RNA–Protein interactions for RNA: ENST00000435145.6

HLA-DQB2-231, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 2,026 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-231ENST00000435145 SDF4Q9BRK5 362 aa18.68■□□□□ 0.58
HLA-DQB2-231ENST00000435145 ALG1Q9BT22 464 aa18.68■□□□□ 0.58
HLA-DQB2-231ENST00000435145 LY9Q9HBG7 655 aa18.68■□□□□ 0.58
HLA-DQB2-231ENST00000435145 SENP2Q9HC62 589 aa18.68■□□□□ 0.58
HLA-DQB2-231ENST00000435145 FAM217BQ9NTX9 383 aaPredicted RBP18.68■□□□□ 0.58
HLA-DQB2-231ENST00000435145 A0A087WWV3 80 aa18.67■□□□□ 0.58
HLA-DQB2-231ENST00000435145 NEMFO60524 1076 aa18.67■□□□□ 0.58
HLA-DQB2-231ENST00000435145 APPP05067 770 aa18.67■□□□□ 0.58
HLA-DQB2-231ENST00000435145 LIFRP42702 1097 aa18.67■□□□□ 0.58
HLA-DQB2-231ENST00000435145 SUSD4Q5VX71 490 aa18.67■□□□□ 0.58
HLA-DQB2-231ENST00000435145 INTS5Q6P9B9 1019 aaKnown RBP18.67■□□□□ 0.58
HLA-DQB2-231ENST00000435145 AIDAQ96BJ3 306 aa18.67■□□□□ 0.58
HLA-DQB2-231ENST00000435145 CICQ96RK0 1608 aaPredicted RBP18.67■□□□□ 0.58
HLA-DQB2-231ENST00000435145 HELBQ8NG08 1087 aaPredicted RBP18.67■□□□□ 0.58
HLA-DQB2-231ENST00000435145 AIFM3Q96NN9 605 aa18.67■□□□□ 0.58
HLA-DQB2-231ENST00000435145 ECM29Q5VYK3 1845 aa18.66■□□□□ 0.58
HLA-DQB2-231ENST00000435145 FAM237AA0A1B0GTK4 181 aa18.66■□□□□ 0.58
HLA-DQB2-231ENST00000435145 RBM6P78332 1123 aaKnown RBP18.66■□□□□ 0.58
HLA-DQB2-231ENST00000435145 MAP3K12Q12852 859 aa18.66■□□□□ 0.58
HLA-DQB2-231ENST00000435145 KRT40Q6A162 431 aa18.66■□□□□ 0.58
HLA-DQB2-231ENST00000435145 CPLX2Q6PUV4 134 aaKnown RBP18.66■□□□□ 0.58
HLA-DQB2-231ENST00000435145 VPS37DQ86XT2 251 aa18.66■□□□□ 0.58
HLA-DQB2-231ENST00000435145 LRRC8AQ8IWT6 810 aa18.66■□□□□ 0.58
HLA-DQB2-231ENST00000435145 IFNL3Q8IZI9 196 aa18.66■□□□□ 0.58
HLA-DQB2-231ENST00000435145 AOPEPQ8N6M6 819 aa18.66■□□□□ 0.58
HLA-DQB2-231ENST00000435145 STK36Q9NRP7 1315 aa18.66■□□□□ 0.58
HLA-DQB2-231ENST00000435145 ZBTB43O43298 467 aa18.66■□□□□ 0.58
HLA-DQB2-231ENST00000435145 WDHD1O75717 1129 aaPredicted RBP18.66■□□□□ 0.58
HLA-DQB2-231ENST00000435145 ZNF202O95125 648 aa18.66■□□□□ 0.58
HLA-DQB2-231ENST00000435145 U2AF2P26368 475 aaKnown RBP eCLIP18.66■□□□□ 0.58
HLA-DQB2-231ENST00000435145 CHAF1AQ13111 956 aaPredicted RBP18.66■□□□□ 0.58
HLA-DQB2-231ENST00000435145 PTPAQ15257 358 aa18.66■□□□□ 0.58
HLA-DQB2-231ENST00000435145 GLIPR1L2Q4G1C9 344 aa18.66■□□□□ 0.58
HLA-DQB2-231ENST00000435145 ZNF710Q8N1W2 664 aa18.66■□□□□ 0.58
HLA-DQB2-231ENST00000435145 ERCC4Q92889 916 aaPredicted RBP18.66■□□□□ 0.58
HLA-DQB2-231ENST00000435145 TIGD1Q96MW7 591 aa18.66■□□□□ 0.58
HLA-DQB2-231ENST00000435145 TACC3Q9Y6A5 838 aa18.66■□□□□ 0.58
HLA-DQB2-231ENST00000435145 MROH7-TTC4A0A0A0MT08 1334 aa18.65■□□□□ 0.58
HLA-DQB2-231ENST00000435145 PPP6R2O75170 966 aa18.65■□□□□ 0.58
HLA-DQB2-231ENST00000435145 PFKFB1P16118 471 aa18.65■□□□□ 0.58
HLA-DQB2-231ENST00000435145 DPCR1Q3MIW9 517 aa18.65■□□□□ 0.58
HLA-DQB2-231ENST00000435145 MAGEB6Q8N7X4 407 aa18.65■□□□□ 0.58
HLA-DQB2-231ENST00000435145 SYTL4Q96C24 671 aaPredicted RBP18.65■□□□□ 0.58
HLA-DQB2-231ENST00000435145 CCDC87Q9NVE4 849 aa18.65■□□□□ 0.58
HLA-DQB2-231ENST00000435145 HPSEQ9Y251 543 aa18.65■□□□□ 0.58
HLA-DQB2-231ENST00000435145 PNPLA7Q6ZV29 1317 aa18.65■□□□□ 0.58
HLA-DQB2-231ENST00000435145 GSG1L2A8MUP6 293 aa18.64■□□□□ 0.58
HLA-DQB2-231ENST00000435145 RIOK3O14730 519 aaKnown RBP18.64■□□□□ 0.58
HLA-DQB2-231ENST00000435145 RANBP6O60518 1105 aaKnown RBP18.64■□□□□ 0.58
HLA-DQB2-231ENST00000435145 MBD4O95243 580 aa18.64■□□□□ 0.58
HLA-DQB2-231ENST00000435145 MAP3K14Q99558 947 aa18.64■□□□□ 0.58
HLA-DQB2-231ENST00000435145 UTP14AQ9BVJ6 771 aaKnown RBP18.64■□□□□ 0.58
HLA-DQB2-231ENST00000435145 LAMB2P55268 1798 aa18.64■□□□□ 0.57
HLA-DQB2-231ENST00000435145 PHLPP1O60346 1717 aa18.64■□□□□ 0.57
HLA-DQB2-231ENST00000435145 CTIFO43310 598 aaKnown RBP18.64■□□□□ 0.57
HLA-DQB2-231ENST00000435145 SLC3A2P08195 630 aaKnown RBP18.64■□□□□ 0.57
HLA-DQB2-231ENST00000435145 PARP10Q53GL7 1025 aa18.64■□□□□ 0.57
HLA-DQB2-231ENST00000435145 TMEM67Q5HYA8 995 aa18.64■□□□□ 0.57
HLA-DQB2-231ENST00000435145 MICU3Q86XE3 530 aa18.64■□□□□ 0.57
HLA-DQB2-231ENST00000435145 NAPBQ9H115 298 aa18.64■□□□□ 0.57
HLA-DQB2-231ENST00000435145 CNNM2Q9H8M5 875 aa18.64■□□□□ 0.57
HLA-DQB2-231ENST00000435145 BCL9LQ86UU0 1499 aa18.64■□□□□ 0.57
HLA-DQB2-231ENST00000435145 BCORQ6W2J9 1755 aa18.63■□□□□ 0.57
HLA-DQB2-231ENST00000435145 GOLGA8AA7E2F4 631 aa18.63■□□□□ 0.57
HLA-DQB2-231ENST00000435145 CAMTA2O94983 1202 aa18.63■□□□□ 0.57
HLA-DQB2-231ENST00000435145 RXRAP19793 462 aa18.63■□□□□ 0.57
HLA-DQB2-231ENST00000435145 NLRP12P59046 1061 aa18.63■□□□□ 0.57
HLA-DQB2-231ENST00000435145 AKNAD1Q5T1N1 836 aa18.63■□□□□ 0.57
HLA-DQB2-231ENST00000435145 PHKBQ93100 1093 aa18.63■□□□□ 0.57
HLA-DQB2-231ENST00000435145 CDCA7Q9BWT1 371 aaPredicted RBP18.63■□□□□ 0.57
HLA-DQB2-231ENST00000435145 SEC31BQ9NQW1 1179 aa18.63■□□□□ 0.57
HLA-DQB2-231ENST00000435145 ZSWIM5Q9P217 1185 aa18.63■□□□□ 0.57
HLA-DQB2-231ENST00000435145 AHDC1Q5TGY3 1603 aaPredicted RBP18.63■□□□□ 0.57
HLA-DQB2-231ENST00000435145 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.62■□□□□ 0.57
HLA-DQB2-231ENST00000435145 IARSP41252 1262 aaKnown RBP18.62■□□□□ 0.57
HLA-DQB2-231ENST00000435145 STAG1Q8WVM7 1258 aa18.62■□□□□ 0.57
HLA-DQB2-231ENST00000435145 TSC1Q92574 1164 aa18.62■□□□□ 0.57
HLA-DQB2-231ENST00000435145 MPHOSPH8Q99549 860 aa18.62■□□□□ 0.57
HLA-DQB2-231ENST00000435145 MTA3Q9BTC8 594 aa18.62■□□□□ 0.57
HLA-DQB2-231ENST00000435145 KRT23Q9C075 422 aa18.62■□□□□ 0.57
HLA-DQB2-231ENST00000435145 OSBPL5Q9H0X9 879 aaPredicted RBP18.62■□□□□ 0.57
HLA-DQB2-231ENST00000435145 ARMT1Q9H993 441 aa18.62■□□□□ 0.57
HLA-DQB2-231ENST00000435145 INCENPQ9NQS7 918 aa18.62■□□□□ 0.57
HLA-DQB2-231ENST00000435145 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.62■□□□□ 0.57
HLA-DQB2-231ENST00000435145 CHD4Q14839 1912 aa18.62■□□□□ 0.57
HLA-DQB2-231ENST00000435145 SNAP23O00161 211 aa18.62■□□□□ 0.57
HLA-DQB2-231ENST00000435145 GNAT2P19087 354 aa18.62■□□□□ 0.57
HLA-DQB2-231ENST00000435145 CRKLP46109 303 aaKnown RBP18.62■□□□□ 0.57
HLA-DQB2-231ENST00000435145 ARID5BQ14865 1188 aa18.62■□□□□ 0.57
HLA-DQB2-231ENST00000435145 NBPF11Q86T75 865 aa18.62■□□□□ 0.57
HLA-DQB2-231ENST00000435145 JMYQ8N9B5 988 aa18.62■□□□□ 0.57
HLA-DQB2-231ENST00000435145 KCND1Q9NSA2 647 aa18.62■□□□□ 0.57
HLA-DQB2-231ENST00000435145 TUBE1Q9UJT0 475 aa18.62■□□□□ 0.57
HLA-DQB2-231ENST00000435145 FMNL1O95466 1100 aaPredicted RBP18.61■□□□□ 0.57
HLA-DQB2-231ENST00000435145 NTSR2O95665 410 aa18.61■□□□□ 0.57
HLA-DQB2-231ENST00000435145 IFNAR1P17181 557 aa18.61■□□□□ 0.57
HLA-DQB2-231ENST00000435145 CCZ1BP86790 482 aa18.61■□□□□ 0.57
HLA-DQB2-231ENST00000435145 CCZ1P86791 482 aaPredicted RBP18.61■□□□□ 0.57
HLA-DQB2-231ENST00000435145 CTDSPL2Q05D32 466 aa18.61■□□□□ 0.57
HLA-DQB2-231ENST00000435145 NCAPHQ15003 741 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms