RNA–Protein interactions for RNA: ENST00000439029.5

SMPD4-208, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 4

Gene SMPD4, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-208ENST00000439029 MDM2Q00987 491 aaPredicted RBP12.49□□□□□ -0.41
SMPD4-208ENST00000439029 NEXNQ0ZGT2 675 aa12.49□□□□□ -0.41
SMPD4-208ENST00000439029 GPAT2Q6NUI2 795 aa12.49□□□□□ -0.41
SMPD4-208ENST00000439029 C8orf58Q8NAV2 365 aa12.49□□□□□ -0.41
SMPD4-208ENST00000439029 PARK7Q99497 189 aaKnown RBP12.49□□□□□ -0.41
SMPD4-208ENST00000439029 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.49□□□□□ -0.411e-6■■■■■ 32
SMPD4-208ENST00000439029 IQSEC3Q9UPP2 1182 aaPredicted RBP12.49□□□□□ -0.41
SMPD4-208ENST00000439029 CHMP3Q9Y3E7 222 aa12.49□□□□□ -0.41
SMPD4-208ENST00000439029 DOCK3Q8IZD9 2030 aa12.49□□□□□ -0.41
SMPD4-208ENST00000439029 FAM205AQ6ZU69 1335 aa12.48□□□□□ -0.41
SMPD4-208ENST00000439029 CSF1RP07333 972 aa12.48□□□□□ -0.41
SMPD4-208ENST00000439029 TRIM32Q13049 653 aa12.48□□□□□ -0.41
SMPD4-208ENST00000439029 ZNF594Q96JF6 807 aaPredicted RBP12.48□□□□□ -0.41
SMPD4-208ENST00000439029 ZNF341Q9BYN7 854 aa12.48□□□□□ -0.41
SMPD4-208ENST00000439029 NBPF3Q9H094 633 aa12.48□□□□□ -0.41
SMPD4-208ENST00000439029 C11orf49Q9H6J7 331 aa12.48□□□□□ -0.41
SMPD4-208ENST00000439029 POTEB2H3BUK9 544 aa12.47□□□□□ -0.41
SMPD4-208ENST00000439029 CHAF1AQ13111 956 aaPredicted RBP12.47□□□□□ -0.41
SMPD4-208ENST00000439029 TDRD7Q8NHU6 1098 aaKnown RBP12.47□□□□□ -0.41
SMPD4-208ENST00000439029 PXYLP1Q8TE99 480 aa12.47□□□□□ -0.41
SMPD4-208ENST00000439029 PLA2G12BQ9BX93 195 aa12.47□□□□□ -0.41
SMPD4-208ENST00000439029 KCNH4Q9UQ05 1017 aa12.47□□□□□ -0.41
SMPD4-208ENST00000439029 GCKRQ14397 625 aa12.46□□□□□ -0.41
SMPD4-208ENST00000439029 DCAF15Q66K64 600 aa12.46□□□□□ -0.41
SMPD4-208ENST00000439029 G2E3Q7L622 706 aa12.46□□□□□ -0.41
SMPD4-208ENST00000439029 MAFAQ8NHW3 353 aaPredicted RBP12.46□□□□□ -0.41
SMPD4-208ENST00000439029 CDX2Q99626 313 aaPredicted RBP12.46□□□□□ -0.41
SMPD4-208ENST00000439029 TMOD2Q9NZR1 351 aa12.46□□□□□ -0.41
SMPD4-208ENST00000439029 SPTBN5Q9NRC6 3674 aaKnown RBP12.46□□□□□ -0.42
SMPD4-208ENST00000439029 CASP7P55210 303 aa12.45□□□□□ -0.42
SMPD4-208ENST00000439029 IFIT5Q13325 482 aaKnown RBP12.45□□□□□ -0.42
SMPD4-208ENST00000439029 IRF5Q13568 498 aa12.45□□□□□ -0.42
SMPD4-208ENST00000439029 CCDC30Q5VVM6 783 aa12.45□□□□□ -0.42
SMPD4-208ENST00000439029 GADL1Q6ZQY3 521 aa12.45□□□□□ -0.42
SMPD4-208ENST00000439029 TSPYL6Q8N831 410 aa12.45□□□□□ -0.42
SMPD4-208ENST00000439029 A0A1B0GUL6 1792 aa12.45□□□□□ -0.42
SMPD4-208ENST00000439029 DDX60LQ5H9U9 1706 aaKnown RBP12.45□□□□□ -0.42
SMPD4-208ENST00000439029 ZNF853P0CG23 659 aa12.44□□□□□ -0.42
SMPD4-208ENST00000439029 HIBADHP31937 336 aaKnown RBP12.44□□□□□ -0.42
SMPD4-208ENST00000439029 TCP10Q12799 353 aa12.44□□□□□ -0.42
SMPD4-208ENST00000439029 ZNF697Q5TEC3 545 aa12.44□□□□□ -0.42
SMPD4-208ENST00000439029 ANKLE1Q8NAG6 615 aa12.44□□□□□ -0.42
SMPD4-208ENST00000439029 TEKT1Q969V4 418 aa12.44□□□□□ -0.42
SMPD4-208ENST00000439029 RUNDC1Q96C34 613 aa12.44□□□□□ -0.42
SMPD4-208ENST00000439029 FAM84BQ96KN1 310 aaPredicted RBP12.44□□□□□ -0.42
SMPD4-208ENST00000439029 CNNM1Q9NRU3 951 aa12.44□□□□□ -0.42
SMPD4-208ENST00000439029 PFASO15067 1338 aa12.43□□□□□ -0.42
SMPD4-208ENST00000439029 FAM109BQ6ICB4 259 aaPredicted RBP12.43□□□□□ -0.42
SMPD4-208ENST00000439029 APOBEC3HQ6NTF7 200 aaKnown RBP12.43□□□□□ -0.42
SMPD4-208ENST00000439029 FAM83AQ86UY5 434 aa12.43□□□□□ -0.42
SMPD4-208ENST00000439029 ANKRD13CQ8N6S4 541 aa12.43□□□□□ -0.42
SMPD4-208ENST00000439029 SMCR8Q8TEV9 937 aaPredicted RBP12.43□□□□□ -0.42
SMPD4-208ENST00000439029 MYLIPQ8WY64 445 aa12.43□□□□□ -0.42
SMPD4-208ENST00000439029 COA7Q96BR5 231 aa12.43□□□□□ -0.42
SMPD4-208ENST00000439029 HOOK2Q96ED9 719 aa12.43□□□□□ -0.42
SMPD4-208ENST00000439029 AK9Q5TCS8 1911 aa12.43□□□□□ -0.42
SMPD4-208ENST00000439029 CAPN2P17655 700 aa12.42□□□□□ -0.42
SMPD4-208ENST00000439029 FOXO4P98177 505 aa12.42□□□□□ -0.42
SMPD4-208ENST00000439029 TAF7LQ5H9L4 462 aa12.42□□□□□ -0.42
SMPD4-208ENST00000439029 LDHAL6AQ6ZMR3 332 aa12.42□□□□□ -0.42
SMPD4-208ENST00000439029 HMX1Q9NP08 348 aaPredicted RBP12.42□□□□□ -0.42
SMPD4-208ENST00000439029 ZNF112Q9UJU3 913 aa12.42□□□□□ -0.42
SMPD4-208ENST00000439029 ZHX2Q9Y6X8 837 aa12.42□□□□□ -0.42
SMPD4-208ENST00000439029 CXCL11O14625 94 aa12.41□□□□□ -0.42
SMPD4-208ENST00000439029 HMGCRP04035 888 aa12.41□□□□□ -0.42
SMPD4-208ENST00000439029 LRRC26Q2I0M4 334 aa12.41□□□□□ -0.42
SMPD4-208ENST00000439029 EPHA10Q5JZY3 1008 aa12.41□□□□□ -0.42
SMPD4-208ENST00000439029 LMBR1LQ6UX01 489 aa12.41□□□□□ -0.42
SMPD4-208ENST00000439029 ZDHHC15Q96MV8 337 aa12.41□□□□□ -0.42
SMPD4-208ENST00000439029 IFT57Q9NWB7 429 aa12.41□□□□□ -0.42
SMPD4-208ENST00000439029 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.41□□□□□ -0.42
SMPD4-208ENST00000439029 A0A0G2JLL6 359 aaPredicted RBP12.4□□□□□ -0.42
SMPD4-208ENST00000439029 FRAT2O75474 233 aaPredicted RBP12.4□□□□□ -0.42
SMPD4-208ENST00000439029 SLURP2P0DP57 97 aa12.4□□□□□ -0.42
SMPD4-208ENST00000439029 GNAI1P63096 354 aa12.4□□□□□ -0.42
SMPD4-208ENST00000439029 NFIAQ12857 509 aa12.4□□□□□ -0.42
SMPD4-208ENST00000439029 NOL9Q5SY16 702 aaKnown RBP12.4□□□□□ -0.42
SMPD4-208ENST00000439029 PRRT2Q7Z6L0 340 aaPredicted RBP12.4□□□□□ -0.42
SMPD4-208ENST00000439029 CCDC84Q86UT8 332 aaPredicted RBP12.4□□□□□ -0.42
SMPD4-208ENST00000439029 VPS37DQ86XT2 251 aa12.4□□□□□ -0.42
SMPD4-208ENST00000439029 PUS3Q9BZE2 481 aaKnown RBP12.4□□□□□ -0.42
SMPD4-208ENST00000439029 SEMA6BQ9H3T3 888 aa12.4□□□□□ -0.42
SMPD4-208ENST00000439029 OGDHLQ9ULD0 1010 aa12.4□□□□□ -0.42
SMPD4-208ENST00000439029 TMEM265A0A087WTH1 108 aa12.39□□□□□ -0.43
SMPD4-208ENST00000439029 HDLBPQ00341 1268 aaKnown RBP12.39□□□□□ -0.43
SMPD4-208ENST00000439029 CCDC57Q2TAC2 916 aa12.39□□□□□ -0.43
SMPD4-208ENST00000439029 FASTKD5Q7L8L6 764 aaKnown RBP12.39□□□□□ -0.43
SMPD4-208ENST00000439029 ZFPM1Q8IX07 1006 aa12.39□□□□□ -0.43
SMPD4-208ENST00000439029 FAM151AQ8WW52 585 aa12.39□□□□□ -0.43
SMPD4-208ENST00000439029 LBHD1Q9BQE6 289 aaPredicted RBP12.39□□□□□ -0.43
SMPD4-208ENST00000439029 STK31Q9BXU1 1019 aa12.39□□□□□ -0.43
SMPD4-208ENST00000439029 MYH16Q9H6N6 1097 aa12.39□□□□□ -0.43
SMPD4-208ENST00000439029 EYSQ5T1H1 3165 aa12.38□□□□□ -0.43
SMPD4-208ENST00000439029 TRIM75PA6NK02 468 aa12.38□□□□□ -0.43
SMPD4-208ENST00000439029 TNFRSF10AO00220 468 aa12.38□□□□□ -0.43
SMPD4-208ENST00000439029 SLC4A2P04920 1241 aa12.38□□□□□ -0.43
SMPD4-208ENST00000439029 FOSL2P15408 326 aa12.38□□□□□ -0.43
SMPD4-208ENST00000439029 PLA2G5P39877 138 aa12.38□□□□□ -0.43
SMPD4-208ENST00000439029 UBE4AQ14139 1066 aa12.38□□□□□ -0.43
SMPD4-208ENST00000439029 WDR43Q15061 677 aaKnown RBP eCLIP12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms