RNA–Protein interactions for RNA: ENST00000434452.5

DSC3-202, Transcript of desmocollin 3, humanhuman

TSL 5 BASIC

Gene DSC3, Length 6,978 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DSC3-202ENST00000434452 BAG5Q9UL15 447 aa10.36□□□□□ -0.75
DSC3-202ENST00000434452 EIF4E1BA6NMX2 242 aaKnown RBP10.36□□□□□ -0.75
DSC3-202ENST00000434452 FMNL1O95466 1100 aaPredicted RBP10.36□□□□□ -0.75
DSC3-202ENST00000434452 TEX11Q8IYF3 940 aa10.36□□□□□ -0.75
DSC3-202ENST00000434452 TRIM56Q9BRZ2 755 aaKnown RBP10.36□□□□□ -0.75
DSC3-202ENST00000434452 SYCE3A1L190 88 aa10.35□□□□□ -0.75
DSC3-202ENST00000434452 HSPA4P34932 840 aa10.35□□□□□ -0.75
DSC3-202ENST00000434452 KIF11P52732 1056 aa10.35□□□□□ -0.75
DSC3-202ENST00000434452 PRR16Q569H4 304 aa10.35□□□□□ -0.75
DSC3-202ENST00000434452 DCUN1D2Q6PH85 259 aa10.35□□□□□ -0.75
DSC3-202ENST00000434452 MMS19Q96T76 1030 aa10.35□□□□□ -0.75
DSC3-202ENST00000434452 SYNJ2BP-COX16A0A087WUM0 186 aa10.35□□□□□ -0.75
DSC3-202ENST00000434452 IL1RL1Q01638 556 aa10.35□□□□□ -0.75
DSC3-202ENST00000434452 ARHGEF1Q92888 912 aaKnown RBP10.35□□□□□ -0.75
DSC3-202ENST00000434452 MMTAG2Q9BU76 263 aaKnown RBP10.35□□□□□ -0.75
DSC3-202ENST00000434452 COX16Q9P0S2 106 aa10.35□□□□□ -0.75
DSC3-202ENST00000434452 ADAMTS8Q9UP79 889 aa10.35□□□□□ -0.75
DSC3-202ENST00000434452 GSTA1P08263 222 aa10.35□□□□□ -0.75
DSC3-202ENST00000434452 GSTA2P09210 222 aa10.35□□□□□ -0.75
DSC3-202ENST00000434452 PGBD3Q8N328 593 aa10.35□□□□□ -0.75
DSC3-202ENST00000434452 HELBQ8NG08 1087 aaPredicted RBP10.35□□□□□ -0.75
DSC3-202ENST00000434452 LBHD1Q9BQE6 289 aaPredicted RBP10.35□□□□□ -0.75
DSC3-202ENST00000434452 DBF4Q9UBU7 674 aaPredicted RBP10.35□□□□□ -0.75
DSC3-202ENST00000434452 M0R2C6 588 aa10.35□□□□□ -0.75
DSC3-202ENST00000434452 SPOPO43791 374 aa10.35□□□□□ -0.75
DSC3-202ENST00000434452 SH2D4BQ5SQS7 431 aa10.35□□□□□ -0.75
DSC3-202ENST00000434452 NR1H4Q96RI1 486 aaPredicted RBP10.35□□□□□ -0.75
DSC3-202ENST00000434452 TRAIPQ9BWF2 469 aa10.35□□□□□ -0.75
DSC3-202ENST00000434452 ZSCAN32Q9NX65 697 aa10.35□□□□□ -0.75
DSC3-202ENST00000434452 SMARCA2P51531 1590 aa10.35□□□□□ -0.75
DSC3-202ENST00000434452 MX1P20591 662 aa10.35□□□□□ -0.75
DSC3-202ENST00000434452 LIN9Q5TKA1 542 aa10.35□□□□□ -0.75
DSC3-202ENST00000434452 RSRC2Q7L4I2 434 aaKnown RBP10.35□□□□□ -0.75
DSC3-202ENST00000434452 ANKRD24Q8TF21 1146 aa10.35□□□□□ -0.75
DSC3-202ENST00000434452 PRDM5Q9NQX1 630 aaPredicted RBP10.35□□□□□ -0.75
DSC3-202ENST00000434452 K7ELQ4 463 aaPredicted RBP10.34□□□□□ -0.75
DSC3-202ENST00000434452 CYLC1P35663 651 aaPredicted RBP10.34□□□□□ -0.75
DSC3-202ENST00000434452 SEL1L2Q5TEA6 688 aa10.34□□□□□ -0.75
DSC3-202ENST00000434452 CCDC102BQ68D86 513 aa10.34□□□□□ -0.75
DSC3-202ENST00000434452 PGBD1Q96JS3 809 aa10.34□□□□□ -0.75
DSC3-202ENST00000434452 RBM28Q9NW13 759 aaKnown RBP10.34□□□□□ -0.75
DSC3-202ENST00000434452 ANGPTL3Q9Y5C1 460 aa10.34□□□□□ -0.75
DSC3-202ENST00000434452 CCDC61Q9Y6R9 512 aa10.34□□□□□ -0.75
DSC3-202ENST00000434452 ARHGEF35A5YM69 484 aa10.34□□□□□ -0.75
DSC3-202ENST00000434452 PSMA7O14818 248 aa10.34□□□□□ -0.75
DSC3-202ENST00000434452 CIB2O75838 187 aa10.34□□□□□ -0.75
DSC3-202ENST00000434452 AAMPQ13685 434 aa10.34□□□□□ -0.75
DSC3-202ENST00000434452 PPP2R5AQ15172 486 aa10.34□□□□□ -0.75
DSC3-202ENST00000434452 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.34□□□□□ -0.75
DSC3-202ENST00000434452 CALCOCO2Q13137 446 aa10.34□□□□□ -0.75
DSC3-202ENST00000434452 ZFP91Q96JP5 570 aaPredicted RBP10.34□□□□□ -0.75
DSC3-202ENST00000434452 CSRNP2Q9H175 543 aa10.34□□□□□ -0.75
DSC3-202ENST00000434452 MTUS1Q9ULD2 1270 aa10.34□□□□□ -0.75
DSC3-202ENST00000434452 ZBTB43O43298 467 aa10.34□□□□□ -0.75
DSC3-202ENST00000434452 HEXIM1O94992 359 aaKnown RBP10.34□□□□□ -0.75
DSC3-202ENST00000434452 SEC24BO95487 1268 aa10.34□□□□□ -0.75
DSC3-202ENST00000434452 USH1GQ495M9 461 aa10.34□□□□□ -0.75
DSC3-202ENST00000434452 ZNF654Q8IZM8 581 aa10.34□□□□□ -0.75
DSC3-202ENST00000434452 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.34□□□□□ -0.75
DSC3-202ENST00000434452 AS3MTQ9HBK9 375 aa10.34□□□□□ -0.75
DSC3-202ENST00000434452 EXOC7Q9UPT5 735 aa10.34□□□□□ -0.75
DSC3-202ENST00000434452 RABGAP1Q9Y3P9 1069 aa10.34□□□□□ -0.75
DSC3-202ENST00000434452 S100BP04271 92 aaPredicted RBP10.34□□□□□ -0.75
DSC3-202ENST00000434452 SNRPA1P09661 255 aaKnown RBP10.34□□□□□ -0.75
DSC3-202ENST00000434452 P4HA1P13674 534 aa10.34□□□□□ -0.75
DSC3-202ENST00000434452 HSPA2P54652 639 aa10.34□□□□□ -0.75
DSC3-202ENST00000434452 PDCD7Q8N8D1 485 aaKnown RBP10.34□□□□□ -0.75
DSC3-202ENST00000434452 UIMC1Q96RL1 719 aa10.34□□□□□ -0.75
DSC3-202ENST00000434452 ANKRD2Q9GZV1 360 aa10.34□□□□□ -0.75
DSC3-202ENST00000434452 KIF18AQ8NI77 898 aa10.34□□□□□ -0.75
DSC3-202ENST00000434452 ATP2A3Q93084 1043 aa10.34□□□□□ -0.75
DSC3-202ENST00000434452 ANAPC5Q9UJX4 755 aa10.34□□□□□ -0.75
DSC3-202ENST00000434452 PARP1P09874 1014 aaKnown RBP10.33□□□□□ -0.76
DSC3-202ENST00000434452 CASP2P42575 452 aa10.33□□□□□ -0.76
DSC3-202ENST00000434452 PHLDB2Q86SQ0 1253 aa10.33□□□□□ -0.76
DSC3-202ENST00000434452 ADPGKQ9BRR6 497 aa10.33□□□□□ -0.76
DSC3-202ENST00000434452 ZNF277Q9NRM2 450 aaPredicted RBP10.33□□□□□ -0.76
DSC3-202ENST00000434452 SLC52A1Q9NWF4 448 aa10.33□□□□□ -0.76
DSC3-202ENST00000434452 F6X3S4 739 aa10.33□□□□□ -0.76
DSC3-202ENST00000434452 KRT10P13645 584 aa10.33□□□□□ -0.76
DSC3-202ENST00000434452 SCYL2Q6P3W7 929 aa10.33□□□□□ -0.76
DSC3-202ENST00000434452 EHBP1Q8NDI1 1231 aa10.33□□□□□ -0.76
DSC3-202ENST00000434452 NEK11Q8NG66 645 aa10.33□□□□□ -0.76
DSC3-202ENST00000434452 ALKBH8Q96BT7 664 aaKnown RBP10.33□□□□□ -0.76
DSC3-202ENST00000434452 THUMPD2Q9BTF0 503 aaKnown RBP10.33□□□□□ -0.76
DSC3-202ENST00000434452 ZNF18P17022 549 aa10.33□□□□□ -0.76
DSC3-202ENST00000434452 TRIM50Q86XT4 487 aa10.33□□□□□ -0.76
DSC3-202ENST00000434452 RETREG2Q8NC44 543 aa10.33□□□□□ -0.76
DSC3-202ENST00000434452 PPP4R1Q8TF05 950 aa10.33□□□□□ -0.76
DSC3-202ENST00000434452 YIPF2Q9BWQ6 316 aa10.33□□□□□ -0.76
DSC3-202ENST00000434452 SLC13A4Q9UKG4 626 aa10.33□□□□□ -0.76
DSC3-202ENST00000434452 GOLGA8CPA6NN73 597 aa10.33□□□□□ -0.76
DSC3-202ENST00000434452 CETN3O15182 167 aa10.33□□□□□ -0.76
DSC3-202ENST00000434452 NEMP1O14524 444 aa10.33□□□□□ -0.76
DSC3-202ENST00000434452 SCAND2PQ9GZW5 306 aaPredicted RBP10.33□□□□□ -0.76
DSC3-202ENST00000434452 TFIP11Q9UBB9 837 aaKnown RBP10.33□□□□□ -0.76
DSC3-202ENST00000434452 RAD50Q92878 1312 aa10.33□□□□□ -0.76
DSC3-202ENST00000434452 KLF18A0A0U1RQI7 1052 aa10.32□□□□□ -0.76
DSC3-202ENST00000434452 RPL13P26373 211 aaKnown RBP10.32□□□□□ -0.76
DSC3-202ENST00000434452 GGA1Q9UJY5 639 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms