RNA–Protein interactions for RNA: ENST00000439027.1

AC011228.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC011228.1, Length 757 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC011228.1-201ENST00000439027 SMC4Q9NTJ3 1288 aa11.48□□□□□ -0.57
AC011228.1-201ENST00000439027 A0A1B0GUL6 1792 aa11.47□□□□□ -0.57
AC011228.1-201ENST00000439027 SSC5DA1L4H1 1573 aa11.47□□□□□ -0.57
AC011228.1-201ENST00000439027 UNCXA6NJT0 531 aa11.47□□□□□ -0.57
AC011228.1-201ENST00000439027 IFIT1P09914 478 aaKnown RBP11.47□□□□□ -0.57
AC011228.1-201ENST00000439027 NOM1Q5C9Z4 860 aaKnown RBP11.47□□□□□ -0.57
AC011228.1-201ENST00000439027 OTUD7BQ6GQQ9 843 aa11.47□□□□□ -0.57
AC011228.1-201ENST00000439027 ANKRD13AQ8IZ07 590 aa11.47□□□□□ -0.57
AC011228.1-201ENST00000439027 TMEM39BQ9GZU3 492 aa11.47□□□□□ -0.57
AC011228.1-201ENST00000439027 IGF2BP3O00425 579 aaKnown RBP eCLIP11.46□□□□□ -0.57
AC011228.1-201ENST00000439027 BCAR3O75815 825 aa11.46□□□□□ -0.57
AC011228.1-201ENST00000439027 GJA5P36382 358 aa11.46□□□□□ -0.57
AC011228.1-201ENST00000439027 CACNB3P54284 484 aa11.46□□□□□ -0.57
AC011228.1-201ENST00000439027 PUM3Q15397 648 aaKnown RBP11.46□□□□□ -0.57
AC011228.1-201ENST00000439027 ALDH1L2Q3SY69 923 aa11.46□□□□□ -0.57
AC011228.1-201ENST00000439027 FBXO46Q6PJ61 603 aaPredicted RBP11.46□□□□□ -0.57
AC011228.1-201ENST00000439027 CDAN1Q8IWY9 1227 aa11.46□□□□□ -0.57
AC011228.1-201ENST00000439027 TEKT1Q969V4 418 aa11.46□□□□□ -0.57
AC011228.1-201ENST00000439027 CFHR5Q9BXR6 569 aa11.46□□□□□ -0.57
AC011228.1-201ENST00000439027 TMOD2Q9NZR1 351 aa11.46□□□□□ -0.57
AC011228.1-201ENST00000439027 EYA2O00167 538 aa11.45□□□□□ -0.58
AC011228.1-201ENST00000439027 SLC5A1P13866 664 aa11.45□□□□□ -0.58
AC011228.1-201ENST00000439027 MAP3K9P80192 1104 aa11.45□□□□□ -0.58
AC011228.1-201ENST00000439027 HDLBPQ00341 1268 aaKnown RBP11.45□□□□□ -0.58
AC011228.1-201ENST00000439027 VGLL2Q8N8G2 317 aa11.45□□□□□ -0.58
AC011228.1-201ENST00000439027 OPTNQ96CV9 577 aa11.45□□□□□ -0.58
AC011228.1-201ENST00000439027 TEPSINQ96N21 525 aa11.45□□□□□ -0.58
AC011228.1-201ENST00000439027 TRIM17Q9Y577 477 aa11.45□□□□□ -0.58
AC011228.1-201ENST00000439027 UBTFL1P0CB47 393 aaPredicted RBP11.44□□□□□ -0.58
AC011228.1-201ENST00000439027 IRX5P78411 483 aaPredicted RBP11.44□□□□□ -0.58
AC011228.1-201ENST00000439027 SIL1Q9H173 461 aa11.44□□□□□ -0.58
AC011228.1-201ENST00000439027 NOB1Q9ULX3 412 aaKnown RBP11.44□□□□□ -0.58
AC011228.1-201ENST00000439027 CSADQ9Y600 493 aa11.44□□□□□ -0.58
AC011228.1-201ENST00000439027 KIAA0100Q14667 2235 aaKnown RBP11.44□□□□□ -0.58
AC011228.1-201ENST00000439027 ECM29Q5VYK3 1845 aa11.44□□□□□ -0.58
AC011228.1-201ENST00000439027 TNRC18O15417 2968 aaPredicted RBP11.43□□□□□ -0.58
AC011228.1-201ENST00000439027 MAST3O60307 1309 aa11.43□□□□□ -0.58
AC011228.1-201ENST00000439027 PLCG2P16885 1265 aa11.43□□□□□ -0.58
AC011228.1-201ENST00000439027 FGFR2P21802 821 aa11.43□□□□□ -0.58
AC011228.1-201ENST00000439027 RFX5P48382 616 aaPredicted RBP11.43□□□□□ -0.58
AC011228.1-201ENST00000439027 RRP1P56182 461 aaKnown RBP11.43□□□□□ -0.58
AC011228.1-201ENST00000439027 CRHR2Q13324 411 aa11.43□□□□□ -0.58
AC011228.1-201ENST00000439027 MAMSTRQ6ZN01 415 aa11.43□□□□□ -0.58
AC011228.1-201ENST00000439027 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.43□□□□□ -0.58
AC011228.1-201ENST00000439027 CD99L2Q8TCZ2 262 aa11.43□□□□□ -0.58
AC011228.1-201ENST00000439027 LPIN2Q92539 896 aa11.43□□□□□ -0.58
AC011228.1-201ENST00000439027 ERO1AQ96HE7 468 aa11.43□□□□□ -0.58
AC011228.1-201ENST00000439027 ZDHHC15Q96MV8 337 aa11.43□□□□□ -0.58
AC011228.1-201ENST00000439027 PTPN18Q99952 460 aa11.43□□□□□ -0.58
AC011228.1-201ENST00000439027 CEP126Q9P2H0 1117 aa11.43□□□□□ -0.58
AC011228.1-201ENST00000439027 CCL15-CCL14A0A0B4J2E2 113 aa11.42□□□□□ -0.58
AC011228.1-201ENST00000439027 SLC34A2O95436 690 aa11.42□□□□□ -0.58
AC011228.1-201ENST00000439027 VGLL4Q14135 290 aa11.42□□□□□ -0.58
AC011228.1-201ENST00000439027 CCL15Q16663 113 aa11.42□□□□□ -0.58
AC011228.1-201ENST00000439027 ATP2B3Q16720 1220 aa11.42□□□□□ -0.58
AC011228.1-201ENST00000439027 APOBEC3HQ6NTF7 200 aaKnown RBP11.42□□□□□ -0.58
AC011228.1-201ENST00000439027 OTOP1Q7RTM1 612 aa11.42□□□□□ -0.58
AC011228.1-201ENST00000439027 ATG9AQ7Z3C6 839 aa11.42□□□□□ -0.58
AC011228.1-201ENST00000439027 WDR66Q8TBY9 1149 aa11.42□□□□□ -0.58
AC011228.1-201ENST00000439027 FRAT1Q92837 279 aaPredicted RBP11.42□□□□□ -0.58
AC011228.1-201ENST00000439027 MRIQ9BWK5 157 aa11.42□□□□□ -0.58
AC011228.1-201ENST00000439027 API5Q9BZZ5 524 aaKnown RBP11.42□□□□□ -0.58
AC011228.1-201ENST00000439027 GNL3LQ9NVN8 582 aaKnown RBP11.42□□□□□ -0.58
AC011228.1-201ENST00000439027 SUGT1Q9Y2Z0 365 aa11.42□□□□□ -0.58
AC011228.1-201ENST00000439027 KIF16BQ96L93 1317 aa11.41□□□□□ -0.58
AC011228.1-201ENST00000439027 TESPA1A2RU30 521 aaPredicted RBP11.41□□□□□ -0.58
AC011228.1-201ENST00000439027 GTF2A2P52657 109 aa11.41□□□□□ -0.58
AC011228.1-201ENST00000439027 IRX6P78412 446 aaPredicted RBP11.41□□□□□ -0.58
AC011228.1-201ENST00000439027 SP3Q02447 781 aa11.41□□□□□ -0.58
AC011228.1-201ENST00000439027 TAF1CQ15572 869 aaPredicted RBP11.41□□□□□ -0.58
AC011228.1-201ENST00000439027 HHIPL2Q6UWX4 724 aa11.41□□□□□ -0.58
AC011228.1-201ENST00000439027 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.41□□□□□ -0.58
AC011228.1-201ENST00000439027 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.41□□□□□ -0.58
AC011228.1-201ENST00000439027 BRI3BPQ8WY22 251 aa11.41□□□□□ -0.58
AC011228.1-201ENST00000439027 RNF25Q96BH1 459 aaPredicted RBP11.41□□□□□ -0.58
AC011228.1-201ENST00000439027 HOOK2Q96ED9 719 aa11.41□□□□□ -0.58
AC011228.1-201ENST00000439027 WRNIP1Q96S55 665 aa11.41□□□□□ -0.58
AC011228.1-201ENST00000439027 EFCC1Q9HA90 598 aa11.41□□□□□ -0.58
AC011228.1-201ENST00000439027 HDAC5Q9UQL6 1122 aa11.41□□□□□ -0.58
AC011228.1-201ENST00000439027 LRRFIP2Q9Y608 721 aaKnown RBP11.41□□□□□ -0.58
AC011228.1-201ENST00000439027 WDHD1O75717 1129 aaPredicted RBP11.4□□□□□ -0.58
AC011228.1-201ENST00000439027 CIAO1O76071 339 aa11.4□□□□□ -0.58
AC011228.1-201ENST00000439027 NEFLP07196 543 aa11.4□□□□□ -0.58
AC011228.1-201ENST00000439027 FKBP1CQ5VVH2 108 aa11.4□□□□□ -0.58
AC011228.1-201ENST00000439027 DCAF15Q66K64 600 aa11.4□□□□□ -0.58
AC011228.1-201ENST00000439027 MIGA2Q7L4E1 593 aa11.4□□□□□ -0.58
AC011228.1-201ENST00000439027 FAM83AQ86UY5 434 aa11.4□□□□□ -0.58
AC011228.1-201ENST00000439027 ZKSCAN4Q969J2 545 aaPredicted RBP11.4□□□□□ -0.58
AC011228.1-201ENST00000439027 MS4A4AQ96JQ5 239 aa11.4□□□□□ -0.58
AC011228.1-201ENST00000439027 OCEL1Q9H607 264 aa11.4□□□□□ -0.58
AC011228.1-201ENST00000439027 ZFYVE28Q9HCC9 887 aa11.4□□□□□ -0.58
AC011228.1-201ENST00000439027 PA2G4Q9UQ80 394 aaKnown RBP11.4□□□□□ -0.58
AC011228.1-201ENST00000439027 RIOK3O14730 519 aaKnown RBP11.39□□□□□ -0.59
AC011228.1-201ENST00000439027 LDHBP07195 334 aaKnown RBP11.39□□□□□ -0.59
AC011228.1-201ENST00000439027 IL15P40933 162 aaPredicted RBP11.39□□□□□ -0.59
AC011228.1-201ENST00000439027 TCP10Q12799 353 aa11.39□□□□□ -0.59
AC011228.1-201ENST00000439027 ARHGEF6Q15052 776 aa11.39□□□□□ -0.59
AC011228.1-201ENST00000439027 DIXDC1Q155Q3 683 aa11.39□□□□□ -0.59
AC011228.1-201ENST00000439027 ERO1BQ86YB8 467 aa11.39□□□□□ -0.59
AC011228.1-201ENST00000439027 ZNF341Q9BYN7 854 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms