RNA–Protein interactions for RNA: ENST00000441738.1

TIMP1-203, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

TSL 5

Gene TIMP1, Length 341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-203ENST00000441738 CDCA5Q96FF9 252 aa10.13□□□□□ -0.79
TIMP1-203ENST00000441738 ZDHHC15Q96MV8 337 aa10.13□□□□□ -0.79
TIMP1-203ENST00000441738 TEPSINQ96N21 525 aa10.13□□□□□ -0.79
TIMP1-203ENST00000441738 CHMP4BQ9H444 224 aaKnown RBP10.13□□□□□ -0.79
TIMP1-203ENST00000441738 ANTXR1Q9H6X2 564 aa10.13□□□□□ -0.79
TIMP1-203ENST00000441738 MYH8P13535 1937 aa10.13□□□□□ -0.79
TIMP1-203ENST00000441738 ATRNL1Q5VV63 1379 aa10.13□□□□□ -0.79
TIMP1-203ENST00000441738 RAB11FIP3O75154 756 aa10.12□□□□□ -0.79
TIMP1-203ENST00000441738 CHGBP05060 677 aa10.12□□□□□ -0.79
TIMP1-203ENST00000441738 MMP14P50281 582 aa10.12□□□□□ -0.79
TIMP1-203ENST00000441738 CACNB3P54284 484 aa10.12□□□□□ -0.79
TIMP1-203ENST00000441738 CDC37L1Q7L3B6 337 aa10.12□□□□□ -0.79
TIMP1-203ENST00000441738 OGFOD1Q8N543 542 aa10.12□□□□□ -0.79
TIMP1-203ENST00000441738 NSUN4Q96CB9 384 aaKnown RBP10.12□□□□□ -0.79
TIMP1-203ENST00000441738 EDC3Q96F86 508 aaKnown RBP10.12□□□□□ -0.79
TIMP1-203ENST00000441738 HHIPL1Q96JK4 782 aa10.12□□□□□ -0.79
TIMP1-203ENST00000441738 MRIQ9BWK5 157 aa10.12□□□□□ -0.79
TIMP1-203ENST00000441738 TDRD3Q9H7E2 651 aaKnown RBP10.12□□□□□ -0.79
TIMP1-203ENST00000441738 FZD1Q9UP38 647 aa10.12□□□□□ -0.79
TIMP1-203ENST00000441738 SUGT1Q9Y2Z0 365 aa10.12□□□□□ -0.79
TIMP1-203ENST00000441738 FRAT2O75474 233 aaPredicted RBP10.11□□□□□ -0.79
TIMP1-203ENST00000441738 RHBDL3P58872 404 aa10.11□□□□□ -0.79
TIMP1-203ENST00000441738 MECOMQ03112 1051 aa10.11□□□□□ -0.79
TIMP1-203ENST00000441738 NFIAQ12857 509 aa10.11□□□□□ -0.79
TIMP1-203ENST00000441738 DLGAP5Q15398 846 aa10.11□□□□□ -0.79
TIMP1-203ENST00000441738 HSP90AB4PQ58FF6 505 aa10.11□□□□□ -0.79
TIMP1-203ENST00000441738 TSHZ3Q63HK5 1081 aa10.11□□□□□ -0.79
TIMP1-203ENST00000441738 HHIPL2Q6UWX4 724 aa10.11□□□□□ -0.79
TIMP1-203ENST00000441738 MOB2Q70IA6 237 aa10.11□□□□□ -0.79
TIMP1-203ENST00000441738 CTU1Q7Z7A3 348 aaKnown RBP10.11□□□□□ -0.79
TIMP1-203ENST00000441738 SMC5Q8IY18 1101 aa10.11□□□□□ -0.79
TIMP1-203ENST00000441738 LRRCC1Q9C099 1032 aa10.11□□□□□ -0.79
TIMP1-203ENST00000441738 GNL3LQ9NVN8 582 aaKnown RBP10.11□□□□□ -0.79
TIMP1-203ENST00000441738 ZNF70Q9UC06 446 aaPredicted RBP10.11□□□□□ -0.79
TIMP1-203ENST00000441738 HDAC9Q9UKV0 1011 aa10.11□□□□□ -0.79
TIMP1-203ENST00000441738 HPS5Q9UPZ3 1129 aa10.11□□□□□ -0.79
TIMP1-203ENST00000441738 MROH7-TTC4A0A0A0MT08 1334 aa10.1□□□□□ -0.79
TIMP1-203ENST00000441738 CELF2O95319 508 aaKnown RBP10.1□□□□□ -0.79
TIMP1-203ENST00000441738 LDHBP07195 334 aaKnown RBP10.1□□□□□ -0.79
TIMP1-203ENST00000441738 UQCRFS1P1P0C7P4 283 aa10.1□□□□□ -0.79
TIMP1-203ENST00000441738 NOGQ13253 232 aa10.1□□□□□ -0.79
TIMP1-203ENST00000441738 SLFNL1Q499Z3 407 aa10.1□□□□□ -0.79
TIMP1-203ENST00000441738 TTC39AQ5SRH9 613 aa10.1□□□□□ -0.79
TIMP1-203ENST00000441738 CDC42EP5Q6NZY7 148 aa10.1□□□□□ -0.79
TIMP1-203ENST00000441738 ZFPM1Q8IX07 1006 aa10.1□□□□□ -0.79
TIMP1-203ENST00000441738 TEKT1Q969V4 418 aa10.1□□□□□ -0.79
TIMP1-203ENST00000441738 FAM163AQ96GL9 167 aaPredicted RBP10.1□□□□□ -0.79
TIMP1-203ENST00000441738 DDX4Q9NQI0 724 aaKnown RBP10.1□□□□□ -0.79
TIMP1-203ENST00000441738 FAM198AQ9UFP1 575 aa10.1□□□□□ -0.79
TIMP1-203ENST00000441738 ABCF2Q9UG63 623 aa10.1□□□□□ -0.79
TIMP1-203ENST00000441738 RPAP1Q9BWH6 1393 aaPredicted RBP10.1□□□□□ -0.79
TIMP1-203ENST00000441738 WDHD1O75717 1129 aaPredicted RBP10.09□□□□□ -0.79
TIMP1-203ENST00000441738 SLURP2P0DP57 97 aa10.09□□□□□ -0.79
TIMP1-203ENST00000441738 SH3BP5LQ7L8J4 393 aa10.09□□□□□ -0.79
TIMP1-203ENST00000441738 APOBEC3FQ8IUX4 373 aaKnown RBP10.09□□□□□ -0.79
TIMP1-203ENST00000441738 CLASRPQ8N2M8 674 aaKnown RBP10.09□□□□□ -0.79
TIMP1-203ENST00000441738 PI4K2BQ8TCG2 481 aa10.09□□□□□ -0.79
TIMP1-203ENST00000441738 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.09□□□□□ -0.79
TIMP1-203ENST00000441738 DCPSQ96C86 337 aaKnown RBP10.09□□□□□ -0.79
TIMP1-203ENST00000441738 TMEM39BQ9GZU3 492 aa10.09□□□□□ -0.79
TIMP1-203ENST00000441738 DEFB129Q9H1M3 183 aa10.09□□□□□ -0.79
TIMP1-203ENST00000441738 SAGE1Q9NXZ1 904 aa10.09□□□□□ -0.79
TIMP1-203ENST00000441738 COL2A1P02458 1487 aaPredicted RBP10.09□□□□□ -0.79
TIMP1-203ENST00000441738 GREB1LQ9C091 1923 aaPredicted RBP10.09□□□□□ -0.79
TIMP1-203ENST00000441738 MAST3O60307 1309 aa10.08□□□□□ -0.8
TIMP1-203ENST00000441738 GPR75-ASB3A0A0A6YYF3 556 aa10.08□□□□□ -0.8
TIMP1-203ENST00000441738 TCRBV5S4A2TA0A5A2 114 aa10.08□□□□□ -0.8
TIMP1-203ENST00000441738 ATP5JP18859 108 aa10.08□□□□□ -0.8
TIMP1-203ENST00000441738 RASA3Q14644 834 aa10.08□□□□□ -0.8
TIMP1-203ENST00000441738 CCDC158Q5M9N0 1113 aa10.08□□□□□ -0.8
TIMP1-203ENST00000441738 GORABQ5T7V8 394 aa10.08□□□□□ -0.8
TIMP1-203ENST00000441738 NBPF12Q5TAG4 269 aaPredicted RBP10.08□□□□□ -0.8
TIMP1-203ENST00000441738 SULF1Q8IWU6 871 aa10.08□□□□□ -0.8
TIMP1-203ENST00000441738 ZIC5Q96T25 663 aa10.08□□□□□ -0.8
TIMP1-203ENST00000441738 ZNF408Q9H9D4 720 aa10.08□□□□□ -0.8
TIMP1-203ENST00000441738 LAMA4Q16363 1823 aa10.07□□□□□ -0.8
TIMP1-203ENST00000441738 LOC285556D6RIA3 1793 aa10.07□□□□□ -0.8
TIMP1-203ENST00000441738 FAM155AB1AL88 458 aaPredicted RBP10.07□□□□□ -0.8
TIMP1-203ENST00000441738 TCP10L2B9ZVM9 353 aa10.07□□□□□ -0.8
TIMP1-203ENST00000441738 BTDP43251 543 aa10.07□□□□□ -0.8
TIMP1-203ENST00000441738 RBM5P52756 815 aaKnown RBP eCLIP10.07□□□□□ -0.8
TIMP1-203ENST00000441738 AAMPQ13685 434 aa10.07□□□□□ -0.8
TIMP1-203ENST00000441738 FKBP1CQ5VVH2 108 aa10.07□□□□□ -0.8
TIMP1-203ENST00000441738 ERICH6Q7L0X2 663 aa10.07□□□□□ -0.8
TIMP1-203ENST00000441738 HAUS7Q99871 368 aa10.07□□□□□ -0.8
TIMP1-203ENST00000441738 VEZTQ9HBM0 779 aa10.07□□□□□ -0.8
TIMP1-203ENST00000441738 GBA2Q9HCG7 927 aaPredicted RBP10.07□□□□□ -0.8
TIMP1-203ENST00000441738 GOLIM4O00461 696 aa10.06□□□□□ -0.8
TIMP1-203ENST00000441738 IFIT2P09913 472 aaKnown RBP10.06□□□□□ -0.8
TIMP1-203ENST00000441738 PDE4AP27815 886 aa10.06□□□□□ -0.8
TIMP1-203ENST00000441738 PKN2Q16513 984 aaKnown RBP10.06□□□□□ -0.8
TIMP1-203ENST00000441738 MAP3K11Q16584 847 aa10.06□□□□□ -0.8
TIMP1-203ENST00000441738 DZIP1Q86YF9 867 aaKnown RBP10.06□□□□□ -0.8
TIMP1-203ENST00000441738 ZGPATQ8N5A5 531 aaKnown RBP10.06□□□□□ -0.8
TIMP1-203ENST00000441738 RIOK1Q9BRS2 568 aaKnown RBP10.06□□□□□ -0.8
TIMP1-203ENST00000441738 IDI2Q9BXS1 227 aa10.06□□□□□ -0.8
TIMP1-203ENST00000441738 BCL11AQ9H165 835 aa10.06□□□□□ -0.8
TIMP1-203ENST00000441738 BOLA2Q9H3K6 86 aa10.06□□□□□ -0.8
TIMP1-203ENST00000441738 PPP2R3BQ9Y5P8 575 aa10.06□□□□□ -0.8
TIMP1-203ENST00000441738 ZSWIM8A7E2V4 1837 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms