RNA–Protein interactions for RNA: ENST00000433257.5

DDX56-205, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-205ENST00000433257 IFIT1P09914 478 aaKnown RBP17.04■□□□□ 0.32
DDX56-205ENST00000433257 CASP7P55210 303 aa17.04■□□□□ 0.32
DDX56-205ENST00000433257 ETF1P62495 437 aaKnown RBP17.04■□□□□ 0.32
DDX56-205ENST00000433257 COL9A3Q14050 684 aaPredicted RBP17.04■□□□□ 0.32
DDX56-205ENST00000433257 TEX35Q5T0J7 233 aa17.04■□□□□ 0.32
DDX56-205ENST00000433257 FBXO38Q6PIJ6 1188 aa17.04■□□□□ 0.32
DDX56-205ENST00000433257 LRP10Q7Z4F1 713 aa17.04■□□□□ 0.32
DDX56-205ENST00000433257 XPO4Q9C0E2 1151 aaKnown RBP17.04■□□□□ 0.32
DDX56-205ENST00000433257 FAM237AA0A1B0GTK4 181 aa17.04■□□□□ 0.32
DDX56-205ENST00000433257 GOLIM4O00461 696 aa17.04■□□□□ 0.32
DDX56-205ENST00000433257 CPLX1O14810 134 aa17.04■□□□□ 0.32
DDX56-205ENST00000433257 ZNF202O95125 648 aa17.04■□□□□ 0.32
DDX56-205ENST00000433257 TUBB4BP68371 445 aa17.04■□□□□ 0.32
DDX56-205ENST00000433257 CCT2P78371 535 aaKnown RBP17.04■□□□□ 0.32
DDX56-205ENST00000433257 ELF2Q15723 593 aa17.04■□□□□ 0.32
DDX56-205ENST00000433257 ANO1Q5XXA6 986 aa17.04■□□□□ 0.32
DDX56-205ENST00000433257 E4F1Q66K89 784 aaPredicted RBP17.04■□□□□ 0.32
DDX56-205ENST00000433257 NCOA7Q8NI08 942 aa17.04■□□□□ 0.32
DDX56-205ENST00000433257 SEC62Q99442 399 aaKnown RBP17.04■□□□□ 0.32
DDX56-205ENST00000433257 TRMT1Q9NXH9 659 aaKnown RBP17.04■□□□□ 0.32
DDX56-205ENST00000433257 IFNKQ9P0W0 207 aa17.04■□□□□ 0.32
DDX56-205ENST00000433257 TUBE1Q9UJT0 475 aa17.04■□□□□ 0.32
DDX56-205ENST00000433257 RGPD3A6NKT7 1758 aaPredicted RBP17.03■□□□□ 0.32
DDX56-205ENST00000433257 RGPD4Q7Z3J3 1758 aa17.03■□□□□ 0.32
DDX56-205ENST00000433257 MAST3O60307 1309 aa17.03■□□□□ 0.32
DDX56-205ENST00000433257 NDUFA8P51970 172 aa17.03■□□□□ 0.32
DDX56-205ENST00000433257 CCDC158Q5M9N0 1113 aa17.03■□□□□ 0.32
DDX56-205ENST00000433257 OLFM4Q6UX06 510 aa17.03■□□□□ 0.32
DDX56-205ENST00000433257 MPHOSPH8Q99549 860 aa17.03■□□□□ 0.32
DDX56-205ENST00000433257 DACH1Q9UI36 760 aa17.03■□□□□ 0.32
DDX56-205ENST00000433257 DNAI1Q9UI46 699 aa17.03■□□□□ 0.32
DDX56-205ENST00000433257 EYA2O00167 538 aa17.02■□□□□ 0.32
DDX56-205ENST00000433257 DTNBO60941 627 aa17.02■□□□□ 0.32
DDX56-205ENST00000433257 FANCCQ00597 558 aa17.02■□□□□ 0.32
DDX56-205ENST00000433257 MYL5Q02045 173 aa17.02■□□□□ 0.32
DDX56-205ENST00000433257 TMCO3Q6UWJ1 677 aa17.02■□□□□ 0.32
DDX56-205ENST00000433257 RALYLQ86SE5 291 aaKnown RBP17.02■□□□□ 0.32
DDX56-205ENST00000433257 HOMER1Q86YM7 354 aa17.02■□□□□ 0.32
DDX56-205ENST00000433257 MNS1Q8NEH6 495 aa17.02■□□□□ 0.32
DDX56-205ENST00000433257 UBXN4Q92575 508 aa17.02■□□□□ 0.32
DDX56-205ENST00000433257 LRRC2Q9BYS8 371 aa17.02■□□□□ 0.32
DDX56-205ENST00000433257 CWC25Q9NXE8 425 aaPredicted RBP17.02■□□□□ 0.32
DDX56-205ENST00000433257 STK32BQ9NY57 414 aa17.02■□□□□ 0.32
DDX56-205ENST00000433257 NAP1L2Q9ULW6 460 aaPredicted RBP17.02■□□□□ 0.32
DDX56-205ENST00000433257 A0A1B0GVL5 298 aa17.01■□□□□ 0.31
DDX56-205ENST00000433257 EFCAB8A8MWE9 144 aa17.01■□□□□ 0.31
DDX56-205ENST00000433257 ARID5BQ14865 1188 aa17.01■□□□□ 0.31
DDX56-205ENST00000433257 SLC39A14Q15043 492 aa17.01■□□□□ 0.31
DDX56-205ENST00000433257 LMBR1LQ6UX01 489 aa17.01■□□□□ 0.31
DDX56-205ENST00000433257 ZNF496Q96IT1 587 aaPredicted RBP17.01■□□□□ 0.31
DDX56-205ENST00000433257 NEUROD6Q96NK8 337 aa17.01■□□□□ 0.31
DDX56-205ENST00000433257 ORC3Q9UBD5 711 aaPredicted RBP17.01■□□□□ 0.31
DDX56-205ENST00000433257 ARHGAP6O43182 974 aa17.01■□□□□ 0.31
DDX56-205ENST00000433257 FDPSP14324 419 aaKnown RBP17.01■□□□□ 0.31
DDX56-205ENST00000433257 DPCR1Q3MIW9 517 aa17.01■□□□□ 0.31
DDX56-205ENST00000433257 CT47A1Q5JQC4 288 aaPredicted RBP17.01■□□□□ 0.31
DDX56-205ENST00000433257 JAKMIP3Q5VZ66 844 aa17.01■□□□□ 0.31
DDX56-205ENST00000433257 ARMCX5Q6P1M9 558 aa17.01■□□□□ 0.31
DDX56-205ENST00000433257 CCDC191Q8NCU4 936 aa17.01■□□□□ 0.31
DDX56-205ENST00000433257 TEX13AQ9BXU3 409 aaPredicted RBP17.01■□□□□ 0.31
DDX56-205ENST00000433257 TSPYL1Q9H0U9 437 aa17.01■□□□□ 0.31
DDX56-205ENST00000433257 NUP188Q5SRE5 1749 aa17■□□□□ 0.31
DDX56-205ENST00000433257 SYKP43405 635 aa17■□□□□ 0.31
DDX56-205ENST00000433257 FOXO4P98177 505 aa17■□□□□ 0.31
DDX56-205ENST00000433257 SYT10Q6XYQ8 523 aa17■□□□□ 0.31
DDX56-205ENST00000433257 ATG9AQ7Z3C6 839 aa17■□□□□ 0.31
DDX56-205ENST00000433257 SLC4A9Q96Q91 983 aa17■□□□□ 0.31
DDX56-205ENST00000433257 LY75O60449 1722 aa17■□□□□ 0.31
DDX56-205ENST00000433257 GOLGA8BA8MQT2 603 aa16.99■□□□□ 0.31
DDX56-205ENST00000433257 PRC1O43663 620 aa16.99■□□□□ 0.31
DDX56-205ENST00000433257 PFKFB1P16118 471 aa16.99■□□□□ 0.31
DDX56-205ENST00000433257 KIF23Q02241 960 aaPredicted RBP16.99■□□□□ 0.31
DDX56-205ENST00000433257 TRDNQ13061 729 aa16.99■□□□□ 0.31
DDX56-205ENST00000433257 ITPK1Q13572 414 aa16.99■□□□□ 0.31
DDX56-205ENST00000433257 NCAPHQ15003 741 aa16.99■□□□□ 0.31
DDX56-205ENST00000433257 SLC15A2Q16348 729 aa16.99■□□□□ 0.31
DDX56-205ENST00000433257 CCDC34Q96HJ3 373 aa16.99■□□□□ 0.31
DDX56-205ENST00000433257 FTOQ9C0B1 505 aaKnown RBP eCLIP16.99■□□□□ 0.31
DDX56-205ENST00000433257 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.99■□□□□ 0.312e-6■■■□□ 16
DDX56-205ENST00000433257 TMX1Q9H3N1 280 aa16.99■□□□□ 0.31
DDX56-205ENST00000433257 V9GYY5 206 aaPredicted RBP16.99■□□□□ 0.31
DDX56-205ENST00000433257 KLF18A0A0U1RQI7 1052 aa16.98■□□□□ 0.31
DDX56-205ENST00000433257 CUTAO60888 179 aa16.98■□□□□ 0.31
DDX56-205ENST00000433257 UBASH3AP57075 661 aa16.98■□□□□ 0.31
DDX56-205ENST00000433257 TUBB2AQ13885 445 aa16.98■□□□□ 0.31
DDX56-205ENST00000433257 MB21D2Q8IYB1 491 aaPredicted RBP16.98■□□□□ 0.31
DDX56-205ENST00000433257 WASF1Q92558 559 aa16.98■□□□□ 0.31
DDX56-205ENST00000433257 APPBP2Q92624 585 aa16.98■□□□□ 0.31
DDX56-205ENST00000433257 AK7Q96M32 723 aa16.98■□□□□ 0.31
DDX56-205ENST00000433257 TUBB2BQ9BVA1 445 aa16.98■□□□□ 0.31
DDX56-205ENST00000433257 NCOA5Q9HCD5 579 aaKnown RBP16.98■□□□□ 0.31
DDX56-205ENST00000433257 TFCP2L1Q9NZI6 479 aa16.98■□□□□ 0.31
DDX56-205ENST00000433257 CEP126Q9P2H0 1117 aa16.98■□□□□ 0.31
DDX56-205ENST00000433257 CLIC4Q9Y696 253 aa16.98■□□□□ 0.31
DDX56-205ENST00000433257 C4AP0C0L4 1744 aa16.98■□□□□ 0.31
DDX56-205ENST00000433257 C4BP0C0L5 1744 aa16.98■□□□□ 0.31
DDX56-205ENST00000433257 ZMYM6O95789 1325 aa16.98■□□□□ 0.31
DDX56-205ENST00000433257 STARD3NLO95772 234 aa16.97■□□□□ 0.31
DDX56-205ENST00000433257 SERPINC1P01008 464 aa16.97■□□□□ 0.31
DDX56-205ENST00000433257 TOP1P11387 765 aaKnown RBP16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms