RNA–Protein interactions for RNA: ENST00000441679.1

EPHA4-208, Transcript of EPH receptor A4, humanhuman

TSL 4

Gene EPHA4, Length 565 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-208ENST00000441679 FNDC3AQ9Y2H6 1198 aaKnown RBP9.76□□□□□ -0.85
EPHA4-208ENST00000441679 USP54Q70EL1 1684 aa9.76□□□□□ -0.85
EPHA4-208ENST00000441679 SLIT3O75094 1523 aa9.76□□□□□ -0.85
EPHA4-208ENST00000441679 ALS2Q96Q42 1657 aa9.75□□□□□ -0.85
EPHA4-208ENST00000441679 HTATSF1O43719 755 aaKnown RBP9.75□□□□□ -0.85
EPHA4-208ENST00000441679 LDHBP07195 334 aaKnown RBP9.75□□□□□ -0.85
EPHA4-208ENST00000441679 PLEKHO1Q53GL0 409 aaPredicted RBP9.75□□□□□ -0.85
EPHA4-208ENST00000441679 TOM1L2Q6ZVM7 507 aa9.75□□□□□ -0.85
EPHA4-208ENST00000441679 KLRG1Q96E93 195 aa9.75□□□□□ -0.85
EPHA4-208ENST00000441679 GAS2L1Q99501 681 aaPredicted RBP9.75□□□□□ -0.85
EPHA4-208ENST00000441679 NLRP2Q9NX02 1062 aa9.75□□□□□ -0.85
EPHA4-208ENST00000441679 KIAA1522Q9P206 1035 aaPredicted RBP9.75□□□□□ -0.85
EPHA4-208ENST00000441679 MED1Q15648 1581 aaPredicted RBP9.75□□□□□ -0.85
EPHA4-208ENST00000441679 KIAA0232Q92628 1395 aa9.75□□□□□ -0.85
EPHA4-208ENST00000441679 PIK3C2AO00443 1686 aa9.74□□□□□ -0.85
EPHA4-208ENST00000441679 OPLAHO14841 1288 aa9.74□□□□□ -0.85
EPHA4-208ENST00000441679 HMGB2P26583 209 aaKnown RBP9.74□□□□□ -0.85
EPHA4-208ENST00000441679 INPP5BP32019 993 aa9.74□□□□□ -0.85
EPHA4-208ENST00000441679 TAGLNQ01995 201 aaKnown RBP9.74□□□□□ -0.85
EPHA4-208ENST00000441679 EFHC2Q5JST6 749 aa9.74□□□□□ -0.85
EPHA4-208ENST00000441679 ZNF772Q68DY9 489 aaPredicted RBP9.74□□□□□ -0.85
EPHA4-208ENST00000441679 NLRP8Q86W28 1048 aa9.74□□□□□ -0.85
EPHA4-208ENST00000441679 CEP63Q96MT8 703 aa9.74□□□□□ -0.85
EPHA4-208ENST00000441679 CARD10Q9BWT7 1032 aa9.74□□□□□ -0.85
EPHA4-208ENST00000441679 CHMP4AQ9BY43 222 aa9.74□□□□□ -0.85
EPHA4-208ENST00000441679 RUBCNLQ9H714 662 aa9.74□□□□□ -0.85
EPHA4-208ENST00000441679 ATP13A2Q9NQ11 1180 aa9.74□□□□□ -0.85
EPHA4-208ENST00000441679 BTG4Q9NY30 223 aa9.74□□□□□ -0.85
EPHA4-208ENST00000441679 SPG7Q9UQ90 795 aa9.74□□□□□ -0.85
EPHA4-208ENST00000441679 MAP2P11137 1827 aaKnown RBP9.74□□□□□ -0.85
EPHA4-208ENST00000441679 PRPF40AO75400 957 aaKnown RBP9.73□□□□□ -0.85
EPHA4-208ENST00000441679 ADAMTS2O95450 1211 aa9.73□□□□□ -0.85
EPHA4-208ENST00000441679 HSP90AB1P08238 724 aaKnown RBP9.73□□□□□ -0.85
EPHA4-208ENST00000441679 FBLN1P23142 703 aa9.73□□□□□ -0.85
EPHA4-208ENST00000441679 SULT6B1Q6IMI4 303 aa9.73□□□□□ -0.85
EPHA4-208ENST00000441679 UNC5CLQ8IV45 518 aa9.73□□□□□ -0.85
EPHA4-208ENST00000441679 CMTR1Q8N1G2 835 aaKnown RBP9.73□□□□□ -0.85
EPHA4-208ENST00000441679 LTV1Q96GA3 475 aaPredicted RBP9.73□□□□□ -0.85
EPHA4-208ENST00000441679 RTCBQ9Y3I0 505 aaKnown RBP9.73□□□□□ -0.85
EPHA4-208ENST00000441679 WDR17Q8IZU2 1322 aa9.73□□□□□ -0.85
EPHA4-208ENST00000441679 PNMA6FA0A0J9YX94 578 aa9.72□□□□□ -0.85
EPHA4-208ENST00000441679 VAMP1P23763 118 aa9.72□□□□□ -0.85
EPHA4-208ENST00000441679 TYRO3Q06418 890 aa9.72□□□□□ -0.85
EPHA4-208ENST00000441679 LBRQ14739 615 aaKnown RBP9.72□□□□□ -0.85
EPHA4-208ENST00000441679 CHRNA2Q15822 529 aa9.72□□□□□ -0.85
EPHA4-208ENST00000441679 ENOX2Q16206 610 aaKnown RBP9.72□□□□□ -0.85
EPHA4-208ENST00000441679 ALG1LQ6GMV1 187 aa9.72□□□□□ -0.85
EPHA4-208ENST00000441679 RTF1Q92541 710 aaKnown RBP9.72□□□□□ -0.85
EPHA4-208ENST00000441679 AAASQ9NRG9 546 aa9.72□□□□□ -0.85
EPHA4-208ENST00000441679 IGSF1Q8N6C5 1336 aa9.72□□□□□ -0.85
EPHA4-208ENST00000441679 COL22A1Q8NFW1 1626 aaPredicted RBP9.71□□□□□ -0.85
EPHA4-208ENST00000441679 CENPBP07199 599 aaPredicted RBP9.71□□□□□ -0.86
EPHA4-208ENST00000441679 C1orf141Q5JVX7 400 aa9.71□□□□□ -0.86
EPHA4-208ENST00000441679 SAMD5Q5TGI4 173 aa9.71□□□□□ -0.86
EPHA4-208ENST00000441679 TCP11L2Q8N4U5 519 aa9.71□□□□□ -0.86
EPHA4-208ENST00000441679 STRN4Q9NRL3 753 aa9.71□□□□□ -0.86
EPHA4-208ENST00000441679 NFAT5O94916 1531 aa9.71□□□□□ -0.86
EPHA4-208ENST00000441679 COL16A1Q07092 1604 aaPredicted RBP9.71□□□□□ -0.86
EPHA4-208ENST00000441679 A6NHS1 94 aa9.7□□□□□ -0.86
EPHA4-208ENST00000441679 EXOC5O00471 708 aa9.7□□□□□ -0.86
EPHA4-208ENST00000441679 ST8SIA5O15466 376 aa9.7□□□□□ -0.86
EPHA4-208ENST00000441679 IL2RBP14784 551 aa9.7□□□□□ -0.86
EPHA4-208ENST00000441679 PRKAR2BP31323 418 aa9.7□□□□□ -0.86
EPHA4-208ENST00000441679 HNRNPUQ00839 825 aaKnown RBP eCLIP9.7□□□□□ -0.86
EPHA4-208ENST00000441679 CCDC184Q52MB2 194 aa9.7□□□□□ -0.86
EPHA4-208ENST00000441679 NBPF6Q5VWK0 638 aa9.7□□□□□ -0.86
EPHA4-208ENST00000441679 PDE12Q6L8Q7 609 aaKnown RBP9.7□□□□□ -0.86
EPHA4-208ENST00000441679 FIGNL1Q6PIW4 674 aa9.7□□□□□ -0.86
EPHA4-208ENST00000441679 ZNF438Q7Z4V0 828 aa9.7□□□□□ -0.86
EPHA4-208ENST00000441679 WDR63Q8IWG1 891 aa9.7□□□□□ -0.86
EPHA4-208ENST00000441679 NBPF4Q96M43 638 aa9.7□□□□□ -0.86
EPHA4-208ENST00000441679 C8orf37Q96NL8 207 aa9.7□□□□□ -0.86
EPHA4-208ENST00000441679 CSRNP1Q96S65 589 aa9.7□□□□□ -0.86
EPHA4-208ENST00000441679 DNAJC25Q9H1X3 360 aa9.7□□□□□ -0.86
EPHA4-208ENST00000441679 USP21Q9UK80 565 aa9.7□□□□□ -0.86
EPHA4-208ENST00000441679 TRPC5Q9UL62 973 aaPredicted RBP9.7□□□□□ -0.86
EPHA4-208ENST00000441679 USP20Q9Y2K6 914 aa9.7□□□□□ -0.86
EPHA4-208ENST00000441679 PHRF1Q9P1Y6 1649 aaKnown RBP9.7□□□□□ -0.86
EPHA4-208ENST00000441679 KDRP35968 1356 aa9.69□□□□□ -0.86
EPHA4-208ENST00000441679 RIPK4P57078 832 aa9.69□□□□□ -0.86
EPHA4-208ENST00000441679 SHPRHQ149N8 1683 aa9.69□□□□□ -0.86
EPHA4-208ENST00000441679 VPS72Q15906 364 aa9.69□□□□□ -0.86
EPHA4-208ENST00000441679 XKR5Q6UX68 686 aa9.69□□□□□ -0.86
EPHA4-208ENST00000441679 RIPOR1Q6ZS17 1223 aa9.69□□□□□ -0.86
EPHA4-208ENST00000441679 FBF1Q8TES7 1133 aa9.69□□□□□ -0.86
EPHA4-208ENST00000441679 PLEKHF1Q96S99 279 aa9.69□□□□□ -0.86
EPHA4-208ENST00000441679 SENP2Q9HC62 589 aa9.69□□□□□ -0.86
EPHA4-208ENST00000441679 BRD7Q9NPI1 651 aa9.69□□□□□ -0.86
EPHA4-208ENST00000441679 C11orf16Q9NQ32 467 aa9.69□□□□□ -0.86
EPHA4-208ENST00000441679 BABAM1Q9NWV8 329 aa9.69□□□□□ -0.86
EPHA4-208ENST00000441679 CRB1P82279 1406 aa9.68□□□□□ -0.86
EPHA4-208ENST00000441679 SENP3-EIF4A1A0A087X0R7 540 aa9.68□□□□□ -0.86
EPHA4-208ENST00000441679 GNAT3A8MTJ3 354 aa9.68□□□□□ -0.86
EPHA4-208ENST00000441679 EIF1AYO14602 144 aaKnown RBP9.68□□□□□ -0.86
EPHA4-208ENST00000441679 APAF1O14727 1248 aa9.68□□□□□ -0.86
EPHA4-208ENST00000441679 CPNE3O75131 537 aaKnown RBP9.68□□□□□ -0.86
EPHA4-208ENST00000441679 HMOX1P09601 288 aa9.68□□□□□ -0.86
EPHA4-208ENST00000441679 ORC1Q13415 861 aa9.68□□□□□ -0.86
EPHA4-208ENST00000441679 NFE2L2Q16236 605 aa9.68□□□□□ -0.86
EPHA4-208ENST00000441679 AKAP4Q5JQC9 854 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms