RNA–Protein interactions for RNA: ENST00000435986.1

HMGB1P45-201, Transcript of high mobility group box 1 pseudogene 45, humanhuman

BASIC

Gene HMGB1P45, Length 653 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P45-201ENST00000435986 PODNQ7Z5L7 613 aa6.8□□□□□ -1.32
HMGB1P45-201ENST00000435986 NOP9Q86U38 636 aaKnown RBP6.8□□□□□ -1.32
HMGB1P45-201ENST00000435986 PMFBP1Q8TBY8 1022 aa6.8□□□□□ -1.32
HMGB1P45-201ENST00000435986 GATAD2BQ8WXI9 593 aa6.8□□□□□ -1.32
HMGB1P45-201ENST00000435986 SLC7A3Q8WY07 619 aa6.8□□□□□ -1.32
HMGB1P45-201ENST00000435986 JARID2Q92833 1246 aaPredicted RBP6.8□□□□□ -1.32
HMGB1P45-201ENST00000435986 EAF1Q96JC9 268 aaPredicted RBP6.8□□□□□ -1.32
HMGB1P45-201ENST00000435986 SH2B1Q9NRF2 756 aaPredicted RBP6.8□□□□□ -1.32
HMGB1P45-201ENST00000435986 NAGPAQ9UK23 515 aa6.8□□□□□ -1.32
HMGB1P45-201ENST00000435986 TRIM37O94972 964 aa6.79□□□□□ -1.32
HMGB1P45-201ENST00000435986 AMPD1P23109 780 aa6.79□□□□□ -1.32
HMGB1P45-201ENST00000435986 SOX9P48436 509 aa6.79□□□□□ -1.32
HMGB1P45-201ENST00000435986 NFE2L2Q16236 605 aa6.79□□□□□ -1.32
HMGB1P45-201ENST00000435986 ZNF423Q2M1K9 1284 aa6.79□□□□□ -1.32
HMGB1P45-201ENST00000435986 ACSBG1Q96GR2 724 aa6.79□□□□□ -1.32
HMGB1P45-201ENST00000435986 FERD3LQ96RJ6 166 aa6.79□□□□□ -1.32
HMGB1P45-201ENST00000435986 LRRC3Q9BY71 257 aa6.79□□□□□ -1.32
HMGB1P45-201ENST00000435986 TRIM55Q9BYV6 548 aa6.79□□□□□ -1.32
HMGB1P45-201ENST00000435986 MKL2Q9ULH7 1088 aa6.79□□□□□ -1.32
HMGB1P45-201ENST00000435986 PAGE1O75459 146 aa6.78□□□□□ -1.32
HMGB1P45-201ENST00000435986 BMP6P22004 513 aa6.78□□□□□ -1.32
HMGB1P45-201ENST00000435986 TNNI3KQ59H18 835 aa6.78□□□□□ -1.32
HMGB1P45-201ENST00000435986 SLITRK4Q8IW52 837 aa6.78□□□□□ -1.32
HMGB1P45-201ENST00000435986 KLHL23Q8NBE8 558 aa6.78□□□□□ -1.32
HMGB1P45-201ENST00000435986 KCNB2Q92953 911 aa6.78□□□□□ -1.32
HMGB1P45-201ENST00000435986 SRRTQ9BXP5 876 aaKnown RBP6.78□□□□□ -1.32
HMGB1P45-201ENST00000435986 RRAGCQ9HB90 399 aa6.78□□□□□ -1.32
HMGB1P45-201ENST00000435986 GINM1Q9NU53 330 aa6.78□□□□□ -1.32
HMGB1P45-201ENST00000435986 UBP1Q9NZI7 540 aa6.78□□□□□ -1.32
HMGB1P45-201ENST00000435986 SOX1O00570 391 aaPredicted RBP6.77□□□□□ -1.33
HMGB1P45-201ENST00000435986 GSTP1P09211 210 aaKnown RBP6.77□□□□□ -1.33
HMGB1P45-201ENST00000435986 EPHA1P21709 976 aa6.77□□□□□ -1.33
HMGB1P45-201ENST00000435986 POU4F3Q15319 338 aa6.77□□□□□ -1.33
HMGB1P45-201ENST00000435986 SEZ6Q53EL9 994 aa6.77□□□□□ -1.33
HMGB1P45-201ENST00000435986 FBXW10Q5XX13 1052 aa6.77□□□□□ -1.33
HMGB1P45-201ENST00000435986 REXO1Q8N1G1 1221 aaKnown RBP6.77□□□□□ -1.33
HMGB1P45-201ENST00000435986 OR6P1Q8NGX9 317 aa6.77□□□□□ -1.33
HMGB1P45-201ENST00000435986 DCAF5Q96JK2 942 aa6.77□□□□□ -1.33
HMGB1P45-201ENST00000435986 LNPKQ9C0E8 428 aa6.77□□□□□ -1.33
HMGB1P45-201ENST00000435986 KRT82Q9NSB4 513 aa6.77□□□□□ -1.33
HMGB1P45-201ENST00000435986 TMA7Q9Y2S6 64 aaKnown RBP6.77□□□□□ -1.33
HMGB1P45-201ENST00000435986 LINC01387J3KSC0 135 aa6.76□□□□□ -1.33
HMGB1P45-201ENST00000435986 M0R082 166 aa6.76□□□□□ -1.33
HMGB1P45-201ENST00000435986 PIK3R2O00459 728 aa6.76□□□□□ -1.33
HMGB1P45-201ENST00000435986 FSCN2O14926 492 aa6.76□□□□□ -1.33
HMGB1P45-201ENST00000435986 F13A1P00488 732 aa6.76□□□□□ -1.33
HMGB1P45-201ENST00000435986 HMGB1P09429 215 aaKnown RBP6.76□□□□□ -1.33
HMGB1P45-201ENST00000435986 GARTP22102 1010 aa6.76□□□□□ -1.33
HMGB1P45-201ENST00000435986 COL8A1P27658 744 aa6.76□□□□□ -1.33
HMGB1P45-201ENST00000435986 CDC25BP30305 580 aa6.76□□□□□ -1.33
HMGB1P45-201ENST00000435986 EIF6P56537 245 aaKnown RBP6.76□□□□□ -1.33
HMGB1P45-201ENST00000435986 RPL6Q02878 288 aaKnown RBP6.76□□□□□ -1.33
HMGB1P45-201ENST00000435986 MAP1SQ66K74 1059 aaPredicted RBP6.76□□□□□ -1.33
HMGB1P45-201ENST00000435986 MSL1Q68DK7 614 aa6.76□□□□□ -1.33
HMGB1P45-201ENST00000435986 GPAT2Q6NUI2 795 aa6.76□□□□□ -1.33
HMGB1P45-201ENST00000435986 ZNF417Q8TAU3 575 aa6.76□□□□□ -1.33
HMGB1P45-201ENST00000435986 ZNF587Q96SQ5 575 aaPredicted RBP6.76□□□□□ -1.33
HMGB1P45-201ENST00000435986 STARD13Q9Y3M8 1113 aa6.76□□□□□ -1.33
HMGB1P45-201ENST00000435986 PCDHB5Q9Y5E4 795 aa6.76□□□□□ -1.33
HMGB1P45-201ENST00000435986 GNB5O14775 395 aa6.75□□□□□ -1.33
HMGB1P45-201ENST00000435986 TLR3O15455 904 aaKnown RBP6.75□□□□□ -1.33
HMGB1P45-201ENST00000435986 CILPO75339 1184 aa6.75□□□□□ -1.33
HMGB1P45-201ENST00000435986 AFF1P51825 1210 aaKnown RBP6.75□□□□□ -1.33
HMGB1P45-201ENST00000435986 SEPT6Q14141 434 aa6.75□□□□□ -1.33
HMGB1P45-201ENST00000435986 PDE3AQ14432 1141 aa6.75□□□□□ -1.33
HMGB1P45-201ENST00000435986 SUZ12Q15022 739 aaKnown RBP6.75□□□□□ -1.33
HMGB1P45-201ENST00000435986 LRRFIP1Q32MZ4 808 aaKnown RBP6.75□□□□□ -1.33
HMGB1P45-201ENST00000435986 BNC2Q6ZN30 1099 aaPredicted RBP6.75□□□□□ -1.33
HMGB1P45-201ENST00000435986 HDXQ7Z353 690 aa6.75□□□□□ -1.33
HMGB1P45-201ENST00000435986 ANAPC16Q96DE5 110 aa6.75□□□□□ -1.33
HMGB1P45-201ENST00000435986 MRFAP1L1Q96HT8 127 aa6.75□□□□□ -1.33
HMGB1P45-201ENST00000435986 OSBPL2Q9H1P3 480 aa6.75□□□□□ -1.33
HMGB1P45-201ENST00000435986 ZSWIM4Q9H7M6 989 aa6.75□□□□□ -1.33
HMGB1P45-201ENST00000435986 PRDM6Q9NQX0 595 aa6.75□□□□□ -1.33
HMGB1P45-201ENST00000435986 SPDYE3A6NKU9 549 aa6.74□□□□□ -1.33
HMGB1P45-201ENST00000435986 ALBP02768 609 aa6.74□□□□□ -1.33
HMGB1P45-201ENST00000435986 SLFN14P0C7P3 912 aa6.74□□□□□ -1.33
HMGB1P45-201ENST00000435986 COL9A3Q14050 684 aaPredicted RBP6.74□□□□□ -1.33
HMGB1P45-201ENST00000435986 CCDC144BQ3MJ40 725 aa6.74□□□□□ -1.33
HMGB1P45-201ENST00000435986 C20orf204Q6ZNR8 217 aa6.74□□□□□ -1.33
HMGB1P45-201ENST00000435986 REC114Q7Z4M0 266 aa6.74□□□□□ -1.33
HMGB1P45-201ENST00000435986 DTWD1Q8N5C7 304 aa6.74□□□□□ -1.33
HMGB1P45-201ENST00000435986 TRIM11Q96F44 468 aa6.74□□□□□ -1.33
HMGB1P45-201ENST00000435986 ZNF408Q9H9D4 720 aa6.74□□□□□ -1.33
HMGB1P45-201ENST00000435986 SIRPGQ9P1W8 387 aa6.74□□□□□ -1.33
HMGB1P45-201ENST00000435986 PRKAG3Q9UGI9 489 aa6.74□□□□□ -1.33
HMGB1P45-201ENST00000435986 PCDHA4Q9UN74 947 aa6.74□□□□□ -1.33
HMGB1P45-201ENST00000435986 SNCAIPQ9Y6H5 919 aa6.74□□□□□ -1.33
HMGB1P45-201ENST00000435986 FAM221AA4D161 298 aa6.73□□□□□ -1.33
HMGB1P45-201ENST00000435986 CLSTN1O94985 981 aa6.73□□□□□ -1.33
HMGB1P45-201ENST00000435986 PDE4BQ07343 736 aa6.73□□□□□ -1.33
HMGB1P45-201ENST00000435986 ZNF252P-AS1Q0IIN9 211 aa6.73□□□□□ -1.33
HMGB1P45-201ENST00000435986 ANKS3Q6ZW76 656 aa6.73□□□□□ -1.33
HMGB1P45-201ENST00000435986 ELMO3Q96BJ8 720 aa6.73□□□□□ -1.33
HMGB1P45-201ENST00000435986 TACC3Q9Y6A5 838 aa6.73□□□□□ -1.33
HMGB1P45-201ENST00000435986 SMARCA5O60264 1052 aaPredicted RBP6.72□□□□□ -1.33
HMGB1P45-201ENST00000435986 MAOBP27338 520 aa6.72□□□□□ -1.33
HMGB1P45-201ENST00000435986 RAC1P63000 192 aa6.72□□□□□ -1.33
HMGB1P45-201ENST00000435986 GRIK5Q16478 980 aa6.72□□□□□ -1.33
HMGB1P45-201ENST00000435986 PLA2G4EQ3MJ16 856 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms