RNA–Protein interactions for RNA: ENST00000436724.5

PTPRF-207, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 2,168 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-207ENST00000436724 FOXD4L3Q6VB84 417 aaPredicted RBP24.93■■□□□ 1.58
PTPRF-207ENST00000436724 CYB5R4Q7L1T6 521 aa24.93■■□□□ 1.58
PTPRF-207ENST00000436724 DZIP1Q86YF9 867 aaKnown RBP24.93■■□□□ 1.58
PTPRF-207ENST00000436724 C2CD5Q86YS7 1000 aa24.93■■□□□ 1.58
PTPRF-207ENST00000436724 CCDC88AQ3V6T2 1871 aa24.92■■□□□ 1.58
PTPRF-207ENST00000436724 ZBTB22O15209 634 aa24.92■■□□□ 1.58
PTPRF-207ENST00000436724 STX6O43752 255 aa24.92■■□□□ 1.58
PTPRF-207ENST00000436724 WDR33Q9C0J8 1336 aaKnown RBP24.92■■□□□ 1.58
PTPRF-207ENST00000436724 SALL1Q9NSC2 1324 aa24.92■■□□□ 1.58
PTPRF-207ENST00000436724 JAK2O60674 1132 aa24.91■■□□□ 1.58
PTPRF-207ENST00000436724 LDHBP07195 334 aaKnown RBP24.91■■□□□ 1.58
PTPRF-207ENST00000436724 IL1R1P14778 569 aa24.91■■□□□ 1.58
PTPRF-207ENST00000436724 CCT2P78371 535 aaKnown RBP24.91■■□□□ 1.58
PTPRF-207ENST00000436724 CHRNA5P30532 468 aa24.91■■□□□ 1.58
PTPRF-207ENST00000436724 L1TD1Q5T7N2 865 aaKnown RBP24.91■■□□□ 1.58
PTPRF-207ENST00000436724 GZF1Q9H116 711 aaPredicted RBP24.91■■□□□ 1.58
PTPRF-207ENST00000436724 PFKFB2O60825 505 aa24.9■■□□□ 1.58
PTPRF-207ENST00000436724 PDIA3P30101 505 aaKnown RBP24.9■■□□□ 1.58
PTPRF-207ENST00000436724 SPTY2D1Q68D10 685 aaPredicted RBP24.9■■□□□ 1.58
PTPRF-207ENST00000436724 FBXL16Q8N461 479 aa24.9■■□□□ 1.58
PTPRF-207ENST00000436724 NCOA5Q9HCD5 579 aaKnown RBP24.9■■□□□ 1.58
PTPRF-207ENST00000436724 FSD2A1L4K1 749 aa24.9■■□□□ 1.58
PTPRF-207ENST00000436724 DIXDC1Q155Q3 683 aa24.9■■□□□ 1.58
PTPRF-207ENST00000436724 MPNDQ8N594 471 aa24.9■■□□□ 1.58
PTPRF-207ENST00000436724 CHD4Q14839 1912 aa24.9■■□□□ 1.58
PTPRF-207ENST00000436724 BAZ2AQ9UIF9 1905 aaKnown RBP24.9■■□□□ 1.58
PTPRF-207ENST00000436724 DUOX1Q9NRD9 1551 aa24.89■■□□□ 1.58
PTPRF-207ENST00000436724 MAST2Q6P0Q8 1798 aa24.89■■□□□ 1.58
PTPRF-207ENST00000436724 MINDY4BA8MYZ0 360 aa24.89■■□□□ 1.58
PTPRF-207ENST00000436724 AKNAD1Q5T1N1 836 aa24.89■■□□□ 1.58
PTPRF-207ENST00000436724 H0YIN7 160 aa24.88■■□□□ 1.57
PTPRF-207ENST00000436724 QSER1Q2KHR3 1735 aa24.88■■□□□ 1.57
PTPRF-207ENST00000436724 CYP2D7A0A087X1C5 515 aa24.88■■□□□ 1.57
PTPRF-207ENST00000436724 ZSCAN22P10073 491 aaPredicted RBP24.88■■□□□ 1.57
PTPRF-207ENST00000436724 PPARAQ07869 468 aa24.88■■□□□ 1.57
PTPRF-207ENST00000436724 DPP8Q6V1X1 898 aaPredicted RBP24.88■■□□□ 1.57
PTPRF-207ENST00000436724 RAB11FIP4Q86YS3 637 aa24.88■■□□□ 1.57
PTPRF-207ENST00000436724 PPFIA3O75145 1194 aa24.87■■□□□ 1.57
PTPRF-207ENST00000436724 KDM4AO75164 1064 aa24.87■■□□□ 1.57
PTPRF-207ENST00000436724 MFSD6Q6ZSS7 791 aa24.87■■□□□ 1.57
PTPRF-207ENST00000436724 ZNF274Q96GC6 653 aaPredicted RBP24.87■■□□□ 1.57
PTPRF-207ENST00000436724 GOLGA6L22H0YM25 854 aa24.87■■□□□ 1.57
PTPRF-207ENST00000436724 EVCP57679 992 aa24.87■■□□□ 1.57
PTPRF-207ENST00000436724 RRP12Q5JTH9 1297 aaKnown RBP24.87■■□□□ 1.57
PTPRF-207ENST00000436724 LARP1BQ659C4 914 aaKnown RBP24.87■■□□□ 1.57
PTPRF-207ENST00000436724 DDX11Q96FC9 970 aa24.87■■□□□ 1.57
PTPRF-207ENST00000436724 TOMM22Q9NS69 142 aa24.87■■□□□ 1.57
PTPRF-207ENST00000436724 ZSWIM5Q9P217 1185 aa24.87■■□□□ 1.57
PTPRF-207ENST00000436724 ZNF219Q9P2Y4 722 aaPredicted RBP24.87■■□□□ 1.57
PTPRF-207ENST00000436724 MTMR6Q9Y217 621 aa24.87■■□□□ 1.57
PTPRF-207ENST00000436724 TIAM2Q8IVF5 1701 aa24.87■■□□□ 1.57
PTPRF-207ENST00000436724 KLF18A0A0U1RQI7 1052 aa24.86■■□□□ 1.57
PTPRF-207ENST00000436724 VPS37CA5D8V6 355 aaPredicted RBP24.86■■□□□ 1.57
PTPRF-207ENST00000436724 CTDNEP1O95476 244 aa24.86■■□□□ 1.57
PTPRF-207ENST00000436724 EVX2Q03828 476 aa24.86■■□□□ 1.57
PTPRF-207ENST00000436724 STAG1Q8WVM7 1258 aa24.86■■□□□ 1.57
PTPRF-207ENST00000436724 SENP2Q9HC62 589 aa24.86■■□□□ 1.57
PTPRF-207ENST00000436724 WDR19Q8NEZ3 1342 aa24.85■■□□□ 1.57
PTPRF-207ENST00000436724 MFSD14BQ5SR56 506 aa24.85■■□□□ 1.57
PTPRF-207ENST00000436724 ZC3H12CQ9C0D7 883 aaKnown RBP24.85■■□□□ 1.57
PTPRF-207ENST00000436724 GOLGA6L3A6NEY3 463 aa24.84■■□□□ 1.57
PTPRF-207ENST00000436724 NSUN7Q8NE18 718 aaKnown RBP24.84■■□□□ 1.57
PTPRF-207ENST00000436724 CRNKL1Q9BZJ0 848 aaKnown RBP24.84■■□□□ 1.57
PTPRF-207ENST00000436724 ANGEL1Q9UNK9 670 aaKnown RBP24.84■■□□□ 1.57
PTPRF-207ENST00000436724 SLX4Q8IY92 1834 aa24.84■■□□□ 1.57
PTPRF-207ENST00000436724 GTF2IP78347 998 aa24.84■■□□□ 1.57
PTPRF-207ENST00000436724 DOK7Q18PE1 504 aa24.84■■□□□ 1.57
PTPRF-207ENST00000436724 CTR9Q6PD62 1173 aa24.84■■□□□ 1.57
PTPRF-207ENST00000436724 DCP1AQ9NPI6 582 aaPredicted RBP24.84■■□□□ 1.57
PTPRF-207ENST00000436724 HPS5Q9UPZ3 1129 aa24.84■■□□□ 1.57
PTPRF-207ENST00000436724 GOLGA8BA8MQT2 603 aa24.83■■□□□ 1.57
PTPRF-207ENST00000436724 USP17L12C9JPN9 530 aa24.83■■□□□ 1.57
PTPRF-207ENST00000436724 USP17L21D6R901 530 aa24.83■■□□□ 1.57
PTPRF-207ENST00000436724 SH2B2O14492 632 aaPredicted RBP24.83■■□□□ 1.57
PTPRF-207ENST00000436724 F13A1P00488 732 aa24.83■■□□□ 1.57
PTPRF-207ENST00000436724 XRCC6P12956 609 aaKnown RBP eCLIP24.83■■□□□ 1.57
PTPRF-207ENST00000436724 STYK1Q6J9G0 422 aa24.83■■□□□ 1.57
PTPRF-207ENST00000436724 TMX4Q9H1E5 349 aaPredicted RBP24.83■■□□□ 1.57
PTPRF-207ENST00000436724 CNNM2Q9H8M5 875 aa24.83■■□□□ 1.57
PTPRF-207ENST00000436724 LMBRD1Q9NUN5 540 aa24.83■■□□□ 1.57
PTPRF-207ENST00000436724 PRPF40AO75400 957 aaKnown RBP24.83■■□□□ 1.56
PTPRF-207ENST00000436724 CDC37L1Q7L3B6 337 aa24.83■■□□□ 1.56
PTPRF-207ENST00000436724 SMARCC2Q8TAQ2 1214 aa24.83■■□□□ 1.56
PTPRF-207ENST00000436724 IGDCC4Q8TDY8 1250 aa24.83■■□□□ 1.56
PTPRF-207ENST00000436724 ZKSCAN3Q9BRR0 538 aa24.83■■□□□ 1.56
PTPRF-207ENST00000436724 KRT23Q9C075 422 aa24.83■■□□□ 1.56
PTPRF-207ENST00000436724 COA1Q9GZY4 146 aa24.82■■□□□ 1.56
PTPRF-207ENST00000436724 ANAPC4Q9UJX5 808 aa24.82■■□□□ 1.56
PTPRF-207ENST00000436724 MYH2Q9UKX2 1941 aa24.82■■□□□ 1.56
PTPRF-207ENST00000436724 PTPDC1A2A3K4 754 aa24.81■■□□□ 1.56
PTPRF-207ENST00000436724 SH3RF3Q8TEJ3 882 aaPredicted RBP24.81■■□□□ 1.56
PTPRF-207ENST00000436724 KIAA1551Q9HCM1 1747 aa24.81■■□□□ 1.56
PTPRF-207ENST00000436724 SLC4A8Q2Y0W8 1093 aa24.81■■□□□ 1.56
PTPRF-207ENST00000436724 FBXW7Q969H0 707 aa24.81■■□□□ 1.56
PTPRF-207ENST00000436724 LLPHQ9BRT6 129 aaKnown RBP24.81■■□□□ 1.56
PTPRF-207ENST00000436724 GDPD2Q9HCC8 539 aa24.81■■□□□ 1.56
PTPRF-207ENST00000436724 TCHHQ07283 1943 aa24.81■■□□□ 1.56
PTPRF-207ENST00000436724 RXRAP19793 462 aa24.8■■□□□ 1.56
PTPRF-207ENST00000436724 PDCP20941 246 aa24.8■■□□□ 1.56
PTPRF-207ENST00000436724 GSTO1P78417 241 aa24.8■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms