RNA–Protein interactions for RNA: ENST00000443816.5

FN1-211, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,762 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-211ENST00000443816 OTUD7BQ6GQQ9 843 aa12.65□□□□□ -0.38
FN1-211ENST00000443816 MARCKSP29966 332 aaPredicted RBP12.65□□□□□ -0.38
FN1-211ENST00000443816 SLC1A4P43007 532 aa12.65□□□□□ -0.38
FN1-211ENST00000443816 SPOUT1Q5T280 376 aaKnown RBP12.65□□□□□ -0.38
FN1-211ENST00000443816 CEP85Q6P2H3 762 aa12.65□□□□□ -0.38
FN1-211ENST00000443816 ODF2LQ9ULJ1 636 aa12.65□□□□□ -0.38
FN1-211ENST00000443816 CCDC175P0C221 793 aa12.65□□□□□ -0.38
FN1-211ENST00000443816 MICALCLQ6ZW33 695 aa12.65□□□□□ -0.38
FN1-211ENST00000443816 CDC42BPAQ5VT25 1732 aa12.65□□□□□ -0.38
FN1-211ENST00000443816 SPTLC2O15270 562 aa12.65□□□□□ -0.38
FN1-211ENST00000443816 KIAA1524Q8TCG1 905 aa12.65□□□□□ -0.38
FN1-211ENST00000443816 DHX58Q96C10 678 aa12.65□□□□□ -0.38
FN1-211ENST00000443816 BCS1LQ9Y276 419 aa12.65□□□□□ -0.38
FN1-211ENST00000443816 RTL1A6NKG5 1358 aa12.65□□□□□ -0.39
FN1-211ENST00000443816 TXNDC16Q9P2K2 825 aa12.65□□□□□ -0.39
FN1-211ENST00000443816 SLU7O95391 586 aaKnown RBP12.64□□□□□ -0.39
FN1-211ENST00000443816 JAKMIP2Q96AA8 810 aa12.64□□□□□ -0.39
FN1-211ENST00000443816 PLCD1P51178 756 aa12.64□□□□□ -0.39
FN1-211ENST00000443816 SULF1Q8IWU6 871 aa12.64□□□□□ -0.39
FN1-211ENST00000443816 IQUBQ8NA54 791 aa12.64□□□□□ -0.39
FN1-211ENST00000443816 MYCLP12524 364 aaPredicted RBP12.64□□□□□ -0.39
FN1-211ENST00000443816 UVSSAQ2YD98 709 aa12.64□□□□□ -0.39
FN1-211ENST00000443816 RAB3IL1Q8TBN0 382 aa12.64□□□□□ -0.39
FN1-211ENST00000443816 TMEM2Q9UHN6 1383 aa12.64□□□□□ -0.39
FN1-211ENST00000443816 FAM196AQ6ZSG2 479 aa12.64□□□□□ -0.39
FN1-211ENST00000443816 CNKSR1Q969H4 720 aa12.64□□□□□ -0.39
FN1-211ENST00000443816 MLH3Q9UHC1 1453 aa12.64□□□□□ -0.39
FN1-211ENST00000443816 ZBTB24O43167 697 aaPredicted RBP12.64□□□□□ -0.39
FN1-211ENST00000443816 CALUO43852 315 aaPredicted RBP12.64□□□□□ -0.39
FN1-211ENST00000443816 VAMP4O75379 141 aa12.64□□□□□ -0.39
FN1-211ENST00000443816 TCP10Q12799 353 aa12.64□□□□□ -0.39
FN1-211ENST00000443816 TRPC3Q13507 836 aa12.64□□□□□ -0.39
FN1-211ENST00000443816 SNW1Q13573 536 aaKnown RBP12.64□□□□□ -0.39
FN1-211ENST00000443816 CCDC50Q8IVM0 306 aa12.64□□□□□ -0.39
FN1-211ENST00000443816 XAGE2Q96GT9 111 aa12.64□□□□□ -0.39
FN1-211ENST00000443816 CHST3Q7LGC8 479 aa12.63□□□□□ -0.39
FN1-211ENST00000443816 APPBP2Q92624 585 aa12.63□□□□□ -0.39
FN1-211ENST00000443816 TSGA10Q9BZW7 698 aa12.63□□□□□ -0.39
FN1-211ENST00000443816 PARD3Q8TEW0 1356 aa12.63□□□□□ -0.39
FN1-211ENST00000443816 DISP1Q96F81 1524 aa12.63□□□□□ -0.39
FN1-211ENST00000443816 CCDC169A6NNP5 214 aa12.63□□□□□ -0.39
FN1-211ENST00000443816 CEP63Q96MT8 703 aa12.63□□□□□ -0.39
FN1-211ENST00000443816 TBC1D2Q9BYX2 928 aa12.63□□□□□ -0.39
FN1-211ENST00000443816 PPFIA3O75145 1194 aa12.63□□□□□ -0.39
FN1-211ENST00000443816 CCT6AP40227 531 aaKnown RBP12.63□□□□□ -0.39
FN1-211ENST00000443816 ZMYND15Q9H091 742 aa12.63□□□□□ -0.39
FN1-211ENST00000443816 TARBP1Q13395 1621 aaKnown RBP12.63□□□□□ -0.39
FN1-211ENST00000443816 KRT83P78385 493 aa12.63□□□□□ -0.39
FN1-211ENST00000443816 DEXIO95424 95 aa12.63□□□□□ -0.39
FN1-211ENST00000443816 PPP2R5BQ15173 497 aa12.63□□□□□ -0.39
FN1-211ENST00000443816 FCHSD1Q86WN1 690 aa12.63□□□□□ -0.39
FN1-211ENST00000443816 NACA2Q9H009 215 aa12.63□□□□□ -0.39
FN1-211ENST00000443816 GDPD2Q9HCC8 539 aa12.63□□□□□ -0.39
FN1-211ENST00000443816 PNMA2Q9UL42 364 aa12.63□□□□□ -0.39
FN1-211ENST00000443816 KRT5P13647 590 aa12.63□□□□□ -0.39
FN1-211ENST00000443816 ATP2A2P16615 1042 aaKnown RBP12.63□□□□□ -0.39
FN1-211ENST00000443816 CTSWP56202 376 aa12.63□□□□□ -0.39
FN1-211ENST00000443816 CNNM4Q6P4Q7 775 aa12.63□□□□□ -0.39
FN1-211ENST00000443816 CTR9Q6PD62 1173 aa12.63□□□□□ -0.39
FN1-211ENST00000443816 ZSCAN30Q86W11 494 aa12.62□□□□□ -0.39
FN1-211ENST00000443816 TRMT1Q9NXH9 659 aaKnown RBP12.62□□□□□ -0.39
FN1-211ENST00000443816 ARHGEF35A5YM69 484 aa12.62□□□□□ -0.39
FN1-211ENST00000443816 APOBRQ0VD83 1088 aa12.62□□□□□ -0.39
FN1-211ENST00000443816 LETM2Q2VYF4 491 aa12.62□□□□□ -0.39
FN1-211ENST00000443816 TNNI3KQ59H18 835 aa12.62□□□□□ -0.39
FN1-211ENST00000443816 STMN4Q9H169 189 aaPredicted RBP12.62□□□□□ -0.39
FN1-211ENST00000443816 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.62□□□□□ -0.393e-21■■■■■ 48.7
FN1-211ENST00000443816 FPGT-TNNI3KV9GXZ4 949 aa12.62□□□□□ -0.39
FN1-211ENST00000443816 ATP2B4P23634 1241 aa12.62□□□□□ -0.39
FN1-211ENST00000443816 ZYXQ15942 572 aaKnown RBP12.62□□□□□ -0.39
FN1-211ENST00000443816 AKNAD1Q5T1N1 836 aa12.62□□□□□ -0.39
FN1-211ENST00000443816 TBC1D32Q96NH3 1257 aa12.62□□□□□ -0.39
FN1-211ENST00000443816 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.62□□□□□ -0.394e-6■■■□□ 15.9
FN1-211ENST00000443816 HSF2BPO75031 334 aa12.62□□□□□ -0.39
FN1-211ENST00000443816 SPECC1LQ69YQ0 1117 aa12.62□□□□□ -0.39
FN1-211ENST00000443816 C2CD5Q86YS7 1000 aa12.62□□□□□ -0.39
FN1-211ENST00000443816 GABPB2Q8TAK5 448 aaPredicted RBP12.62□□□□□ -0.39
FN1-211ENST00000443816 ADGRL2O95490 1459 aa12.62□□□□□ -0.39
FN1-211ENST00000443816 CDC42BPGQ6DT37 1551 aa12.62□□□□□ -0.39
FN1-211ENST00000443816 ADCY5O95622 1261 aa12.62□□□□□ -0.39
FN1-211ENST00000443816 CEP135Q66GS9 1140 aa12.62□□□□□ -0.39
FN1-211ENST00000443816 OTUD6AQ7L8S5 288 aa12.62□□□□□ -0.39
FN1-211ENST00000443816 CEP112Q8N8E3 955 aa12.62□□□□□ -0.39
FN1-211ENST00000443816 DCTPP1Q9H773 170 aa12.62□□□□□ -0.39
FN1-211ENST00000443816 NR1I2O75469 434 aa12.62□□□□□ -0.39
FN1-211ENST00000443816 DCAF17Q5H9S7 520 aaPredicted RBP12.62□□□□□ -0.39
FN1-211ENST00000443816 ZKSCAN3Q9BRR0 538 aa12.62□□□□□ -0.39
FN1-211ENST00000443816 TMEM110-MUSTN1A8MSY1 372 aa12.61□□□□□ -0.39
FN1-211ENST00000443816 TACC1O75410 805 aa12.61□□□□□ -0.39
FN1-211ENST00000443816 GCKRQ14397 625 aa12.61□□□□□ -0.39
FN1-211ENST00000443816 CHURC1Q8WUH1 139 aa12.61□□□□□ -0.39
FN1-211ENST00000443816 ARID5AQ03989 594 aa12.61□□□□□ -0.39
FN1-211ENST00000443816 KIF5AQ12840 1032 aa12.61□□□□□ -0.39
FN1-211ENST00000443816 MCTP2Q6DN12 878 aa12.61□□□□□ -0.39
FN1-211ENST00000443816 CCDC77Q9BR77 488 aa12.61□□□□□ -0.39
FN1-211ENST00000443816 NDC80O14777 642 aa12.61□□□□□ -0.39
FN1-211ENST00000443816 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.61□□□□□ -0.39
FN1-211ENST00000443816 BIRC3Q13489 604 aa12.61□□□□□ -0.39
FN1-211ENST00000443816 SPATA5Q8NB90 893 aa12.61□□□□□ -0.39
FN1-211ENST00000443816 ANGEL1Q9UNK9 670 aaKnown RBP12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms