RNA–Protein interactions for RNA: ENST00000435532.7

NEDD4-202, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD4, Length 5,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-202ENST00000435532 PAFAH1B1P43034 410 aa17.72■□□□□ 0.43
NEDD4-202ENST00000435532 GSDMDP57764 484 aa17.72■□□□□ 0.43
NEDD4-202ENST00000435532 IL17REQ8NFR9 667 aa17.72■□□□□ 0.43
NEDD4-202ENST00000435532 IFT74Q96LB3 600 aa17.72■□□□□ 0.43
NEDD4-202ENST00000435532 MACROD2A1Z1Q3 448 aa17.71■□□□□ 0.43
NEDD4-202ENST00000435532 CCDC117Q8IWD4 279 aaPredicted RBP17.71■□□□□ 0.43
NEDD4-202ENST00000435532 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.71■□□□□ 0.433e-7■■■■■ 29.4
NEDD4-202ENST00000435532 ARHGAP31Q2M1Z3 1444 aa17.71■□□□□ 0.43
NEDD4-202ENST00000435532 B4E1Z4 1266 aa17.71■□□□□ 0.43
NEDD4-202ENST00000435532 MYCLP12524 364 aaPredicted RBP17.71■□□□□ 0.43
NEDD4-202ENST00000435532 TBC1D32Q96NH3 1257 aa17.71■□□□□ 0.43
NEDD4-202ENST00000435532 SPAG5Q96R06 1193 aa17.71■□□□□ 0.43
NEDD4-202ENST00000435532 TBC1D2Q9BYX2 928 aa17.71■□□□□ 0.43
NEDD4-202ENST00000435532 NEMFO60524 1076 aa17.71■□□□□ 0.43
NEDD4-202ENST00000435532 CLASP1Q7Z460 1538 aa17.71■□□□□ 0.43
NEDD4-202ENST00000435532 PLVAPQ9BX97 442 aa17.71■□□□□ 0.43
NEDD4-202ENST00000435532 ACTN2P35609 894 aa17.71■□□□□ 0.43
NEDD4-202ENST00000435532 CHST3Q7LGC8 479 aa17.71■□□□□ 0.43
NEDD4-202ENST00000435532 PLEKHM2Q8IWE5 1019 aa17.7■□□□□ 0.42
NEDD4-202ENST00000435532 DOK7Q18PE1 504 aa17.7■□□□□ 0.42
NEDD4-202ENST00000435532 ASAP1Q9ULH1 1129 aa17.7■□□□□ 0.42
NEDD4-202ENST00000435532 ZNF532Q9HCE3 1301 aa17.7■□□□□ 0.42
NEDD4-202ENST00000435532 ADCY7P51828 1080 aa17.7■□□□□ 0.42
NEDD4-202ENST00000435532 LUZP1Q86V48 1076 aa17.7■□□□□ 0.42
NEDD4-202ENST00000435532 CCDC65Q8IXS2 484 aa17.7■□□□□ 0.42
NEDD4-202ENST00000435532 SYNMO15061 1565 aa17.7■□□□□ 0.42
NEDD4-202ENST00000435532 KLHDC4Q8TBB5 520 aa17.7■□□□□ 0.42
NEDD4-202ENST00000435532 CPLX3Q8WVH0 158 aa17.7■□□□□ 0.42
NEDD4-202ENST00000435532 CLIP2Q9UDT6 1046 aa17.7■□□□□ 0.42
NEDD4-202ENST00000435532 SEMA3EO15041 775 aa17.7■□□□□ 0.42
NEDD4-202ENST00000435532 N4BP3O15049 544 aa17.7■□□□□ 0.42
NEDD4-202ENST00000435532 DNM2P50570 870 aa17.7■□□□□ 0.42
NEDD4-202ENST00000435532 TTLL7Q6ZT98 887 aa17.7■□□□□ 0.42
NEDD4-202ENST00000435532 MCM3P25205 808 aa17.69■□□□□ 0.42
NEDD4-202ENST00000435532 MCTP2Q6DN12 878 aa17.69■□□□□ 0.42
NEDD4-202ENST00000435532 RTKN2Q8IZC4 609 aa17.69■□□□□ 0.42
NEDD4-202ENST00000435532 GBP3Q9H0R5 595 aa17.69■□□□□ 0.42
NEDD4-202ENST00000435532 SPTLC2O15270 562 aa17.69■□□□□ 0.42
NEDD4-202ENST00000435532 CASQ1P31415 396 aa17.69■□□□□ 0.42
NEDD4-202ENST00000435532 GADL1Q6ZQY3 521 aa17.69■□□□□ 0.42
NEDD4-202ENST00000435532 CCDC91Q7Z6B0 441 aa17.69■□□□□ 0.42
NEDD4-202ENST00000435532 NLRX1Q86UT6 975 aa17.69■□□□□ 0.42
NEDD4-202ENST00000435532 TAX1BP1Q86VP1 789 aa17.69■□□□□ 0.42
NEDD4-202ENST00000435532 PKD2L1Q9P0L9 805 aa17.69■□□□□ 0.42
NEDD4-202ENST00000435532 TET3O43151 1660 aa17.69■□□□□ 0.42
NEDD4-202ENST00000435532 GSTTP1A0A1W2PQM5 241 aa17.69■□□□□ 0.42
NEDD4-202ENST00000435532 SUPT20HL1Q3ZLR7 823 aa17.69■□□□□ 0.42
NEDD4-202ENST00000435532 ZNF804BA4D1E1 1349 aa17.69■□□□□ 0.42
NEDD4-202ENST00000435532 ZAP70P43403 619 aa17.69■□□□□ 0.42
NEDD4-202ENST00000435532 ARMC9Q7Z3E5 817 aa17.69■□□□□ 0.42
NEDD4-202ENST00000435532 EXOC7Q9UPT5 735 aa17.69■□□□□ 0.42
NEDD4-202ENST00000435532 ERBB3P21860 1342 aa17.69■□□□□ 0.42
NEDD4-202ENST00000435532 RPL13P26373 211 aaKnown RBP17.69■□□□□ 0.42
NEDD4-202ENST00000435532 PLCD1P51178 756 aa17.69■□□□□ 0.42
NEDD4-202ENST00000435532 UBE4AQ14139 1066 aa17.69■□□□□ 0.42
NEDD4-202ENST00000435532 ZNF354CQ86Y25 554 aa17.69■□□□□ 0.42
NEDD4-202ENST00000435532 ADGRL3Q9HAR2 1447 aa17.68■□□□□ 0.42
NEDD4-202ENST00000435532 TCP10L2B9ZVM9 353 aa17.68■□□□□ 0.42
NEDD4-202ENST00000435532 PPP1R2P41236 205 aa17.68■□□□□ 0.42
NEDD4-202ENST00000435532 NSMFQ6X4W1 530 aa17.68■□□□□ 0.42
NEDD4-202ENST00000435532 MTERF4Q7Z6M4 381 aaKnown RBP17.68■□□□□ 0.42
NEDD4-202ENST00000435532 FMNL3Q8IVF7 1028 aa17.68■□□□□ 0.42
NEDD4-202ENST00000435532 CENPHQ9H3R5 247 aa17.68■□□□□ 0.42
NEDD4-202ENST00000435532 CEP83Q9Y592 693 aa17.68■□□□□ 0.42
NEDD4-202ENST00000435532 LETM2Q2VYF4 491 aa17.68■□□□□ 0.42
NEDD4-202ENST00000435532 CPXCR1Q8N123 301 aa17.68■□□□□ 0.42
NEDD4-202ENST00000435532 DHX58Q96C10 678 aa17.68■□□□□ 0.42
NEDD4-202ENST00000435532 ATF5Q9Y2D1 282 aaPredicted RBP17.68■□□□□ 0.42
NEDD4-202ENST00000435532 MRVI1Q9Y6F6 885 aa17.68■□□□□ 0.42
NEDD4-202ENST00000435532 IGSF1Q8N6C5 1336 aa17.68■□□□□ 0.42
NEDD4-202ENST00000435532 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.68■□□□□ 0.42
NEDD4-202ENST00000435532 CHRNDQ07001 517 aa17.68■□□□□ 0.42
NEDD4-202ENST00000435532 JCADQ9P266 1359 aa17.68■□□□□ 0.42
NEDD4-202ENST00000435532 NOP2P46087 812 aaKnown RBP17.68■□□□□ 0.42
NEDD4-202ENST00000435532 STRN3Q13033 797 aa17.68■□□□□ 0.42
NEDD4-202ENST00000435532 SV2BQ7L1I2 683 aa17.68■□□□□ 0.42
NEDD4-202ENST00000435532 SMC5Q8IY18 1101 aa17.68■□□□□ 0.42
NEDD4-202ENST00000435532 TMCO5BA8MYB1 307 aa17.67■□□□□ 0.42
NEDD4-202ENST00000435532 KRT25Q7Z3Z0 450 aa17.67■□□□□ 0.42
NEDD4-202ENST00000435532 ANGEL1Q9UNK9 670 aaKnown RBP17.67■□□□□ 0.42
NEDD4-202ENST00000435532 ERVV-1B6SEH8 477 aa17.67■□□□□ 0.42
NEDD4-202ENST00000435532 ATL3Q6DD88 541 aa17.67■□□□□ 0.42
NEDD4-202ENST00000435532 COMMD10Q9Y6G5 202 aa17.67■□□□□ 0.42
NEDD4-202ENST00000435532 NPR1P16066 1061 aa17.67■□□□□ 0.42
NEDD4-202ENST00000435532 CCT6AP40227 531 aaKnown RBP17.67■□□□□ 0.42
NEDD4-202ENST00000435532 HACE1Q8IYU2 909 aa17.67■□□□□ 0.42
NEDD4-202ENST00000435532 NAA15Q9BXJ9 866 aaKnown RBP17.67■□□□□ 0.42
NEDD4-202ENST00000435532 KCNG1Q9UIX4 513 aa17.67■□□□□ 0.42
NEDD4-202ENST00000435532 GIGYF2Q6Y7W6 1299 aaKnown RBP17.67■□□□□ 0.42
NEDD4-202ENST00000435532 KIAA0825Q8IV33 1275 aa17.67■□□□□ 0.42
NEDD4-202ENST00000435532 PRPHP41219 470 aa17.66■□□□□ 0.42
NEDD4-202ENST00000435532 GNPTABQ3T906 1256 aa17.66■□□□□ 0.42
NEDD4-202ENST00000435532 ZNF710Q8N1W2 664 aa17.66■□□□□ 0.42
NEDD4-202ENST00000435532 EHBP1Q8NDI1 1231 aa17.66■□□□□ 0.42
NEDD4-202ENST00000435532 SSX2IPQ9Y2D8 614 aa17.66■□□□□ 0.42
NEDD4-202ENST00000435532 RPS6KB1P23443 525 aa17.66■□□□□ 0.42
NEDD4-202ENST00000435532 MARCKSP29966 332 aaPredicted RBP17.66■□□□□ 0.42
NEDD4-202ENST00000435532 ERCC6L2Q5T890 1561 aa17.66■□□□□ 0.42
NEDD4-202ENST00000435532 GOLGA6L9A6NEM1 432 aa17.66■□□□□ 0.42
NEDD4-202ENST00000435532 TNNT1P13805 278 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms