RNA–Protein interactions for RNA: ENST00000441542.6

HDAC9-214, Transcript of histone deacetylase 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HDAC9, Length 3,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-214ENST00000441542 A0A087WUV0 522 aaPredicted RBP8.58□□□□□ -1.04
HDAC9-214ENST00000441542 MAP2K7O14733 419 aa8.58□□□□□ -1.04
HDAC9-214ENST00000441542 CDC27P30260 824 aa8.58□□□□□ -1.04
HDAC9-214ENST00000441542 INPP5BP32019 993 aa8.58□□□□□ -1.04
HDAC9-214ENST00000441542 ATP1A2P50993 1020 aa8.58□□□□□ -1.04
HDAC9-214ENST00000441542 ADALQ6DHV7 355 aa8.58□□□□□ -1.04
HDAC9-214ENST00000441542 CPLX2Q6PUV4 134 aaKnown RBP8.58□□□□□ -1.04
HDAC9-214ENST00000441542 PPFIBP1Q86W92 1011 aa8.58□□□□□ -1.04
HDAC9-214ENST00000441542 LINC00301Q8NCQ3 95 aa8.58□□□□□ -1.04
HDAC9-214ENST00000441542 CAGE1Q8TC20 777 aa8.58□□□□□ -1.04
HDAC9-214ENST00000441542 ACBD3Q9H3P7 528 aa8.58□□□□□ -1.04
HDAC9-214ENST00000441542 INTS13Q9NVM9 706 aa8.58□□□□□ -1.04
HDAC9-214ENST00000441542 HDAC6Q9UBN7 1215 aa8.58□□□□□ -1.04
HDAC9-214ENST00000441542 GUCA1BQ9UMX6 200 aa8.58□□□□□ -1.04
HDAC9-214ENST00000441542 L1RE1Q9UN81 338 aa8.58□□□□□ -1.04
HDAC9-214ENST00000441542 MAP3K2Q9Y2U5 619 aa8.58□□□□□ -1.04
HDAC9-214ENST00000441542 RPGRIP1LQ68CZ1 1315 aa8.58□□□□□ -1.04
HDAC9-214ENST00000441542 CTAGE9A4FU28 777 aa8.58□□□□□ -1.04
HDAC9-214ENST00000441542 RDXP35241 583 aaKnown RBP8.58□□□□□ -1.04
HDAC9-214ENST00000441542 PIP4K2AP48426 406 aaPredicted RBP8.58□□□□□ -1.04
HDAC9-214ENST00000441542 KAT14Q9H8E8 782 aa8.58□□□□□ -1.04
HDAC9-214ENST00000441542 CPSF1Q10570 1443 aaKnown RBP8.58□□□□□ -1.04
HDAC9-214ENST00000441542 TEX33O43247 280 aa8.58□□□□□ -1.04
HDAC9-214ENST00000441542 NEBLO76041 1014 aa8.58□□□□□ -1.04
HDAC9-214ENST00000441542 SASH1O94885 1247 aa8.58□□□□□ -1.04
HDAC9-214ENST00000441542 MAP9Q49MG5 647 aa8.58□□□□□ -1.04
HDAC9-214ENST00000441542 RAD9BQ6WBX8 426 aa8.58□□□□□ -1.04
HDAC9-214ENST00000441542 RPAINQ86UA6 219 aa8.58□□□□□ -1.04
HDAC9-214ENST00000441542 CCDC82Q8N4S0 544 aa8.58□□□□□ -1.04
HDAC9-214ENST00000441542 PRPF38AQ8NAV1 312 aaKnown RBP8.58□□□□□ -1.04
HDAC9-214ENST00000441542 FAM71BQ8TC56 605 aa8.58□□□□□ -1.04
HDAC9-214ENST00000441542 TRIM10Q9UDY6 481 aa8.58□□□□□ -1.04
HDAC9-214ENST00000441542 CDC23Q9UJX2 597 aa8.58□□□□□ -1.04
HDAC9-214ENST00000441542 PCDHA5Q9Y5H7 936 aa8.58□□□□□ -1.04
HDAC9-214ENST00000441542 MROH7-TTC4A0A0A0MT08 1334 aa8.57□□□□□ -1.04
HDAC9-214ENST00000441542 EPB41L2O43491 1005 aaKnown RBP8.57□□□□□ -1.04
HDAC9-214ENST00000441542 GGCXP38435 758 aa8.57□□□□□ -1.04
HDAC9-214ENST00000441542 CCT6AP40227 531 aaKnown RBP8.57□□□□□ -1.04
HDAC9-214ENST00000441542 GNGT1P63211 74 aa8.57□□□□□ -1.04
HDAC9-214ENST00000441542 KCTD16Q68DU8 428 aa8.57□□□□□ -1.04
HDAC9-214ENST00000441542 TC2NQ8N9U0 490 aa8.57□□□□□ -1.04
HDAC9-214ENST00000441542 EYA1Q99502 592 aa8.57□□□□□ -1.04
HDAC9-214ENST00000441542 SLF1Q9BQI6 1058 aa8.57□□□□□ -1.04
HDAC9-214ENST00000441542 GOLGA8BA8MQT2 603 aa8.57□□□□□ -1.04
HDAC9-214ENST00000441542 KIF28PB7ZC32 967 aa8.57□□□□□ -1.04
HDAC9-214ENST00000441542 CASP1P29466 404 aa8.57□□□□□ -1.04
HDAC9-214ENST00000441542 CDC25AP30304 524 aa8.57□□□□□ -1.04
HDAC9-214ENST00000441542 CEP112Q8N8E3 955 aa8.57□□□□□ -1.04
HDAC9-214ENST00000441542 IQUBQ8NA54 791 aa8.57□□□□□ -1.04
HDAC9-214ENST00000441542 IL17REQ8NFR9 667 aa8.57□□□□□ -1.04
HDAC9-214ENST00000441542 PSMB7Q99436 277 aa8.57□□□□□ -1.04
HDAC9-214ENST00000441542 HSD3B7Q9H2F3 369 aa8.57□□□□□ -1.04
HDAC9-214ENST00000441542 HOOK1Q9UJC3 728 aaKnown RBP8.57□□□□□ -1.04
HDAC9-214ENST00000441542 GNAT3A8MTJ3 354 aa8.56□□□□□ -1.04
HDAC9-214ENST00000441542 HIP1O00291 1037 aa8.56□□□□□ -1.04
HDAC9-214ENST00000441542 GOLIM4O00461 696 aa8.56□□□□□ -1.04
HDAC9-214ENST00000441542 TUBB4AP04350 444 aa8.56□□□□□ -1.04
HDAC9-214ENST00000441542 DNA2P51530 1060 aa8.56□□□□□ -1.04
HDAC9-214ENST00000441542 FMR1Q06787 632 aaKnown RBP eCLIP8.56□□□□□ -1.04
HDAC9-214ENST00000441542 KRT32Q14532 448 aa8.56□□□□□ -1.04
HDAC9-214ENST00000441542 KCTD19Q17RG1 926 aaPredicted RBP8.56□□□□□ -1.04
HDAC9-214ENST00000441542 PROSER3Q2NL68 480 aa8.56□□□□□ -1.04
HDAC9-214ENST00000441542 NAA16Q6N069 864 aaPredicted RBP8.56□□□□□ -1.04
HDAC9-214ENST00000441542 CCDC125Q86Z20 511 aa8.56□□□□□ -1.04
HDAC9-214ENST00000441542 TMEM139Q8IV31 216 aa8.56□□□□□ -1.04
HDAC9-214ENST00000441542 ATP7BP35670 1465 aa8.56□□□□□ -1.04
HDAC9-214ENST00000441542 SHTN1A0MZ66 631 aa8.56□□□□□ -1.04
HDAC9-214ENST00000441542 PRAMEF22A3QJZ6 481 aa8.56□□□□□ -1.04
HDAC9-214ENST00000441542 GOLGA6CA6NDK9 693 aa8.56□□□□□ -1.04
HDAC9-214ENST00000441542 WASLO00401 505 aaPredicted RBP8.56□□□□□ -1.04
HDAC9-214ENST00000441542 GIGYF1O75420 1035 aaPredicted RBP8.56□□□□□ -1.04
HDAC9-214ENST00000441542 SKAP2O75563 359 aaPredicted RBP8.56□□□□□ -1.04
HDAC9-214ENST00000441542 KIAA0754O94854 1291 aa8.56□□□□□ -1.04
HDAC9-214ENST00000441542 GOLGA6DP0CG33 693 aa8.56□□□□□ -1.04
HDAC9-214ENST00000441542 EIF5P55010 431 aaKnown RBP8.56□□□□□ -1.04
HDAC9-214ENST00000441542 STIM1Q13586 685 aa8.56□□□□□ -1.04
HDAC9-214ENST00000441542 E2F5Q15329 346 aa8.56□□□□□ -1.04
HDAC9-214ENST00000441542 BEND3Q5T5X7 828 aa8.56□□□□□ -1.04
HDAC9-214ENST00000441542 MYSM1Q5VVJ2 828 aa8.56□□□□□ -1.04
HDAC9-214ENST00000441542 ANO1Q5XXA6 986 aa8.56□□□□□ -1.04
HDAC9-214ENST00000441542 SPECC1LQ69YQ0 1117 aa8.56□□□□□ -1.04
HDAC9-214ENST00000441542 KCNV1Q6PIU1 500 aa8.56□□□□□ -1.04
HDAC9-214ENST00000441542 SMYD4Q8IYR2 804 aaPredicted RBP8.56□□□□□ -1.04
HDAC9-214ENST00000441542 FAM76AQ8TAV0 307 aa8.56□□□□□ -1.04
HDAC9-214ENST00000441542 STAMQ92783 540 aa8.56□□□□□ -1.04
HDAC9-214ENST00000441542 SUCLG2Q96I99 432 aa8.56□□□□□ -1.04
HDAC9-214ENST00000441542 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.56□□□□□ -1.04
HDAC9-214ENST00000441542 KCND1Q9NSA2 647 aa8.56□□□□□ -1.04
HDAC9-214ENST00000441542 GOLGA6AQ9NYA3 693 aa8.56□□□□□ -1.04
HDAC9-214ENST00000441542 KLF18A0A0U1RQI7 1052 aa8.56□□□□□ -1.04
HDAC9-214ENST00000441542 PFKFB2O60825 505 aa8.56□□□□□ -1.04
HDAC9-214ENST00000441542 AFMP43652 599 aa8.56□□□□□ -1.04
HDAC9-214ENST00000441542 RBL2Q08999 1139 aa8.56□□□□□ -1.04
HDAC9-214ENST00000441542 PDCLQ13371 301 aa8.56□□□□□ -1.04
HDAC9-214ENST00000441542 TSHZ1Q6ZSZ6 1077 aa8.56□□□□□ -1.04
HDAC9-214ENST00000441542 DHX32Q7L7V1 743 aaKnown RBP8.56□□□□□ -1.04
HDAC9-214ENST00000441542 KCNG4Q8TDN1 519 aa8.56□□□□□ -1.04
HDAC9-214ENST00000441542 N4BP2L2Q92802 583 aaPredicted RBP8.56□□□□□ -1.04
HDAC9-214ENST00000441542 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.56□□□□□ -1.04
HDAC9-214ENST00000441542 RIPOR2Q9Y4F9 1068 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms