■□□□□ 0.16
RBM39-216ENST00000444878 CACNA1SQ13698 1873 aa16.03■□□□□ 0.16
RBM39-216ENST00000444878 UBR3Q6ZT12 1888 aa16.03■□□□□ 0.16
RBM39-216ENST00000444878 SH2B2O14492 632 aaPredicted RBP16.03■□□□□ 0.16
RBM39-216ENST00000444878 FBXO33Q7Z6M2 555 aa16.03■□□□□ 0.16
RBM39-216ENST00000444878 RAB11FIP4Q86YS3 637 aa16.03■□□□□ 0.16
RBM39-216ENST00000444878 CNNM2Q9H8M5 875 aa16.03■□□□□ 0.16
RBM39-216ENST00000444878 QTRT2Q9H974 415 aaKnown RBP16.03■□□□□ 0.16
RBM39-216ENST00000444878 LRRC4BQ9NT99 713 aa16.03■□□□□ 0.16
RBM39-216ENST00000444878 TNRC6CQ9HCJ0 1690 aaKnown RBP16.02■□□□□ 0.16
RBM39-216ENST00000444878 SEMA3EO15041 775 aa16.02■□□□□ 0.16
RBM39-216ENST00000444878 FDPSP14324 419 aaKnown RBP16.02■□□□□ 0.16
RBM39-216ENST00000444878 NFIXQ14938 502 aa16.02■□□□□ 0.16
RBM39-216ENST00000444878 AKNAD1Q5T1N1 836 aa16.02■□□□□ 0.16
RBM39-216ENST00000444878 MFSD6Q6ZSS7 791 aa16.02■□□□□ 0.16
RBM39-216ENST00000444878 FAM43AQ8N2R8 423 aa16.02■□□□□ 0.16
RBM39-216ENST00000444878 NKX2-3Q8TAU0 364 aa16.02■□□□□ 0.16
RBM39-216ENST00000444878 TIAM2Q8IVF5 1701 aa16.02■□□□□ 0.15
RBM39-216ENST00000444878 CCDC88AQ3V6T2 1871 aa16.02■□□□□ 0.15
RBM39-216ENST00000444878 BAZ2AQ9UIF9 1905 aaKnown RBP16.02■□□□□ 0.15
RBM39-216ENST00000444878 MAGEB6P1A0A0J9YX57 407 aa16.01■□□□□ 0.15
RBM39-216ENST00000444878 TM4SF1P30408 202 aa16.01■□□□□ 0.15
RBM39-216ENST00000444878 GUCY1B3Q02153 619 aa16.01■□□□□ 0.15
RBM39-216ENST00000444878 ADGRA1Q86SQ6 560 aa16.01■□□□□ 0.15
RBM39-216ENST00000444878 RNF214Q8ND24 703 aa16.01■□□□□ 0.15
RBM39-216ENST00000444878 PPP1R9BQ96SB3 815 aa16.01■□□□□ 0.15
RBM39-216ENST00000444878 KRT23Q9C075 422 aa16.01■□□□□ 0.15
RBM39-216ENST00000444878 INCENPQ9NQS7 918 aa16.01■□□□□ 0.15
RBM39-216ENST00000444878 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.01■□□□□ 0.15
RBM39-216ENST00000444878 KLRK1P26718 216 aa16.01■□□□□ 0.15
RBM39-216ENST00000444878 HIBADHP31937 336 aaKnown RBP16.01■□□□□ 0.15
RBM39-216ENST00000444878 CNBD1Q8NA66 436 aa16.01■□□□□ 0.15
RBM39-216ENST00000444878 ORC3Q9UBD5 711 aaPredicted RBP16.01■□□□□ 0.15
RBM39-216ENST00000444878 KDM4AO75164 1064 aa16■□□□□ 0.15
RBM39-216ENST00000444878 METAP2P50579 478 aaKnown RBP eCLIP16■□□□□ 0.15
RBM39-216ENST00000444878 TMEM67Q5HYA8 995 aa16■□□□□ 0.15
RBM39-216ENST00000444878 NFXL1Q6ZNB6 911 aa16■□□□□ 0.15
RBM39-216ENST00000444878 IGDCC4Q8TDY8 1250 aa16■□□□□ 0.15
RBM39-216ENST00000444878 C8orf76Q96K31 380 aa16■□□□□ 0.15
RBM39-216ENST00000444878 TFCP2L1Q9NZI6 479 aa16■□□□□ 0.15
RBM39-216ENST00000444878 ZSWIM5Q9P217 1185 aa16■□□□□ 0.15
RBM39-216ENST00000444878 BRWD3Q6RI45 1802 aa16■□□□□ 0.15
RBM39-216ENST00000444878 APOA5Q6Q788 366 aa16■□□□□ 0.15
RBM39-216ENST00000444878 STAG1Q8WVM7 1258 aa16■□□□□ 0.15
RBM39-216ENST00000444878 TOMM22Q9NS69 142 aa16■□□□□ 0.15
RBM39-216ENST00000444878 MYH2Q9UKX2 1941 aa16■□□□□ 0.15
RBM39-216ENST00000444878 IFIT3O14879 490 aaKnown RBP15.99■□□□□ 0.15
RBM39-216ENST00000444878 RRP12Q5JTH9 1297 aaKnown RBP15.99■□□□□ 0.15
RBM39-216ENST00000444878 CPLX2Q6PUV4 134 aaKnown RBP15.99■□□□□ 0.15
RBM39-216ENST00000444878 SDR42E1Q8WUS8 393 aa15.99■□□□□ 0.15
RBM39-216ENST00000444878 RNF41Q9H4P4 317 aaPredicted RBP15.99■□□□□ 0.15
RBM39-216ENST00000444878 ZBTB43O43298 467 aa15.98■□□□□ 0.15
RBM39-216ENST00000444878 CDKL5O76039 1030 aa15.98■□□□□ 0.15
RBM39-216ENST00000444878 LIG1P18858 919 aa15.98■□□□□ 0.15
RBM39-216ENST00000444878 LIFRP42702 1097 aa15.98■□□□□ 0.15
RBM39-216ENST00000444878 CEBPZQ03701 1054 aaKnown RBP15.98■□□□□ 0.15
RBM39-216ENST00000444878 ATL3Q6DD88 541 aa15.98■□□□□ 0.15
RBM39-216ENST00000444878 GIMAP6Q6P9H5 292 aa15.98■□□□□ 0.15
RBM39-216ENST00000444878 SGMS1Q86VZ5 419 aa15.98■□□□□ 0.15
RBM39-216ENST00000444878 MICU3Q86XE3 530 aa15.98■□□□□ 0.15
RBM39-216ENST00000444878 ZNF396Q96N95 335 aaPredicted RBP15.98■□□□□ 0.15
RBM39-216ENST00000444878 LY9Q9HBG7 655 aa15.98■□□□□ 0.15
RBM39-216ENST00000444878 PDS5AQ29RF7 1337 aaKnown RBP15.98■□□□□ 0.15
RBM39-216ENST00000444878 RXRAP19793 462 aa15.98■□□□□ 0.15
RBM39-216ENST00000444878 ADD1P35611 737 aaKnown RBP15.98■□□□□ 0.15
RBM39-216ENST00000444878 PPARAQ07869 468 aa15.98■□□□□ 0.15
RBM39-216ENST00000444878 GRAPQ13588 217 aa15.98■□□□□ 0.15
RBM39-216ENST00000444878 GRAPLQ8TC17 118 aaPredicted RBP15.98■□□□□ 0.15
RBM39-216ENST00000444878 BICD2Q8TD16 824 aa15.98■□□□□ 0.15
RBM39-216ENST00000444878 RIOK1Q9BRS2 568 aaKnown RBP15.98■□□□□ 0.15
RBM39-216ENST00000444878 SENP2Q9HC62 589 aa15.98■□□□□ 0.15
RBM39-216ENST00000444878 TACC3Q9Y6A5 838 aa15.98■□□□□ 0.15
RBM39-216ENST00000444878 MINDY4BA8MYZ0 360 aa15.97■□□□□ 0.15
RBM39-216ENST00000444878 SART3Q15020 963 aaKnown RBP15.97■□□□□ 0.15
RBM39-216ENST00000444878 SLC27A3Q5K4L6 730 aa15.97■□□□□ 0.15
RBM39-216ENST00000444878 STK11IPQ8N1F8 1099 aa15.97■□□□□ 0.15
RBM39-216ENST00000444878 FBXO18Q8NFZ0 1043 aa15.97■□□□□ 0.15
RBM39-216ENST00000444878 PGBD1Q96JS3 809 aa15.97■□□□□ 0.15
RBM39-216ENST00000444878 NUP62CLQ9H1M0 184 aa15.97■□□□□ 0.15
RBM39-216ENST00000444878 ANKIB1Q9P2G1 1089 aa15.97■□□□□ 0.15
RBM39-216ENST00000444878 CCDC69A6NI79 296 aa15.97■□□□□ 0.15
RBM39-216ENST00000444878 CHAF1AQ13111 956 aaPredicted RBP15.97■□□□□ 0.15
RBM39-216ENST00000444878 KRT27Q7Z3Y8 459 aa15.97■□□□□ 0.15
RBM39-216ENST00000444878 SLC12A7Q9Y666 1083 aa15.97■□□□□ 0.15
RBM39-216ENST00000444878 ERICH2A1L162 156 aa15.96■□□□□ 0.15
RBM39-216ENST00000444878 GOLGA8AA7E2F4 631 aa15.96■□□□□ 0.15
RBM39-216ENST00000444878 TRIM37O94972 964 aa15.96■□□□□ 0.15
RBM39-216ENST00000444878 DYNLL1P63167 89 aaKnown RBP15.96■□□□□ 0.15
RBM39-216ENST00000444878 OTUD7BQ6GQQ9 843 aa15.96■□□□□ 0.15
RBM39-216ENST00000444878 PRR5LQ6MZQ0 368 aa15.96■□□□□ 0.15
RBM39-216ENST00000444878 SYNE3Q6ZMZ3 975 aa15.96■□□□□ 0.15
RBM39-216ENST00000444878 CCDC144CPQ8IYA2 1237 aa15.96■□□□□ 0.15
RBM39-216ENST00000444878 NSUN4Q96CB9 384 aaKnown RBP15.96■□□□□ 0.15
RBM39-216ENST00000444878 USP28Q96RU2 1077 aa15.96■□□□□ 0.15
RBM39-216ENST00000444878 DACT1Q9NYF0 836 aa15.96■□□□□ 0.15
RBM39-216ENST00000444878 RCOR1Q9UKL0 485 aa15.96■□□□□ 0.15
RBM39-216ENST00000444878 GYS1P13807 737 aa15.95■□□□□ 0.14
RBM39-216ENST00000444878 TXNRD3Q86VQ6 643 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms