RNA–Protein interactions for RNA: ENST00000433224.1

LRRTM1-206, Transcript of leucine rich repeat transmembrane neuronal 1, humanhuman

TSL 1 (best)

Gene LRRTM1, Length 4,023 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1-206ENST00000433224 MAST3O60307 1309 aa14.34□□□□□ -0.11
LRRTM1-206ENST00000433224 CHMP4BP1P59074 171 aa14.34□□□□□ -0.11
LRRTM1-206ENST00000433224 UBXN4Q92575 508 aa14.34□□□□□ -0.11
LRRTM1-206ENST00000433224 UBA5Q9GZZ9 404 aa14.34□□□□□ -0.11
LRRTM1-206ENST00000433224 MAGEC2Q9UBF1 373 aaPredicted RBP14.34□□□□□ -0.11
LRRTM1-206ENST00000433224 DYNLL1P63167 89 aaKnown RBP14.34□□□□□ -0.11
LRRTM1-206ENST00000433224 CEP131Q9UPN4 1083 aa14.34□□□□□ -0.11
LRRTM1-206ENST00000433224 URI1O94763 535 aaPredicted RBP14.34□□□□□ -0.11
LRRTM1-206ENST00000433224 UBA7P41226 1012 aa14.34□□□□□ -0.11
LRRTM1-206ENST00000433224 ZYXQ15942 572 aaKnown RBP14.34□□□□□ -0.11
LRRTM1-206ENST00000433224 CEP135Q66GS9 1140 aa14.34□□□□□ -0.11
LRRTM1-206ENST00000433224 POLR3GO15318 223 aaPredicted RBP14.33□□□□□ -0.11
LRRTM1-206ENST00000433224 CYP19A1P11511 503 aaPredicted RBP14.33□□□□□ -0.11
LRRTM1-206ENST00000433224 SCARF1Q14162 830 aa14.33□□□□□ -0.11
LRRTM1-206ENST00000433224 MRPS27Q92552 414 aaKnown RBP14.33□□□□□ -0.11
LRRTM1-206ENST00000433224 IL25Q9H293 177 aa14.33□□□□□ -0.11
LRRTM1-206ENST00000433224 RIOK3O14730 519 aaKnown RBP14.33□□□□□ -0.12
LRRTM1-206ENST00000433224 LMOD1P29536 600 aaPredicted RBP14.33□□□□□ -0.12
LRRTM1-206ENST00000433224 GSTO1P78417 241 aa14.33□□□□□ -0.12
LRRTM1-206ENST00000433224 MFSD14BQ5SR56 506 aa14.33□□□□□ -0.12
LRRTM1-206ENST00000433224 DPP8Q6V1X1 898 aaPredicted RBP14.33□□□□□ -0.12
LRRTM1-206ENST00000433224 OGFOD1Q8N543 542 aa14.33□□□□□ -0.12
LRRTM1-206ENST00000433224 DHX58Q96C10 678 aa14.33□□□□□ -0.12
LRRTM1-206ENST00000433224 ZNF500O60304 480 aaPredicted RBP14.33□□□□□ -0.12
LRRTM1-206ENST00000433224 SKILP12757 684 aa14.33□□□□□ -0.12
LRRTM1-206ENST00000433224 PDIA4P13667 645 aaKnown RBP14.33□□□□□ -0.12
LRRTM1-206ENST00000433224 MCM7P33993 719 aa14.33□□□□□ -0.12
LRRTM1-206ENST00000433224 TMC6Q7Z403 805 aa14.33□□□□□ -0.12
LRRTM1-206ENST00000433224 IFNL3Q8IZI9 196 aa14.33□□□□□ -0.12
LRRTM1-206ENST00000433224 ZSWIM6Q9HCJ5 1215 aa14.33□□□□□ -0.12
LRRTM1-206ENST00000433224 GPCPD1Q9NPB8 672 aa14.33□□□□□ -0.12
LRRTM1-206ENST00000433224 GNAT2P19087 354 aa14.32□□□□□ -0.12
LRRTM1-206ENST00000433224 U2AF2P26368 475 aaKnown RBP eCLIP14.32□□□□□ -0.12
LRRTM1-206ENST00000433224 ZNF174Q15697 407 aa14.32□□□□□ -0.12
LRRTM1-206ENST00000433224 RBM17Q96I25 401 aaKnown RBP14.32□□□□□ -0.12
LRRTM1-206ENST00000433224 DLC1Q96QB1 1528 aa14.32□□□□□ -0.12
LRRTM1-206ENST00000433224 SPATA31D1Q6ZQQ2 1576 aa14.32□□□□□ -0.12
LRRTM1-206ENST00000433224 NAPAP54920 295 aa14.32□□□□□ -0.12
LRRTM1-206ENST00000433224 PPFIBP1Q86W92 1011 aa14.32□□□□□ -0.12
LRRTM1-206ENST00000433224 KIAA0825Q8IV33 1275 aa14.32□□□□□ -0.12
LRRTM1-206ENST00000433224 FTOQ9C0B1 505 aaKnown RBP eCLIP14.32□□□□□ -0.12
LRRTM1-206ENST00000433224 GJB4Q9NTQ9 266 aa14.32□□□□□ -0.12
LRRTM1-206ENST00000433224 TRPC5Q9UL62 973 aaPredicted RBP14.32□□□□□ -0.12
LRRTM1-206ENST00000433224 STX17P56962 302 aa14.32□□□□□ -0.12
LRRTM1-206ENST00000433224 TMTC2Q8N394 836 aa14.32□□□□□ -0.12
LRRTM1-206ENST00000433224 MYRIPQ8NFW9 859 aa14.32□□□□□ -0.12
LRRTM1-206ENST00000433224 STAMQ92783 540 aa14.31□□□□□ -0.12
LRRTM1-206ENST00000433224 KIF2CQ99661 725 aa14.31□□□□□ -0.12
LRRTM1-206ENST00000433224 PIH1D3Q9NQM4 214 aaKnown RBP14.31□□□□□ -0.12
LRRTM1-206ENST00000433224 TECPR2O15040 1411 aa14.31□□□□□ -0.12
LRRTM1-206ENST00000433224 A0A087WWV3 80 aa14.31□□□□□ -0.12
LRRTM1-206ENST00000433224 MCAMP43121 646 aa14.31□□□□□ -0.12
LRRTM1-206ENST00000433224 RASGRF1Q13972 1273 aa14.31□□□□□ -0.12
LRRTM1-206ENST00000433224 TTLL12Q14166 644 aaPredicted RBP14.31□□□□□ -0.12
LRRTM1-206ENST00000433224 AOPEPQ8N6M6 819 aa14.31□□□□□ -0.12
LRRTM1-206ENST00000433224 MARCH10Q8NA82 808 aaPredicted RBP14.31□□□□□ -0.12
LRRTM1-206ENST00000433224 DEPDC5O75140 1603 aa14.31□□□□□ -0.12
LRRTM1-206ENST00000433224 TFAP4Q01664 338 aa14.31□□□□□ -0.12
LRRTM1-206ENST00000433224 PDIA6Q15084 440 aa14.31□□□□□ -0.12
LRRTM1-206ENST00000433224 DIXDC1Q155Q3 683 aa14.31□□□□□ -0.12
LRRTM1-206ENST00000433224 HSP90B2PQ58FF3 399 aa14.31□□□□□ -0.12
LRRTM1-206ENST00000433224 DIS3L2Q8IYB7 885 aaKnown RBP14.31□□□□□ -0.12
LRRTM1-206ENST00000433224 CELF1Q92879 486 aaKnown RBP14.31□□□□□ -0.12
LRRTM1-206ENST00000433224 VPS54Q9P1Q0 977 aa14.31□□□□□ -0.12
LRRTM1-206ENST00000433224 NRKQ7Z2Y5 1582 aa14.3□□□□□ -0.12
LRRTM1-206ENST00000433224 KDM4FA0A1W2PPD8 638 aa14.3□□□□□ -0.12
LRRTM1-206ENST00000433224 TNNI2P48788 182 aa14.3□□□□□ -0.12
LRRTM1-206ENST00000433224 STIM1Q13586 685 aa14.3□□□□□ -0.12
LRRTM1-206ENST00000433224 ZMYM1Q5SVZ6 1142 aa14.3□□□□□ -0.12
LRRTM1-206ENST00000433224 AKNAD1Q5T1N1 836 aa14.3□□□□□ -0.12
LRRTM1-206ENST00000433224 DSCC1Q9BVC3 393 aa14.3□□□□□ -0.12
LRRTM1-206ENST00000433224 PPLO60437 1756 aa14.3□□□□□ -0.12
LRRTM1-206ENST00000433224 IBSPP21815 317 aaPredicted RBP14.3□□□□□ -0.12
LRRTM1-206ENST00000433224 MTMR6Q9Y217 621 aa14.3□□□□□ -0.12
LRRTM1-206ENST00000433224 AFF2P51816 1311 aa14.3□□□□□ -0.12
LRRTM1-206ENST00000433224 IQSEC2Q5JU85 1478 aa14.3□□□□□ -0.12
LRRTM1-206ENST00000433224 TRIM75PA6NK02 468 aa14.3□□□□□ -0.12
LRRTM1-206ENST00000433224 STX1AQ16623 288 aa14.3□□□□□ -0.12
LRRTM1-206ENST00000433224 GTF3C6Q969F1 213 aa14.3□□□□□ -0.12
LRRTM1-206ENST00000433224 RIMS1Q86UR5 1692 aaKnown RBP14.29□□□□□ -0.12
LRRTM1-206ENST00000433224 SCRN1Q12765 414 aa14.29□□□□□ -0.12
LRRTM1-206ENST00000433224 KCNG4Q8TDN1 519 aa14.29□□□□□ -0.12
LRRTM1-206ENST00000433224 LEO1Q8WVC0 666 aaPredicted RBP14.29□□□□□ -0.12
LRRTM1-206ENST00000433224 CEP89Q96ST8 783 aa14.29□□□□□ -0.12
LRRTM1-206ENST00000433224 PATL2C9JE40 543 aaKnown RBP14.29□□□□□ -0.12
LRRTM1-206ENST00000433224 SERPINB2P05120 415 aa14.29□□□□□ -0.12
LRRTM1-206ENST00000433224 GOLGA8HP0CJ92 632 aa14.29□□□□□ -0.12
LRRTM1-206ENST00000433224 AIFM3Q96NN9 605 aa14.29□□□□□ -0.12
LRRTM1-206ENST00000433224 TM6SF1Q9BZW5 370 aa14.29□□□□□ -0.12
LRRTM1-206ENST00000433224 GJA3Q9Y6H8 435 aa14.29□□□□□ -0.12
LRRTM1-206ENST00000433224 VWA3AA6NCI4 1184 aa14.29□□□□□ -0.12
LRRTM1-206ENST00000433224 LIG1P18858 919 aa14.29□□□□□ -0.12
LRRTM1-206ENST00000433224 TBC1D9BQ66K14 1250 aa14.29□□□□□ -0.12
LRRTM1-206ENST00000433224 KRT40Q6A162 431 aa14.29□□□□□ -0.12
LRRTM1-206ENST00000433224 LCORLQ8N3X6 602 aa14.29□□□□□ -0.12
LRRTM1-206ENST00000433224 BMP2KQ9NSY1 1161 aaPredicted RBP14.29□□□□□ -0.12
LRRTM1-206ENST00000433224 MAP2P11137 1827 aaKnown RBP14.29□□□□□ -0.12
LRRTM1-206ENST00000433224 ZNF804BA4D1E1 1349 aa14.28□□□□□ -0.12
LRRTM1-206ENST00000433224 EIF5P55010 431 aaKnown RBP14.28□□□□□ -0.12
LRRTM1-206ENST00000433224 PPARAQ07869 468 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms