RNA–Protein interactions for RNA: ENST00000439476.6

BDNF-211, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-211ENST00000439476 ECM2O94769 699 aaPredicted RBP7.2□□□□□ -1.26
BDNF-211ENST00000439476 CYLC1P35663 651 aaPredicted RBP7.2□□□□□ -1.26
BDNF-211ENST00000439476 EVCP57679 992 aa7.2□□□□□ -1.26
BDNF-211ENST00000439476 IFFO1Q0D2I5 559 aa7.2□□□□□ -1.26
BDNF-211ENST00000439476 INF2Q27J81 1249 aa7.2□□□□□ -1.26
BDNF-211ENST00000439476 AKAP4Q5JQC9 854 aa7.2□□□□□ -1.26
BDNF-211ENST00000439476 PPP4R3AQ6IN85 833 aa7.2□□□□□ -1.26
BDNF-211ENST00000439476 CCDC129Q6ZRS4 1044 aa7.2□□□□□ -1.26
BDNF-211ENST00000439476 HOOK3Q86VS8 718 aa7.2□□□□□ -1.26
BDNF-211ENST00000439476 LRRC8AQ8IWT6 810 aa7.2□□□□□ -1.26
BDNF-211ENST00000439476 ZNF710Q8N1W2 664 aa7.2□□□□□ -1.26
BDNF-211ENST00000439476 NUP88Q99567 741 aaPredicted RBP7.2□□□□□ -1.26
BDNF-211ENST00000439476 ALG1Q9BT22 464 aa7.2□□□□□ -1.26
BDNF-211ENST00000439476 A6NNZ2 444 aa7.2□□□□□ -1.26
BDNF-211ENST00000439476 PPP1R2P41236 205 aa7.2□□□□□ -1.26
BDNF-211ENST00000439476 TUBB8Q3ZCM7 444 aa7.2□□□□□ -1.26
BDNF-211ENST00000439476 KCNV2Q8TDN2 545 aa7.2□□□□□ -1.26
BDNF-211ENST00000439476 CACTINQ8WUQ7 758 aaKnown RBP7.2□□□□□ -1.26
BDNF-211ENST00000439476 LLPHQ9BRT6 129 aaKnown RBP7.2□□□□□ -1.26
BDNF-211ENST00000439476 IMPACTQ9P2X3 320 aa7.2□□□□□ -1.26
BDNF-211ENST00000439476 AATKQ6ZMQ8 1374 aa7.2□□□□□ -1.26
BDNF-211ENST00000439476 DCAF8L1A6NGE4 600 aa7.2□□□□□ -1.26
BDNF-211ENST00000439476 IFIT3O14879 490 aaKnown RBP7.2□□□□□ -1.26
BDNF-211ENST00000439476 LARGE1O95461 756 aa7.2□□□□□ -1.26
BDNF-211ENST00000439476 NF2P35240 595 aa7.2□□□□□ -1.26
BDNF-211ENST00000439476 MECOMQ03112 1051 aa7.2□□□□□ -1.26
BDNF-211ENST00000439476 TFCP2Q12800 502 aa7.2□□□□□ -1.26
BDNF-211ENST00000439476 LMBR1LQ6UX01 489 aa7.2□□□□□ -1.26
BDNF-211ENST00000439476 USP37Q86T82 979 aa7.2□□□□□ -1.26
BDNF-211ENST00000439476 CEP112Q8N8E3 955 aa7.2□□□□□ -1.26
BDNF-211ENST00000439476 TDRD7Q8NHU6 1098 aaKnown RBP7.2□□□□□ -1.26
BDNF-211ENST00000439476 KLHDC4Q8TBB5 520 aa7.2□□□□□ -1.26
BDNF-211ENST00000439476 GOLGA1Q92805 767 aa7.2□□□□□ -1.26
BDNF-211ENST00000439476 CUL5Q93034 780 aa7.2□□□□□ -1.26
BDNF-211ENST00000439476 KRT23Q9C075 422 aa7.2□□□□□ -1.26
BDNF-211ENST00000439476 STMN4Q9H169 189 aaPredicted RBP7.2□□□□□ -1.26
BDNF-211ENST00000439476 MKNK2Q9HBH9 465 aa7.2□□□□□ -1.26
BDNF-211ENST00000439476 NCOA5Q9HCD5 579 aaKnown RBP7.2□□□□□ -1.26
BDNF-211ENST00000439476 ANKRD62A6NC57 917 aa7.19□□□□□ -1.26
BDNF-211ENST00000439476 HOXC9P31274 260 aa7.19□□□□□ -1.26
BDNF-211ENST00000439476 ERCC6LQ2NKX8 1250 aa7.19□□□□□ -1.26
BDNF-211ENST00000439476 NAIF1Q69YI7 327 aaPredicted RBP7.19□□□□□ -1.26
BDNF-211ENST00000439476 MRFAP1L1Q96HT8 127 aa7.19□□□□□ -1.26
BDNF-211ENST00000439476 CARD6Q9BX69 1037 aa7.19□□□□□ -1.26
BDNF-211ENST00000439476 PAG1Q9NWQ8 432 aa7.19□□□□□ -1.26
BDNF-211ENST00000439476 IQSEC2Q5JU85 1478 aa7.19□□□□□ -1.26
BDNF-211ENST00000439476 KLHL33A6NCF5 533 aa7.19□□□□□ -1.26
BDNF-211ENST00000439476 TRIM66O15016 1216 aa7.19□□□□□ -1.26
BDNF-211ENST00000439476 PRC1O43663 620 aa7.19□□□□□ -1.26
BDNF-211ENST00000439476 MYL5Q02045 173 aa7.19□□□□□ -1.26
BDNF-211ENST00000439476 SLC39A6Q13433 755 aa7.19□□□□□ -1.26
BDNF-211ENST00000439476 ZSCAN26Q16670 478 aa7.19□□□□□ -1.26
BDNF-211ENST00000439476 C1QTNF12Q5T7M4 302 aa7.19□□□□□ -1.26
BDNF-211ENST00000439476 ELP1O95163 1332 aa7.19□□□□□ -1.26
BDNF-211ENST00000439476 SBNO1A3KN83 1393 aa7.19□□□□□ -1.26
BDNF-211ENST00000439476 HOXB7P09629 217 aa7.19□□□□□ -1.26
BDNF-211ENST00000439476 PIP4K2BP78356 416 aa7.19□□□□□ -1.26
BDNF-211ENST00000439476 FANCCQ00597 558 aa7.19□□□□□ -1.26
BDNF-211ENST00000439476 PDE4BQ07343 736 aa7.19□□□□□ -1.26
BDNF-211ENST00000439476 KARSQ15046 597 aaKnown RBP7.19□□□□□ -1.26
BDNF-211ENST00000439476 NAA16Q6N069 864 aaPredicted RBP7.19□□□□□ -1.26
BDNF-211ENST00000439476 BRAPQ7Z569 592 aa7.19□□□□□ -1.26
BDNF-211ENST00000439476 ZNF444Q8N0Y2 327 aaPredicted RBP7.19□□□□□ -1.26
BDNF-211ENST00000439476 SLC26A6Q9BXS9 759 aa7.19□□□□□ -1.26
BDNF-211ENST00000439476 SEPT11Q9NVA2 429 aaKnown RBP7.19□□□□□ -1.26
BDNF-211ENST00000439476 A0A0D9SFI3 127 aa7.19□□□□□ -1.26
BDNF-211ENST00000439476 CCDC189A1A4V9 331 aa7.19□□□□□ -1.26
BDNF-211ENST00000439476 OPA1O60313 960 aa7.19□□□□□ -1.26
BDNF-211ENST00000439476 UBA7P41226 1012 aa7.19□□□□□ -1.26
BDNF-211ENST00000439476 ATP2B2Q01814 1243 aa7.19□□□□□ -1.26
BDNF-211ENST00000439476 SPHKAPQ2M3C7 1700 aa7.19□□□□□ -1.26
BDNF-211ENST00000439476 TMEM67Q5HYA8 995 aa7.19□□□□□ -1.26
BDNF-211ENST00000439476 CDC5LQ99459 802 aaKnown RBP7.19□□□□□ -1.26
BDNF-211ENST00000439476 XPO4Q9C0E2 1151 aaKnown RBP7.19□□□□□ -1.26
BDNF-211ENST00000439476 CDC42BPBQ9Y5S2 1711 aa7.18□□□□□ -1.26
BDNF-211ENST00000439476 MED14O60244 1454 aa7.18□□□□□ -1.26
BDNF-211ENST00000439476 ADRA2BP18089 450 aa7.18□□□□□ -1.26
BDNF-211ENST00000439476 USP5P45974 858 aa7.18□□□□□ -1.26
BDNF-211ENST00000439476 MTIF2P46199 727 aaKnown RBP7.18□□□□□ -1.26
BDNF-211ENST00000439476 RHBDL3P58872 404 aa7.18□□□□□ -1.26
BDNF-211ENST00000439476 ARMC3Q5W041 872 aa7.18□□□□□ -1.26
BDNF-211ENST00000439476 OTUD7BQ6GQQ9 843 aa7.18□□□□□ -1.26
BDNF-211ENST00000439476 ARFGAP2Q8N6H7 521 aa7.18□□□□□ -1.26
BDNF-211ENST00000439476 KLHL23Q8NBE8 558 aa7.18□□□□□ -1.26
BDNF-211ENST00000439476 IL17REQ8NFR9 667 aa7.18□□□□□ -1.26
BDNF-211ENST00000439476 FERMT1Q9BQL6 677 aa7.18□□□□□ -1.26
BDNF-211ENST00000439476 NSRP1Q9H0G5 558 aaKnown RBP7.18□□□□□ -1.26
BDNF-211ENST00000439476 LGR6Q9HBX8 967 aa7.18□□□□□ -1.26
BDNF-211ENST00000439476 SPTLC3Q9NUV7 552 aa7.18□□□□□ -1.26
BDNF-211ENST00000439476 TMOD3Q9NYL9 352 aa7.18□□□□□ -1.26
BDNF-211ENST00000439476 NLRP5P59047 1200 aa7.18□□□□□ -1.26
BDNF-211ENST00000439476 RPUSD2Q8IZ73 545 aaKnown RBP7.18□□□□□ -1.26
BDNF-211ENST00000439476 PAF1Q8N7H5 531 aa7.18□□□□□ -1.26
BDNF-211ENST00000439476 LRRC59Q96AG4 307 aaKnown RBP7.18□□□□□ -1.26
BDNF-211ENST00000439476 EAF2Q96CJ1 260 aaPredicted RBP7.18□□□□□ -1.26
BDNF-211ENST00000439476 EDC3Q96F86 508 aaKnown RBP7.18□□□□□ -1.26
BDNF-211ENST00000439476 SUCLG2Q96I99 432 aa7.18□□□□□ -1.26
BDNF-211ENST00000439476 USP28Q96RU2 1077 aa7.18□□□□□ -1.26
BDNF-211ENST00000439476 BAG1Q99933 345 aaPredicted RBP7.18□□□□□ -1.26
BDNF-211ENST00000439476 ZBTB3Q9H5J0 574 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms