RNA–Protein interactions for RNA: ENST00000438055.5

TTC3-209, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 3,606 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-209ENST00000438055 NKX1-1Q15270 411 aaPredicted RBP19.35■□□□□ 0.69
TTC3-209ENST00000438055 PTPN21Q16825 1174 aa19.35■□□□□ 0.69
TTC3-209ENST00000438055 SARM1Q6SZW1 724 aa19.35■□□□□ 0.69
TTC3-209ENST00000438055 PDILTQ8N807 584 aa19.35■□□□□ 0.69
TTC3-209ENST00000438055 CNNM3Q8NE01 707 aa19.35■□□□□ 0.69
TTC3-209ENST00000438055 PAXBP1Q9Y5B6 917 aa19.35■□□□□ 0.69
TTC3-209ENST00000438055 PDE8AO60658 829 aa19.34■□□□□ 0.69
TTC3-209ENST00000438055 CSF1RP07333 972 aa19.34■□□□□ 0.69
TTC3-209ENST00000438055 TRIM28Q13263 835 aaKnown RBP19.34■□□□□ 0.69
TTC3-209ENST00000438055 MFSD6Q6ZSS7 791 aa19.34■□□□□ 0.69
TTC3-209ENST00000438055 TRIM22Q8IYM9 498 aa19.34■□□□□ 0.69
TTC3-209ENST00000438055 CDC27P30260 824 aa19.34■□□□□ 0.69
TTC3-209ENST00000438055 GTF2F1P35269 517 aaKnown RBP eCLIP19.34■□□□□ 0.695e-13■■■■□ 20.3
TTC3-209ENST00000438055 NACAP1Q9BZK3 213 aa19.34■□□□□ 0.69
TTC3-209ENST00000438055 ZMYM6O95789 1325 aa19.34■□□□□ 0.69
TTC3-209ENST00000438055 KIF1AQ12756 1690 aa19.34■□□□□ 0.69
TTC3-209ENST00000438055 UBE2Q2LH0YL09 131 aa19.34■□□□□ 0.69
TTC3-209ENST00000438055 CDC25BP30305 580 aa19.34■□□□□ 0.69
TTC3-209ENST00000438055 GSDMDP57764 484 aa19.34■□□□□ 0.69
TTC3-209ENST00000438055 TRPM3Q9HCF6 1732 aaPredicted RBP19.34■□□□□ 0.69
TTC3-209ENST00000438055 EXOC5O00471 708 aa19.33■□□□□ 0.69
TTC3-209ENST00000438055 CDK11BP21127 795 aaKnown RBP19.33■□□□□ 0.69
TTC3-209ENST00000438055 PNOCQ13519 176 aa19.33■□□□□ 0.69
TTC3-209ENST00000438055 PUM3Q15397 648 aaKnown RBP19.33■□□□□ 0.69
TTC3-209ENST00000438055 AKAP17AQ02040 695 aaKnown RBP19.33■□□□□ 0.69
TTC3-209ENST00000438055 SPATA5Q8NB90 893 aa19.33■□□□□ 0.69
TTC3-209ENST00000438055 KCNJ14Q9UNX9 436 aa19.33■□□□□ 0.69
TTC3-209ENST00000438055 SLC4A4Q9Y6R1 1079 aa19.33■□□□□ 0.69
TTC3-209ENST00000438055 WDHD1O75717 1129 aaPredicted RBP19.33■□□□□ 0.68
TTC3-209ENST00000438055 ACSBG1Q96GR2 724 aa19.33■□□□□ 0.68
TTC3-209ENST00000438055 NEDD4P46934 1319 aa19.33■□□□□ 0.68
TTC3-209ENST00000438055 SH2B2O14492 632 aaPredicted RBP19.32■□□□□ 0.68
TTC3-209ENST00000438055 PRKAB2O43741 272 aa19.32■□□□□ 0.68
TTC3-209ENST00000438055 KIF18AQ8NI77 898 aa19.32■□□□□ 0.68
TTC3-209ENST00000438055 LPIN2Q92539 896 aa19.32■□□□□ 0.68
TTC3-209ENST00000438055 SEC31BQ9NQW1 1179 aa19.32■□□□□ 0.68
TTC3-209ENST00000438055 CMA1P23946 247 aa19.32■□□□□ 0.68
TTC3-209ENST00000438055 NLRP12P59046 1061 aa19.32■□□□□ 0.68
TTC3-209ENST00000438055 SLC39A14Q15043 492 aa19.32■□□□□ 0.68
TTC3-209ENST00000438055 FAM177A1Q8N128 213 aaPredicted RBP19.32■□□□□ 0.68
TTC3-209ENST00000438055 SIPA1L3O60292 1781 aaPredicted RBP19.32■□□□□ 0.68
TTC3-209ENST00000438055 UBE3CQ15386 1083 aa19.32■□□□□ 0.68
TTC3-209ENST00000438055 RAI14Q9P0K7 980 aa19.32■□□□□ 0.68
TTC3-209ENST00000438055 CAMTA1Q9Y6Y1 1673 aa19.31■□□□□ 0.68
TTC3-209ENST00000438055 TICAM2Q86XR7 235 aa19.31■□□□□ 0.68
TTC3-209ENST00000438055 IFNL3Q8IZI9 196 aa19.31■□□□□ 0.68
TTC3-209ENST00000438055 UBAC1Q9BSL1 405 aa19.31■□□□□ 0.68
TTC3-209ENST00000438055 ATP1A3P13637 1013 aa19.31■□□□□ 0.68
TTC3-209ENST00000438055 GTF2E1P29083 439 aaPredicted RBP19.31■□□□□ 0.68
TTC3-209ENST00000438055 NKX2-3Q8TAU0 364 aa19.31■□□□□ 0.68
TTC3-209ENST00000438055 IGHMBP2P38935 993 aaKnown RBP19.31■□□□□ 0.68
TTC3-209ENST00000438055 UBASH3AP57075 661 aa19.31■□□□□ 0.68
TTC3-209ENST00000438055 TMEM87BQ96K49 555 aa19.31■□□□□ 0.68
TTC3-209ENST00000438055 ZSWIM5Q9P217 1185 aa19.31■□□□□ 0.68
TTC3-209ENST00000438055 BCAMP50895 628 aa19.3■□□□□ 0.68
TTC3-209ENST00000438055 WTAPQ15007 396 aa19.3■□□□□ 0.68
TTC3-209ENST00000438055 PKNOX2Q96KN3 472 aa19.3■□□□□ 0.68
TTC3-209ENST00000438055 STRBPQ96SI9 672 aaKnown RBP19.3■□□□□ 0.68
TTC3-209ENST00000438055 BTBD18B2RXH4 712 aa19.3■□□□□ 0.68
TTC3-209ENST00000438055 EVCP57679 992 aa19.3■□□□□ 0.68
TTC3-209ENST00000438055 FANCCQ00597 558 aa19.3■□□□□ 0.68
TTC3-209ENST00000438055 PLA2G12BQ9BX93 195 aa19.3■□□□□ 0.68
TTC3-209ENST00000438055 RASGRF1Q13972 1273 aa19.3■□□□□ 0.68
TTC3-209ENST00000438055 RTN1Q16799 776 aa19.3■□□□□ 0.68
TTC3-209ENST00000438055 ARFGEF2Q9Y6D5 1785 aa19.29■□□□□ 0.68
TTC3-209ENST00000438055 MROH7-TTC4A0A0A0MT08 1334 aa19.29■□□□□ 0.68
TTC3-209ENST00000438055 ZNF335Q9H4Z2 1342 aaPredicted RBP19.29■□□□□ 0.68
TTC3-209ENST00000438055 IGSF3O75054 1194 aa19.29■□□□□ 0.68
TTC3-209ENST00000438055 CYP19A1P11511 503 aaPredicted RBP19.29■□□□□ 0.68
TTC3-209ENST00000438055 NCBP1Q09161 790 aaKnown RBP19.29■□□□□ 0.68
TTC3-209ENST00000438055 DIS3L2Q8IYB7 885 aaKnown RBP19.29■□□□□ 0.68
TTC3-209ENST00000438055 NBPF3Q9H094 633 aa19.29■□□□□ 0.68
TTC3-209ENST00000438055 ZNF215Q9UL58 517 aaPredicted RBP19.29■□□□□ 0.68
TTC3-209ENST00000438055 KCNH3Q9ULD8 1083 aa19.29■□□□□ 0.68
TTC3-209ENST00000438055 PATL2C9JE40 543 aaKnown RBP19.28■□□□□ 0.68
TTC3-209ENST00000438055 AXDND1Q5T1B0 1012 aaPredicted RBP19.28■□□□□ 0.68
TTC3-209ENST00000438055 CREBRFQ8IUR6 639 aa19.28■□□□□ 0.68
TTC3-209ENST00000438055 CCAR2Q8N163 923 aaKnown RBP19.28■□□□□ 0.68
TTC3-209ENST00000438055 COL5A2P05997 1499 aaPredicted RBP19.28■□□□□ 0.68
TTC3-209ENST00000438055 hCG_1642624A0A1W2PR95 340 aa19.28■□□□□ 0.68
TTC3-209ENST00000438055 SYT10Q6XYQ8 523 aa19.28■□□□□ 0.68
TTC3-209ENST00000438055 HOOK1Q9UJC3 728 aaKnown RBP19.28■□□□□ 0.68
TTC3-209ENST00000438055 CYP7A1P22680 504 aa19.27■□□□□ 0.68
TTC3-209ENST00000438055 BICDL1Q6ZP65 573 aa19.27■□□□□ 0.68
TTC3-209ENST00000438055 CCDC150Q8NCX0 1101 aa19.27■□□□□ 0.68
TTC3-209ENST00000438055 ZNF142P52746 1687 aaPredicted RBP19.27■□□□□ 0.68
TTC3-209ENST00000438055 CCZ1BP86790 482 aa19.27■□□□□ 0.68
TTC3-209ENST00000438055 CCZ1P86791 482 aaPredicted RBP19.27■□□□□ 0.68
TTC3-209ENST00000438055 GOLGA8FQ08AF8 430 aa19.27■□□□□ 0.68
TTC3-209ENST00000438055 GOLGA8DPQ0D2H9 430 aa19.27■□□□□ 0.68
TTC3-209ENST00000438055 AKNAD1Q5T1N1 836 aa19.27■□□□□ 0.68
TTC3-209ENST00000438055 WASF1Q92558 559 aa19.27■□□□□ 0.68
TTC3-209ENST00000438055 KRT23Q9C075 422 aa19.27■□□□□ 0.67
TTC3-209ENST00000438055 NIP7Q9Y221 180 aaKnown RBP eCLIP19.27■□□□□ 0.67
TTC3-209ENST00000438055 TOP1P11387 765 aaKnown RBP19.26■□□□□ 0.67
TTC3-209ENST00000438055 ATP6V1AP38606 617 aa19.26■□□□□ 0.67
TTC3-209ENST00000438055 MYL5Q02045 173 aa19.26■□□□□ 0.67
TTC3-209ENST00000438055 SHC4Q6S5L8 630 aa19.26■□□□□ 0.67
TTC3-209ENST00000438055 CDHR2Q9BYE9 1310 aa19.26■□□□□ 0.67
TTC3-209ENST00000438055 LMTK3Q96Q04 1460 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms