RNA–Protein interactions for RNA: ENST00000444268.1

COL28A1-204, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 5

Gene COL28A1, Length 1,755 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-204ENST00000444268 GOLGA8BA8MQT2 603 aa14.98□□□□□ -0.01
COL28A1-204ENST00000444268 CCT2P78371 535 aaKnown RBP14.98□□□□□ -0.01
COL28A1-204ENST00000444268 CRY2Q49AN0 593 aa14.98□□□□□ -0.01
COL28A1-204ENST00000444268 ANKRD18AQ8IVF6 992 aa14.98□□□□□ -0.01
COL28A1-204ENST00000444268 FUCA2Q9BTY2 467 aa14.98□□□□□ -0.01
COL28A1-204ENST00000444268 CNNM2Q9H8M5 875 aa14.98□□□□□ -0.01
COL28A1-204ENST00000444268 COL11A2P13942 1736 aaPredicted RBP14.98□□□□□ -0.01
COL28A1-204ENST00000444268 TIAM2Q8IVF5 1701 aa14.98□□□□□ -0.01
COL28A1-204ENST00000444268 CHD4Q14839 1912 aa14.98□□□□□ -0.01
COL28A1-204ENST00000444268 A0A0G2JLW4 131 aa14.98□□□□□ -0.01
COL28A1-204ENST00000444268 KLF18A0A0U1RQI7 1052 aa14.98□□□□□ -0.01
COL28A1-204ENST00000444268 CPLX1O14810 134 aa14.98□□□□□ -0.01
COL28A1-204ENST00000444268 CDKL5O76039 1030 aa14.98□□□□□ -0.01
COL28A1-204ENST00000444268 APPP05067 770 aa14.98□□□□□ -0.01
COL28A1-204ENST00000444268 RASGRF1Q13972 1273 aa14.98□□□□□ -0.01
COL28A1-204ENST00000444268 CPLX2Q6PUV4 134 aaKnown RBP14.98□□□□□ -0.01
COL28A1-204ENST00000444268 SLC16A10Q8TF71 515 aa14.98□□□□□ -0.01
COL28A1-204ENST00000444268 BRIP1Q9BX63 1249 aa14.98□□□□□ -0.01
COL28A1-204ENST00000444268 NACAP1Q9BZK3 213 aa14.98□□□□□ -0.01
COL28A1-204ENST00000444268 GNL3LQ9NVN8 582 aaKnown RBP14.98□□□□□ -0.01
COL28A1-204ENST00000444268 NOL7Q9UMY1 257 aaKnown RBP14.98□□□□□ -0.01
COL28A1-204ENST00000444268 ANGEL1Q9UNK9 670 aaKnown RBP14.98□□□□□ -0.01
COL28A1-204ENST00000444268 A0A1B0GUL6 1792 aa14.97□□□□□ -0.01
COL28A1-204ENST00000444268 WTIPA6NIX2 430 aaPredicted RBP14.97□□□□□ -0.01
COL28A1-204ENST00000444268 PATL2C9JE40 543 aaKnown RBP14.97□□□□□ -0.01
COL28A1-204ENST00000444268 FAM173BQ6P4H8 233 aa14.97□□□□□ -0.01
COL28A1-204ENST00000444268 BICD2Q8TD16 824 aa14.97□□□□□ -0.01
COL28A1-204ENST00000444268 RPGRQ92834 1020 aaKnown RBP14.97□□□□□ -0.01
COL28A1-204ENST00000444268 STRBPQ96SI9 672 aaKnown RBP14.97□□□□□ -0.01
COL28A1-204ENST00000444268 TNMDQ9H2S6 317 aa14.97□□□□□ -0.01
COL28A1-204ENST00000444268 NCOA5Q9HCD5 579 aaKnown RBP14.97□□□□□ -0.01
COL28A1-204ENST00000444268 TFIP11Q9UBB9 837 aaKnown RBP14.97□□□□□ -0.01
COL28A1-204ENST00000444268 KLRG2A4D1S0 409 aaPredicted RBP14.96□□□□□ -0.01
COL28A1-204ENST00000444268 DTNBO60941 627 aa14.96□□□□□ -0.01
COL28A1-204ENST00000444268 CAVIN2O95810 425 aa14.96□□□□□ -0.01
COL28A1-204ENST00000444268 RPS8P62241 208 aaKnown RBP14.96□□□□□ -0.01
COL28A1-204ENST00000444268 CHRNDQ07001 517 aa14.96□□□□□ -0.01
COL28A1-204ENST00000444268 GIMAP6Q6P9H5 292 aa14.96□□□□□ -0.01
COL28A1-204ENST00000444268 CHST3Q7LGC8 479 aa14.96□□□□□ -0.01
COL28A1-204ENST00000444268 RCOR1Q9UKL0 485 aa14.96□□□□□ -0.01
COL28A1-204ENST00000444268 WWC3Q9ULE0 1092 aa14.96□□□□□ -0.01
COL28A1-204ENST00000444268 RBM43Q6ZSC3 357 aaKnown RBP14.96□□□□□ -0.02
COL28A1-204ENST00000444268 BRAPQ7Z569 592 aa14.96□□□□□ -0.02
COL28A1-204ENST00000444268 MAGEB6Q8N7X4 407 aa14.96□□□□□ -0.02
COL28A1-204ENST00000444268 MTA3Q9BTC8 594 aa14.96□□□□□ -0.02
COL28A1-204ENST00000444268 NAPBQ9H115 298 aa14.96□□□□□ -0.02
COL28A1-204ENST00000444268 CLSTN2Q9H4D0 955 aa14.96□□□□□ -0.02
COL28A1-204ENST00000444268 BSDC1Q9NW68 430 aaPredicted RBP14.96□□□□□ -0.02
COL28A1-204ENST00000444268 CTAGE5O15320 804 aa14.95□□□□□ -0.02
COL28A1-204ENST00000444268 CHRNA5P30532 468 aa14.95□□□□□ -0.02
COL28A1-204ENST00000444268 ANTXR2P58335 489 aa14.95□□□□□ -0.02
COL28A1-204ENST00000444268 GRAPQ13588 217 aa14.95□□□□□ -0.02
COL28A1-204ENST00000444268 UBE4AQ14139 1066 aa14.95□□□□□ -0.02
COL28A1-204ENST00000444268 GRAPLQ8TC17 118 aaPredicted RBP14.95□□□□□ -0.02
COL28A1-204ENST00000444268 C8orf76Q96K31 380 aa14.95□□□□□ -0.02
COL28A1-204ENST00000444268 KRT23Q9C075 422 aa14.95□□□□□ -0.02
COL28A1-204ENST00000444268 DACT1Q9NYF0 836 aa14.95□□□□□ -0.02
COL28A1-204ENST00000444268 MINPP1Q9UNW1 487 aa14.95□□□□□ -0.02
COL28A1-204ENST00000444268 ZNF804BA4D1E1 1349 aa14.94□□□□□ -0.02
COL28A1-204ENST00000444268 PTMAP06454 111 aaKnown RBP14.94□□□□□ -0.02
COL28A1-204ENST00000444268 SRGNP10124 158 aa14.94□□□□□ -0.02
COL28A1-204ENST00000444268 LIG1P18858 919 aa14.94□□□□□ -0.02
COL28A1-204ENST00000444268 RBM17Q96I25 401 aaKnown RBP14.94□□□□□ -0.02
COL28A1-204ENST00000444268 MTFR1LQ9H019 292 aa14.94□□□□□ -0.02
COL28A1-204ENST00000444268 ORC3Q9UBD5 711 aaPredicted RBP14.94□□□□□ -0.02
COL28A1-204ENST00000444268 ZKSCAN5Q9Y2L8 839 aa14.94□□□□□ -0.02
COL28A1-204ENST00000444268 SH2B2O14492 632 aaPredicted RBP14.93□□□□□ -0.02
COL28A1-204ENST00000444268 MBD4O95243 580 aa14.93□□□□□ -0.02
COL28A1-204ENST00000444268 PDE6BP35913 854 aa14.93□□□□□ -0.02
COL28A1-204ENST00000444268 TPRNQ4KMQ1 711 aa14.93□□□□□ -0.02
COL28A1-204ENST00000444268 CAVIN4Q5BKX8 364 aa14.93□□□□□ -0.02
COL28A1-204ENST00000444268 TMED8Q6PL24 325 aaPredicted RBP14.93□□□□□ -0.02
COL28A1-204ENST00000444268 SGMS1Q86VZ5 419 aa14.93□□□□□ -0.02
COL28A1-204ENST00000444268 TBC1D10CQ8IV04 446 aa14.93□□□□□ -0.02
COL28A1-204ENST00000444268 IFNL3Q8IZI9 196 aa14.93□□□□□ -0.02
COL28A1-204ENST00000444268 FAM200AQ8TCP9 573 aa14.93□□□□□ -0.02
COL28A1-204ENST00000444268 NBPF3Q9H094 633 aa14.93□□□□□ -0.02
COL28A1-204ENST00000444268 HPS5Q9UPZ3 1129 aa14.93□□□□□ -0.02
COL28A1-204ENST00000444268 C10orf71Q711Q0 1435 aa14.93□□□□□ -0.02
COL28A1-204ENST00000444268 SEMA3EO15041 775 aa14.93□□□□□ -0.02
COL28A1-204ENST00000444268 KDM4AO75164 1064 aa14.93□□□□□ -0.02
COL28A1-204ENST00000444268 HOXA10P31260 410 aaPredicted RBP14.93□□□□□ -0.02
COL28A1-204ENST00000444268 ADD1P35611 737 aaKnown RBP14.93□□□□□ -0.02
COL28A1-204ENST00000444268 LIFRP42702 1097 aa14.93□□□□□ -0.02
COL28A1-204ENST00000444268 SART3Q15020 963 aaKnown RBP14.93□□□□□ -0.02
COL28A1-204ENST00000444268 CCDC73Q6ZRK6 1079 aa14.93□□□□□ -0.02
COL28A1-204ENST00000444268 C2CD5Q86YS7 1000 aa14.93□□□□□ -0.02
COL28A1-204ENST00000444268 FBXO18Q8NFZ0 1043 aa14.93□□□□□ -0.02
COL28A1-204ENST00000444268 PGBD1Q96JS3 809 aa14.93□□□□□ -0.02
COL28A1-204ENST00000444268 RNF41Q9H4P4 317 aaPredicted RBP14.93□□□□□ -0.02
COL28A1-204ENST00000444268 LRP2BPQ9P2M1 347 aa14.93□□□□□ -0.02
COL28A1-204ENST00000444268 ZNF500O60304 480 aaPredicted RBP14.92□□□□□ -0.02
COL28A1-204ENST00000444268 FDPSP14324 419 aaKnown RBP14.92□□□□□ -0.02
COL28A1-204ENST00000444268 METAP2P50579 478 aaKnown RBP eCLIP14.92□□□□□ -0.02
COL28A1-204ENST00000444268 SASS6Q6UVJ0 657 aa14.92□□□□□ -0.02
COL28A1-204ENST00000444268 OLFM4Q6UX06 510 aa14.92□□□□□ -0.02
COL28A1-204ENST00000444268 CACNA1SQ13698 1873 aa14.92□□□□□ -0.02
COL28A1-204ENST00000444268 YEATS4O95619 227 aa14.91□□□□□ -0.02
COL28A1-204ENST00000444268 TDO2P48775 406 aa14.91□□□□□ -0.02
COL28A1-204ENST00000444268 BCAMP50895 628 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms