RNA–Protein interactions for RNA: ENST00000432954.1

CCDC171-202, Transcript of coiled-coil domain containing 171, humanhuman

TSL 2

Gene CCDC171, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-202ENST00000432954 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.35□□□□□ -0.43
CCDC171-202ENST00000432954 ENOX1Q8TC92 643 aaKnown RBP12.35□□□□□ -0.43
CCDC171-202ENST00000432954 PPP2R3CQ969Q6 453 aa12.35□□□□□ -0.43
CCDC171-202ENST00000432954 CLIC6Q96NY7 704 aa12.35□□□□□ -0.43
CCDC171-202ENST00000432954 SPOCK3Q9BQ16 436 aa12.35□□□□□ -0.43
CCDC171-202ENST00000432954 HELLSQ9NRZ9 838 aa12.35□□□□□ -0.43
CCDC171-202ENST00000432954 PDS5BQ9NTI5 1447 aa12.35□□□□□ -0.43
CCDC171-202ENST00000432954 CCDC151A5D8V7 595 aa12.35□□□□□ -0.43
CCDC171-202ENST00000432954 LINGO3P0C6S8 592 aa12.35□□□□□ -0.43
CCDC171-202ENST00000432954 MCM2P49736 904 aa12.35□□□□□ -0.43
CCDC171-202ENST00000432954 OXCT1P55809 520 aa12.35□□□□□ -0.43
CCDC171-202ENST00000432954 CTAG1AP78358 180 aa12.35□□□□□ -0.43
CCDC171-202ENST00000432954 GUCY1B3Q02153 619 aa12.35□□□□□ -0.43
CCDC171-202ENST00000432954 ACTN3Q08043 901 aaPredicted RBP12.35□□□□□ -0.43
CCDC171-202ENST00000432954 CBX3Q13185 183 aa12.35□□□□□ -0.43
CCDC171-202ENST00000432954 ARHGEF6Q15052 776 aa12.35□□□□□ -0.43
CCDC171-202ENST00000432954 BRD3Q15059 726 aa12.35□□□□□ -0.43
CCDC171-202ENST00000432954 CEP57Q86XR8 500 aa12.35□□□□□ -0.43
CCDC171-202ENST00000432954 HNRNPLLQ8WVV9 542 aaKnown RBP12.35□□□□□ -0.43
CCDC171-202ENST00000432954 MAML3Q96JK9 1138 aa12.35□□□□□ -0.43
CCDC171-202ENST00000432954 CENPOQ9BU64 300 aa12.35□□□□□ -0.43
CCDC171-202ENST00000432954 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.35□□□□□ -0.43
CCDC171-202ENST00000432954 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.35□□□□□ -0.43
CCDC171-202ENST00000432954 ZDHHC9Q9Y397 364 aa12.35□□□□□ -0.43
CCDC171-202ENST00000432954 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.34□□□□□ -0.43
CCDC171-202ENST00000432954 PRDM15P57071 1507 aaPredicted RBP12.34□□□□□ -0.43
CCDC171-202ENST00000432954 ZSCAN12O43309 604 aa12.34□□□□□ -0.43
CCDC171-202ENST00000432954 CCDC152Q4G0S7 254 aa12.34□□□□□ -0.43
CCDC171-202ENST00000432954 LMNTD2Q8IXW0 634 aa12.34□□□□□ -0.43
CCDC171-202ENST00000432954 LRRN4CLQ8ND94 238 aa12.34□□□□□ -0.43
CCDC171-202ENST00000432954 SENP7Q9BQF6 1050 aa12.34□□□□□ -0.43
CCDC171-202ENST00000432954 FANCD2Q9BXW9 1451 aa12.34□□□□□ -0.43
CCDC171-202ENST00000432954 TBKBP1A7MCY6 615 aa12.33□□□□□ -0.44
CCDC171-202ENST00000432954 MGRN1O60291 552 aa12.33□□□□□ -0.44
CCDC171-202ENST00000432954 RPL17P18621 184 aaKnown RBP12.33□□□□□ -0.44
CCDC171-202ENST00000432954 GNAQP50148 359 aa12.33□□□□□ -0.44
CCDC171-202ENST00000432954 LONRF2Q1L5Z9 754 aa12.33□□□□□ -0.44
CCDC171-202ENST00000432954 NUTM2DQ5VT03 806 aaPredicted RBP12.33□□□□□ -0.44
CCDC171-202ENST00000432954 C11orf96Q7Z7L8 435 aa12.33□□□□□ -0.44
CCDC171-202ENST00000432954 SREK1Q8WXA9 508 aaKnown RBP12.33□□□□□ -0.44
CCDC171-202ENST00000432954 IWS1Q96ST2 819 aa12.33□□□□□ -0.44
CCDC171-202ENST00000432954 TANGO6Q9C0B7 1094 aa12.33□□□□□ -0.44
CCDC171-202ENST00000432954 ATXN10Q9UBB4 475 aa12.33□□□□□ -0.44
CCDC171-202ENST00000432954 MYO1AQ9UBC5 1043 aa12.33□□□□□ -0.44
CCDC171-202ENST00000432954 TMCO1Q9UM00 188 aa12.33□□□□□ -0.44
CCDC171-202ENST00000432954 ANKRD30BQ9BXX2 1392 aa12.33□□□□□ -0.44
CCDC171-202ENST00000432954 RUSC2Q8N2Y8 1516 aa12.33□□□□□ -0.44
CCDC171-202ENST00000432954 HFM1A2PYH4 1435 aa12.33□□□□□ -0.44
CCDC171-202ENST00000432954 P4HA2O15460 535 aa12.33□□□□□ -0.44
CCDC171-202ENST00000432954 CDC25BP30305 580 aa12.33□□□□□ -0.44
CCDC171-202ENST00000432954 AGAP9Q5VTM2 703 aa12.33□□□□□ -0.44
CCDC171-202ENST00000432954 NAA16Q6N069 864 aaPredicted RBP12.33□□□□□ -0.44
CCDC171-202ENST00000432954 NEK10Q6ZWH5 1172 aa12.33□□□□□ -0.44
CCDC171-202ENST00000432954 CCAR2Q8N163 923 aaKnown RBP12.33□□□□□ -0.44
CCDC171-202ENST00000432954 PLEKHA4Q9H4M7 779 aa12.33□□□□□ -0.44
CCDC171-202ENST00000432954 PDE11AQ9HCR9 933 aa12.33□□□□□ -0.44
CCDC171-202ENST00000432954 GALNT8Q9NY28 637 aa12.33□□□□□ -0.44
CCDC171-202ENST00000432954 AATFQ9NY61 560 aaKnown RBP eCLIP12.33□□□□□ -0.44
CCDC171-202ENST00000432954 EPRSP07814 1512 aaKnown RBP12.33□□□□□ -0.44
CCDC171-202ENST00000432954 A0A1B0GVG6 124 aa12.32□□□□□ -0.44
CCDC171-202ENST00000432954 LSM1O15116 133 aaKnown RBP12.32□□□□□ -0.44
CCDC171-202ENST00000432954 FGFR1OPO95684 399 aaKnown RBP12.32□□□□□ -0.44
CCDC171-202ENST00000432954 MX1P20591 662 aa12.32□□□□□ -0.44
CCDC171-202ENST00000432954 MATR3P43243 847 aaKnown RBP eCLIP12.32□□□□□ -0.44
CCDC171-202ENST00000432954 IFFO1Q0D2I5 559 aa12.32□□□□□ -0.44
CCDC171-202ENST00000432954 USH1GQ495M9 461 aa12.32□□□□□ -0.44
CCDC171-202ENST00000432954 CCDC40Q4G0X9 1142 aa12.32□□□□□ -0.44
CCDC171-202ENST00000432954 COBLL1Q53SF7 1204 aa12.32□□□□□ -0.44
CCDC171-202ENST00000432954 HDXQ7Z353 690 aa12.32□□□□□ -0.44
CCDC171-202ENST00000432954 CACTINQ8WUQ7 758 aaKnown RBP12.32□□□□□ -0.44
CCDC171-202ENST00000432954 GCC1Q96CN9 775 aa12.32□□□□□ -0.44
CCDC171-202ENST00000432954 SYNCQ9H7C4 482 aa12.32□□□□□ -0.44
CCDC171-202ENST00000432954 VCPKMTQ9H867 229 aa12.32□□□□□ -0.44
CCDC171-202ENST00000432954 IKBKGQ9Y6K9 419 aa12.32□□□□□ -0.44
CCDC171-202ENST00000432954 TTC41PQ6P2S7 1318 aa12.32□□□□□ -0.44
CCDC171-202ENST00000432954 DNMBPQ6XZF7 1577 aa12.32□□□□□ -0.44
CCDC171-202ENST00000432954 CUX1P39880 1505 aa12.32□□□□□ -0.44
CCDC171-202ENST00000432954 CLASP1Q7Z460 1538 aa12.32□□□□□ -0.44
CCDC171-202ENST00000432954 SART1O43290 800 aaKnown RBP12.32□□□□□ -0.44
CCDC171-202ENST00000432954 CCDC166P0CW27 439 aa12.32□□□□□ -0.44
CCDC171-202ENST00000432954 BLMHQ13867 455 aa12.32□□□□□ -0.44
CCDC171-202ENST00000432954 SPDYCQ5MJ68 293 aa12.32□□□□□ -0.44
CCDC171-202ENST00000432954 ZNF662Q6ZS27 426 aa12.32□□□□□ -0.44
CCDC171-202ENST00000432954 B4GALNT4Q76KP1 1039 aa12.32□□□□□ -0.44
CCDC171-202ENST00000432954 KLHDC4Q8TBB5 520 aa12.32□□□□□ -0.44
CCDC171-202ENST00000432954 SMARCC1Q92922 1105 aaPredicted RBP12.32□□□□□ -0.44
CCDC171-202ENST00000432954 HVCN1Q96D96 273 aa12.32□□□□□ -0.44
CCDC171-202ENST00000432954 MRPL46Q9H2W6 279 aaKnown RBP12.32□□□□□ -0.44
CCDC171-202ENST00000432954 EBF2Q9HAK2 575 aa12.32□□□□□ -0.44
CCDC171-202ENST00000432954 PRELID1Q9Y255 219 aa12.32□□□□□ -0.44
CCDC171-202ENST00000432954 USP27XA6NNY8 438 aa12.31□□□□□ -0.44
CCDC171-202ENST00000432954 GFPT2O94808 682 aa12.31□□□□□ -0.44
CCDC171-202ENST00000432954 CCT5P48643 541 aa12.31□□□□□ -0.44
CCDC171-202ENST00000432954 MKRN4PQ13434 485 aaPredicted RBP12.31□□□□□ -0.44
CCDC171-202ENST00000432954 PKP1Q13835 747 aa12.31□□□□□ -0.44
CCDC171-202ENST00000432954 ALDH1L2Q3SY69 923 aa12.31□□□□□ -0.44
CCDC171-202ENST00000432954 NBPF14Q5TI25 921 aa12.31□□□□□ -0.44
CCDC171-202ENST00000432954 FAM228AQ86W67 206 aa12.31□□□□□ -0.44
CCDC171-202ENST00000432954 PLA2G4DQ86XP0 818 aa12.31□□□□□ -0.44
CCDC171-202ENST00000432954 PLPP6Q8IY26 295 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms