RNA–Protein interactions for RNA: ENST00000437003.3

TMEM116-202, Transcript of transmembrane protein 116, humanhuman

Gene TMEM116, Length 2,761 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-202ENST00000437003 PARP3Q9Y6F1 533 aa14.26□□□□□ -0.13
TMEM116-202ENST00000437003 PALLDQ8WX93 1383 aa14.26□□□□□ -0.13
TMEM116-202ENST00000437003 M0R2C6 588 aa14.26□□□□□ -0.13
TMEM116-202ENST00000437003 IL2RBP14784 551 aa14.26□□□□□ -0.13
TMEM116-202ENST00000437003 FANCCQ00597 558 aa14.26□□□□□ -0.13
TMEM116-202ENST00000437003 CC2D1AQ6P1N0 951 aaPredicted RBP14.26□□□□□ -0.13
TMEM116-202ENST00000437003 EFCAB8A8MWE9 144 aa14.25□□□□□ -0.13
TMEM116-202ENST00000437003 MYO1CO00159 1063 aa14.25□□□□□ -0.13
TMEM116-202ENST00000437003 POLR3DP05423 398 aaPredicted RBP14.25□□□□□ -0.13
TMEM116-202ENST00000437003 LRRFIP1Q32MZ4 808 aaKnown RBP14.25□□□□□ -0.13
TMEM116-202ENST00000437003 NAA16Q6N069 864 aaPredicted RBP14.25□□□□□ -0.13
TMEM116-202ENST00000437003 DPF2Q92785 391 aa14.25□□□□□ -0.13
TMEM116-202ENST00000437003 HSPA2P54652 639 aa14.25□□□□□ -0.13
TMEM116-202ENST00000437003 STK38Q15208 465 aa14.25□□□□□ -0.13
TMEM116-202ENST00000437003 ZMYM1Q5SVZ6 1142 aa14.25□□□□□ -0.13
TMEM116-202ENST00000437003 DSCC1Q9BVC3 393 aa14.25□□□□□ -0.13
TMEM116-202ENST00000437003 ZSWIM4Q9H7M6 989 aa14.25□□□□□ -0.13
TMEM116-202ENST00000437003 STRN4Q9NRL3 753 aa14.25□□□□□ -0.13
TMEM116-202ENST00000437003 SLC3A2P08195 630 aaKnown RBP14.24□□□□□ -0.13
TMEM116-202ENST00000437003 PDIA3P30101 505 aaKnown RBP14.24□□□□□ -0.13
TMEM116-202ENST00000437003 CCDC57Q2TAC2 916 aa14.24□□□□□ -0.13
TMEM116-202ENST00000437003 HSP90AA4PQ58FG1 418 aa14.24□□□□□ -0.13
TMEM116-202ENST00000437003 MUM1L1Q5H9M0 696 aa14.24□□□□□ -0.13
TMEM116-202ENST00000437003 CCDC158Q5M9N0 1113 aa14.24□□□□□ -0.13
TMEM116-202ENST00000437003 LLPHQ9BRT6 129 aaKnown RBP14.24□□□□□ -0.13
TMEM116-202ENST00000437003 CEP126Q9P2H0 1117 aa14.24□□□□□ -0.13
TMEM116-202ENST00000437003 LAMA4Q16363 1823 aa14.24□□□□□ -0.13
TMEM116-202ENST00000437003 PARP4Q9UKK3 1724 aaKnown RBP14.24□□□□□ -0.13
TMEM116-202ENST00000437003 SERPINC1P01008 464 aa14.24□□□□□ -0.13
TMEM116-202ENST00000437003 NCAPHQ15003 741 aa14.24□□□□□ -0.13
TMEM116-202ENST00000437003 NKX1-1Q15270 411 aaPredicted RBP14.24□□□□□ -0.13
TMEM116-202ENST00000437003 CFAP100Q494V2 611 aa14.24□□□□□ -0.13
TMEM116-202ENST00000437003 OSBP2Q969R2 916 aa14.24□□□□□ -0.13
TMEM116-202ENST00000437003 GJB4Q9NTQ9 266 aa14.24□□□□□ -0.13
TMEM116-202ENST00000437003 CLIC4Q9Y696 253 aa14.24□□□□□ -0.13
TMEM116-202ENST00000437003 RNF113AO15541 343 aaKnown RBP14.23□□□□□ -0.13
TMEM116-202ENST00000437003 ADORA1P30542 326 aa14.23□□□□□ -0.13
TMEM116-202ENST00000437003 GNG11P61952 73 aa14.23□□□□□ -0.13
TMEM116-202ENST00000437003 EXOSC10Q01780 885 aaKnown RBP14.23□□□□□ -0.13
TMEM116-202ENST00000437003 REXO1L1PQ8IX06 675 aa14.23□□□□□ -0.13
TMEM116-202ENST00000437003 WDR24Q96S15 920 aa14.23□□□□□ -0.13
TMEM116-202ENST00000437003 ARFGAP3Q9NP61 516 aa14.23□□□□□ -0.13
TMEM116-202ENST00000437003 ATG3Q9NT62 314 aa14.23□□□□□ -0.13
TMEM116-202ENST00000437003 CIAO1O76071 339 aa14.23□□□□□ -0.13
TMEM116-202ENST00000437003 UBASH3AP57075 661 aa14.23□□□□□ -0.13
TMEM116-202ENST00000437003 EVA1CP58658 441 aa14.23□□□□□ -0.13
TMEM116-202ENST00000437003 CC2D2BQ6DHV5 1058 aa14.23□□□□□ -0.13
TMEM116-202ENST00000437003 SRRTQ9BXP5 876 aaKnown RBP14.23□□□□□ -0.13
TMEM116-202ENST00000437003 TMEM232C9JQI7 657 aa14.22□□□□□ -0.13
TMEM116-202ENST00000437003 CLGNO14967 610 aa14.22□□□□□ -0.13
TMEM116-202ENST00000437003 TTC39AQ5SRH9 613 aa14.22□□□□□ -0.13
TMEM116-202ENST00000437003 ADALQ6DHV7 355 aa14.22□□□□□ -0.13
TMEM116-202ENST00000437003 PI16Q6UXB8 463 aa14.22□□□□□ -0.13
TMEM116-202ENST00000437003 UBXN6Q9BZV1 441 aa14.22□□□□□ -0.13
TMEM116-202ENST00000437003 ADAM21Q9UKJ8 722 aa14.22□□□□□ -0.13
TMEM116-202ENST00000437003 CARMIL3Q8ND23 1372 aa14.22□□□□□ -0.13
TMEM116-202ENST00000437003 KCPQ6ZWJ8 1503 aa14.22□□□□□ -0.13
TMEM116-202ENST00000437003 CCP110O43303 1012 aa14.22□□□□□ -0.13
TMEM116-202ENST00000437003 KCNJ6P48051 423 aa14.22□□□□□ -0.13
TMEM116-202ENST00000437003 PPP2R3AQ06190 1150 aa14.22□□□□□ -0.13
TMEM116-202ENST00000437003 CARD10Q9BWT7 1032 aa14.22□□□□□ -0.13
TMEM116-202ENST00000437003 PARD6BQ9BYG5 372 aa14.22□□□□□ -0.13
TMEM116-202ENST00000437003 COL5A2P05997 1499 aaPredicted RBP14.22□□□□□ -0.13
TMEM116-202ENST00000437003 VWA3AA6NCI4 1184 aa14.22□□□□□ -0.13
TMEM116-202ENST00000437003 H3BQF6 201 aa14.22□□□□□ -0.13
TMEM116-202ENST00000437003 TUBB4AP04350 444 aa14.22□□□□□ -0.13
TMEM116-202ENST00000437003 CASQ1P31415 396 aa14.22□□□□□ -0.13
TMEM116-202ENST00000437003 TCIRG1Q13488 830 aa14.22□□□□□ -0.13
TMEM116-202ENST00000437003 AK7Q96M32 723 aa14.22□□□□□ -0.13
TMEM116-202ENST00000437003 NEDD4P46934 1319 aa14.21□□□□□ -0.13
TMEM116-202ENST00000437003 NUP188Q5SRE5 1749 aa14.21□□□□□ -0.13
TMEM116-202ENST00000437003 ZNF202O95125 648 aa14.21□□□□□ -0.13
TMEM116-202ENST00000437003 NLRP12P59046 1061 aa14.21□□□□□ -0.13
TMEM116-202ENST00000437003 PDILTQ8N807 584 aa14.21□□□□□ -0.13
TMEM116-202ENST00000437003 FAM89AQ96GI7 184 aa14.21□□□□□ -0.13
TMEM116-202ENST00000437003 ISCA1Q9BUE6 129 aa14.21□□□□□ -0.13
TMEM116-202ENST00000437003 TMOD3Q9NYL9 352 aa14.21□□□□□ -0.13
TMEM116-202ENST00000437003 TPM1P09493 284 aa14.21□□□□□ -0.14
TMEM116-202ENST00000437003 FDPSP14324 419 aaKnown RBP14.21□□□□□ -0.14
TMEM116-202ENST00000437003 SCARF1Q14162 830 aa14.21□□□□□ -0.14
TMEM116-202ENST00000437003 LINC00301Q8NCQ3 95 aa14.21□□□□□ -0.14
TMEM116-202ENST00000437003 CWC15Q9P013 229 aaKnown RBP14.21□□□□□ -0.14
TMEM116-202ENST00000437003 PPP2R2CQ9Y2T4 447 aa14.21□□□□□ -0.14
TMEM116-202ENST00000437003 UBR2Q8IWV8 1755 aa14.2□□□□□ -0.14
TMEM116-202ENST00000437003 TJP1Q07157 1748 aa14.2□□□□□ -0.14
TMEM116-202ENST00000437003 GOLGA8BA8MQT2 603 aa14.2□□□□□ -0.14
TMEM116-202ENST00000437003 TOP1P11387 765 aaKnown RBP14.2□□□□□ -0.14
TMEM116-202ENST00000437003 IRX3P78415 501 aaPredicted RBP14.2□□□□□ -0.14
TMEM116-202ENST00000437003 MCM6Q14566 821 aa14.2□□□□□ -0.14
TMEM116-202ENST00000437003 GPR161Q8N6U8 529 aaKnown RBP14.2□□□□□ -0.14
TMEM116-202ENST00000437003 BPIFA3Q9BQP9 254 aa14.2□□□□□ -0.14
TMEM116-202ENST00000437003 FUT8Q9BYC5 575 aa14.2□□□□□ -0.14
TMEM116-202ENST00000437003 HSD3B7Q9H2F3 369 aa14.2□□□□□ -0.14
TMEM116-202ENST00000437003 AKAP2Q9Y2D5 859 aa14.2□□□□□ -0.14
TMEM116-202ENST00000437003 KLF18A0A0U1RQI7 1052 aa14.2□□□□□ -0.14
TMEM116-202ENST00000437003 XAGE2Q96GT9 111 aa14.2□□□□□ -0.14
TMEM116-202ENST00000437003 RRP15Q9Y3B9 282 aaKnown RBP14.2□□□□□ -0.14
TMEM116-202ENST00000437003 CPLX1O14810 134 aa14.19□□□□□ -0.14
TMEM116-202ENST00000437003 SPTLC2O15270 562 aa14.19□□□□□ -0.14
TMEM116-202ENST00000437003 ATP8B1O43520 1251 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms