RNA–Protein interactions for RNA: ENST00000439958.7

CPSF7-205, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF7, Length 3,524 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-205ENST00000439958 PDE6BP35913 854 aa17.73■□□□□ 0.43
CPSF7-205ENST00000439958 GRIK5Q16478 980 aa17.73■□□□□ 0.43
CPSF7-205ENST00000439958 CAVIN1Q6NZI2 390 aaKnown RBP17.73■□□□□ 0.43
CPSF7-205ENST00000439958 TBC1D16Q8TBP0 767 aa17.73■□□□□ 0.43
CPSF7-205ENST00000439958 H0YIN7 160 aa17.72■□□□□ 0.43
CPSF7-205ENST00000439958 BRD1O95696 1058 aa17.72■□□□□ 0.43
CPSF7-205ENST00000439958 LY75O60449 1722 aa17.72■□□□□ 0.43
CPSF7-205ENST00000439958 MYO5AQ9Y4I1 1855 aaKnown RBP17.72■□□□□ 0.43
CPSF7-205ENST00000439958 USP17L12C9JPN9 530 aa17.72■□□□□ 0.43
CPSF7-205ENST00000439958 USP17L21D6R901 530 aa17.72■□□□□ 0.43
CPSF7-205ENST00000439958 ZSCAN22P10073 491 aaPredicted RBP17.72■□□□□ 0.43
CPSF7-205ENST00000439958 HMGB2P26583 209 aaKnown RBP17.72■□□□□ 0.43
CPSF7-205ENST00000439958 NKX2-3Q8TAU0 364 aa17.72■□□□□ 0.43
CPSF7-205ENST00000439958 GTF3C6Q969F1 213 aa17.72■□□□□ 0.43
CPSF7-205ENST00000439958 NSUN4Q96CB9 384 aaKnown RBP17.72■□□□□ 0.43
CPSF7-205ENST00000439958 CD209Q9NNX6 404 aa17.72■□□□□ 0.43
CPSF7-205ENST00000439958 MCM9Q9NXL9 1143 aa17.72■□□□□ 0.43
CPSF7-205ENST00000439958 COL1A1P02452 1464 aaPredicted RBP17.72■□□□□ 0.43
CPSF7-205ENST00000439958 CRY2Q49AN0 593 aa17.72■□□□□ 0.43
CPSF7-205ENST00000439958 CDC37L1Q7L3B6 337 aa17.72■□□□□ 0.43
CPSF7-205ENST00000439958 DBNDD1Q9H9R9 158 aa17.72■□□□□ 0.43
CPSF7-205ENST00000439958 SAP30BPQ9UHR5 308 aaKnown RBP17.72■□□□□ 0.43
CPSF7-205ENST00000439958 SRGNP10124 158 aa17.71■□□□□ 0.43
CPSF7-205ENST00000439958 ATP2B4P23634 1241 aa17.71■□□□□ 0.43
CPSF7-205ENST00000439958 CYB5R4Q7L1T6 521 aa17.71■□□□□ 0.43
CPSF7-205ENST00000439958 MXD3Q9BW11 206 aa17.71■□□□□ 0.43
CPSF7-205ENST00000439958 CNPY2Q9Y2B0 182 aa17.71■□□□□ 0.43
CPSF7-205ENST00000439958 ERICH2A1L162 156 aa17.71■□□□□ 0.43
CPSF7-205ENST00000439958 GNAT2P19087 354 aa17.71■□□□□ 0.43
CPSF7-205ENST00000439958 UBAC1Q9BSL1 405 aa17.71■□□□□ 0.43
CPSF7-205ENST00000439958 PTPDC1A2A3K4 754 aa17.71■□□□□ 0.42
CPSF7-205ENST00000439958 EVX2Q03828 476 aa17.71■□□□□ 0.42
CPSF7-205ENST00000439958 CRNKL1Q9BZJ0 848 aaKnown RBP17.71■□□□□ 0.42
CPSF7-205ENST00000439958 SENP2Q9HC62 589 aa17.71■□□□□ 0.42
CPSF7-205ENST00000439958 AKAP11Q9UKA4 1901 aa17.7■□□□□ 0.42
CPSF7-205ENST00000439958 NPR1P16066 1061 aa17.7■□□□□ 0.42
CPSF7-205ENST00000439958 SPTY2D1Q68D10 685 aaPredicted RBP17.7■□□□□ 0.42
CPSF7-205ENST00000439958 WDR66Q8TBY9 1149 aa17.7■□□□□ 0.42
CPSF7-205ENST00000439958 NBPF3Q9H094 633 aa17.7■□□□□ 0.42
CPSF7-205ENST00000439958 C4AP0C0L4 1744 aa17.7■□□□□ 0.42
CPSF7-205ENST00000439958 ZBTB7AO95365 584 aa17.7■□□□□ 0.42
CPSF7-205ENST00000439958 PPARAQ07869 468 aa17.7■□□□□ 0.42
CPSF7-205ENST00000439958 IL17RAQ96F46 866 aa17.7■□□□□ 0.42
CPSF7-205ENST00000439958 TFIP11Q9UBB9 837 aaKnown RBP17.7■□□□□ 0.42
CPSF7-205ENST00000439958 CCDC69A6NI79 296 aa17.69■□□□□ 0.42
CPSF7-205ENST00000439958 PDIA3P30101 505 aaKnown RBP17.69■□□□□ 0.42
CPSF7-205ENST00000439958 DNM1Q05193 864 aaKnown RBP17.69■□□□□ 0.42
CPSF7-205ENST00000439958 AKNAD1Q5T1N1 836 aa17.69■□□□□ 0.42
CPSF7-205ENST00000439958 OTUD7BQ6GQQ9 843 aa17.69■□□□□ 0.42
CPSF7-205ENST00000439958 ZNF384Q8TF68 577 aa17.69■□□□□ 0.42
CPSF7-205ENST00000439958 ZSWIM5Q9P217 1185 aa17.69■□□□□ 0.42
CPSF7-205ENST00000439958 CYP2D6P10635 497 aa17.69■□□□□ 0.42
CPSF7-205ENST00000439958 ANTXR2P58335 489 aa17.69■□□□□ 0.42
CPSF7-205ENST00000439958 SYNE3Q6ZMZ3 975 aa17.69■□□□□ 0.42
CPSF7-205ENST00000439958 RBM27Q9P2N5 1060 aaKnown RBP17.69■□□□□ 0.42
CPSF7-205ENST00000439958 BRPF3Q9ULD4 1205 aa17.69■□□□□ 0.42
CPSF7-205ENST00000439958 PDCP20941 246 aa17.69■□□□□ 0.42
CPSF7-205ENST00000439958 ALDH1B1P30837 517 aa17.69■□□□□ 0.42
CPSF7-205ENST00000439958 SCNN1DP51172 638 aa17.69■□□□□ 0.42
CPSF7-205ENST00000439958 EXOSC10Q01780 885 aaKnown RBP17.69■□□□□ 0.42
CPSF7-205ENST00000439958 MAPKAPK5Q8IW41 473 aa17.69■□□□□ 0.42
CPSF7-205ENST00000439958 MB21D2Q8IYB1 491 aaPredicted RBP17.69■□□□□ 0.42
CPSF7-205ENST00000439958 PIBF1Q8WXW3 757 aa17.69■□□□□ 0.42
CPSF7-205ENST00000439958 TNRC6CQ9HCJ0 1690 aaKnown RBP17.69■□□□□ 0.42
CPSF7-205ENST00000439958 SEMA3EO15041 775 aa17.68■□□□□ 0.42
CPSF7-205ENST00000439958 F13A1P00488 732 aa17.68■□□□□ 0.42
CPSF7-205ENST00000439958 RBM5P52756 815 aaKnown RBP eCLIP17.68■□□□□ 0.42
CPSF7-205ENST00000439958 PICALMQ13492 652 aa17.68■□□□□ 0.42
CPSF7-205ENST00000439958 SART3Q15020 963 aaKnown RBP17.68■□□□□ 0.42
CPSF7-205ENST00000439958 TGFBRAP1Q8WUH2 860 aa17.68■□□□□ 0.42
CPSF7-205ENST00000439958 MASTLQ96GX5 879 aa17.68■□□□□ 0.42
CPSF7-205ENST00000439958 ANGEL1Q9UNK9 670 aaKnown RBP17.68■□□□□ 0.42
CPSF7-205ENST00000439958 ATF5Q9Y2D1 282 aaPredicted RBP17.68■□□□□ 0.42
CPSF7-205ENST00000439958 CMTR1Q8N1G2 835 aaKnown RBP17.68■□□□□ 0.42
CPSF7-205ENST00000439958 CRAMP1Q96RY5 1269 aa17.68■□□□□ 0.42
CPSF7-205ENST00000439958 SLC12A7Q9Y666 1083 aa17.68■□□□□ 0.42
CPSF7-205ENST00000439958 ADD1P35611 737 aaKnown RBP17.67■□□□□ 0.42
CPSF7-205ENST00000439958 METAP2P50579 478 aaKnown RBP eCLIP17.67■□□□□ 0.42
CPSF7-205ENST00000439958 CAMKK2Q96RR4 588 aa17.67■□□□□ 0.42
CPSF7-205ENST00000439958 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.67■□□□□ 0.42
CPSF7-205ENST00000439958 USP17L8P0C7I0 530 aa17.67■□□□□ 0.42
CPSF7-205ENST00000439958 FAM47AQ5JRC9 791 aa17.67■□□□□ 0.42
CPSF7-205ENST00000439958 MTMR6Q9Y217 621 aa17.67■□□□□ 0.42
CPSF7-205ENST00000439958 ATP6V0A2Q9Y487 856 aa17.67■□□□□ 0.42
CPSF7-205ENST00000439958 ATP6V1DQ9Y5K8 247 aa17.67■□□□□ 0.42
CPSF7-205ENST00000439958 POLR3DP05423 398 aaPredicted RBP17.67■□□□□ 0.42
CPSF7-205ENST00000439958 PHKBQ93100 1093 aa17.67■□□□□ 0.42
CPSF7-205ENST00000439958 RIOK1Q9BRS2 568 aaKnown RBP17.67■□□□□ 0.42
CPSF7-205ENST00000439958 GJB4Q9NTQ9 266 aa17.67■□□□□ 0.42
CPSF7-205ENST00000439958 UBR3Q6ZT12 1888 aa17.66■□□□□ 0.42
CPSF7-205ENST00000439958 LRP5O75197 1615 aa17.66■□□□□ 0.42
CPSF7-205ENST00000439958 TICAM2Q86XR7 235 aa17.66■□□□□ 0.42
CPSF7-205ENST00000439958 SH3RF3Q8TEJ3 882 aaPredicted RBP17.66■□□□□ 0.42
CPSF7-205ENST00000439958 TDRD7Q8NHU6 1098 aaKnown RBP17.66■□□□□ 0.42
CPSF7-205ENST00000439958 GOLGA8AA7E2F4 631 aa17.65■□□□□ 0.42
CPSF7-205ENST00000439958 C21orf2O43822 256 aa17.65■□□□□ 0.42
CPSF7-205ENST00000439958 BAG3O95817 575 aa17.65■□□□□ 0.42
CPSF7-205ENST00000439958 GNL2Q13823 731 aaKnown RBP17.65■□□□□ 0.42
CPSF7-205ENST00000439958 KRT23Q9C075 422 aa17.65■□□□□ 0.42
CPSF7-205ENST00000439958 ORC3Q9UBD5 711 aaPredicted RBP17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms