RNA–Protein interactions for RNA: ENST00000432425.5

CLK1-204, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-204ENST00000432425 FRMD6Q96NE9 622 aa6.14□□□□□ -1.43
CLK1-204ENST00000432425 WDR18Q9BV38 432 aa6.14□□□□□ -1.43
CLK1-204ENST00000432425 C12orf49Q9H741 205 aa6.14□□□□□ -1.43
CLK1-204ENST00000432425 PPM1HQ9ULR3 514 aa6.14□□□□□ -1.43
CLK1-204ENST00000432425 ACTL7BQ9Y614 415 aa6.14□□□□□ -1.43
CLK1-204ENST00000432425 FAM95CA0A1B0GW59 222 aa6.14□□□□□ -1.43
CLK1-204ENST00000432425 LIG1P18858 919 aa6.14□□□□□ -1.43
CLK1-204ENST00000432425 RAB6AP20340 208 aa6.14□□□□□ -1.43
CLK1-204ENST00000432425 EAPPQ56P03 285 aaPredicted RBP6.14□□□□□ -1.43
CLK1-204ENST00000432425 ARTNQ5T4W7 220 aa6.14□□□□□ -1.43
CLK1-204ENST00000432425 CDPF1Q6NVV7 123 aa6.14□□□□□ -1.43
CLK1-204ENST00000432425 TPTE2Q6XPS3 522 aa6.14□□□□□ -1.43
CLK1-204ENST00000432425 SULF2Q8IWU5 870 aa6.14□□□□□ -1.43
CLK1-204ENST00000432425 GIMAP7Q8NHV1 300 aa6.14□□□□□ -1.43
CLK1-204ENST00000432425 KCNB2Q92953 911 aa6.14□□□□□ -1.43
CLK1-204ENST00000432425 EMILIN2Q9BXX0 1053 aa6.14□□□□□ -1.43
CLK1-204ENST00000432425 CEP44Q9C0F1 390 aa6.14□□□□□ -1.43
CLK1-204ENST00000432425 CCDC86Q9H6F5 360 aaKnown RBP6.14□□□□□ -1.43
CLK1-204ENST00000432425 ZFP64Q9NPA5 681 aa6.14□□□□□ -1.43
CLK1-204ENST00000432425 KRT82Q9NSB4 513 aa6.14□□□□□ -1.43
CLK1-204ENST00000432425 FAM8A1Q9UBU6 413 aa6.14□□□□□ -1.43
CLK1-204ENST00000432425 PRPF40AO75400 957 aaKnown RBP6.13□□□□□ -1.43
CLK1-204ENST00000432425 SLFN14P0C7P3 912 aa6.13□□□□□ -1.43
CLK1-204ENST00000432425 NME2P22392 152 aa6.13□□□□□ -1.43
CLK1-204ENST00000432425 SAMM50Q9Y512 469 aa6.13□□□□□ -1.43
CLK1-204ENST00000432425 SYNGAP1Q96PV0 1343 aa6.12□□□□□ -1.43
CLK1-204ENST00000432425 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.12□□□□□ -1.43
CLK1-204ENST00000432425 USP17L7P0C7H9 530 aa6.12□□□□□ -1.43
CLK1-204ENST00000432425 EIF4BP23588 611 aaKnown RBP6.12□□□□□ -1.43
CLK1-204ENST00000432425 ARNTP27540 789 aa6.12□□□□□ -1.43
CLK1-204ENST00000432425 ASPAP45381 313 aa6.12□□□□□ -1.43
CLK1-204ENST00000432425 MAP7Q14244 749 aa6.12□□□□□ -1.43
CLK1-204ENST00000432425 ZDHHC13Q8IUH4 622 aa6.12□□□□□ -1.43
CLK1-204ENST00000432425 MFSD14AQ96MC6 490 aa6.12□□□□□ -1.43
CLK1-204ENST00000432425 NECAB3Q96P71 396 aaPredicted RBP6.12□□□□□ -1.43
CLK1-204ENST00000432425 GZF1Q9H116 711 aaPredicted RBP6.12□□□□□ -1.43
CLK1-204ENST00000432425 CBX8Q9HC52 389 aa6.12□□□□□ -1.43
CLK1-204ENST00000432425 GNA15P30679 374 aa6.11□□□□□ -1.43
CLK1-204ENST00000432425 SHKBP1Q8TBC3 707 aa6.11□□□□□ -1.43
CLK1-204ENST00000432425 KRTAP4-12Q9BQ66 201 aa6.11□□□□□ -1.43
CLK1-204ENST00000432425 ATG3Q9NT62 314 aa6.11□□□□□ -1.43
CLK1-204ENST00000432425 FAM105AQ9NUU6 356 aa6.11□□□□□ -1.43
CLK1-204ENST00000432425 WDR64B1ANS9 1081 aa6.1□□□□□ -1.43
CLK1-204ENST00000432425 TMPRSS2O15393 492 aa6.1□□□□□ -1.43
CLK1-204ENST00000432425 ZNF862O60290 1169 aa6.1□□□□□ -1.43
CLK1-204ENST00000432425 FBXO24O75426 580 aa6.1□□□□□ -1.43
CLK1-204ENST00000432425 TGFB1P01137 390 aa6.1□□□□□ -1.43
CLK1-204ENST00000432425 GRIK1P39086 918 aa6.1□□□□□ -1.43
CLK1-204ENST00000432425 ID3Q02535 119 aa6.1□□□□□ -1.43
CLK1-204ENST00000432425 KIF4BQ2VIQ3 1234 aa6.1□□□□□ -1.43
CLK1-204ENST00000432425 PDZD3Q86UT5 571 aa6.1□□□□□ -1.43
CLK1-204ENST00000432425 FBXL6Q8N531 539 aa6.1□□□□□ -1.43
CLK1-204ENST00000432425 STK35Q8TDR2 534 aa6.1□□□□□ -1.43
CLK1-204ENST00000432425 EZH1Q92800 747 aaPredicted RBP6.1□□□□□ -1.43
CLK1-204ENST00000432425 WDR89Q96FK6 387 aaPredicted RBP6.1□□□□□ -1.43
CLK1-204ENST00000432425 ATXN3LQ9H3M9 355 aa6.1□□□□□ -1.43
CLK1-204ENST00000432425 PIDD1Q9HB75 910 aa6.1□□□□□ -1.43
CLK1-204ENST00000432425 TTF2Q9UNY4 1162 aaKnown RBP6.1□□□□□ -1.43
CLK1-204ENST00000432425 HYAL3O43820 417 aaPredicted RBP6.1□□□□□ -1.43
CLK1-204ENST00000432425 COBLO75128 1261 aa6.1□□□□□ -1.43
CLK1-204ENST00000432425 NFICP08651 508 aa6.1□□□□□ -1.43
CLK1-204ENST00000432425 SSTR4P31391 388 aa6.1□□□□□ -1.43
CLK1-204ENST00000432425 CCDC27Q2M243 656 aa6.1□□□□□ -1.43
CLK1-204ENST00000432425 MAP1SQ66K74 1059 aaPredicted RBP6.1□□□□□ -1.43
CLK1-204ENST00000432425 NBPF11Q86T75 865 aa6.1□□□□□ -1.43
CLK1-204ENST00000432425 NPAS4Q8IUM7 802 aa6.1□□□□□ -1.43
CLK1-204ENST00000432425 ANKRD24Q8TF21 1146 aa6.1□□□□□ -1.43
CLK1-204ENST00000432425 ACSBG1Q96GR2 724 aa6.1□□□□□ -1.43
CLK1-204ENST00000432425 TBC1D32Q96NH3 1257 aa6.1□□□□□ -1.43
CLK1-204ENST00000432425 DUSP9Q99956 384 aaKnown RBP6.1□□□□□ -1.43
CLK1-204ENST00000432425 OSBPL1AQ9BXW6 950 aa6.1□□□□□ -1.43
CLK1-204ENST00000432425 GSX1Q9H4S2 264 aaPredicted RBP6.1□□□□□ -1.43
CLK1-204ENST00000432425 ACSS3Q9H6R3 686 aa6.1□□□□□ -1.43
CLK1-204ENST00000432425 PCMTD2Q9NV79 361 aa6.1□□□□□ -1.43
CLK1-204ENST00000432425 PPP1R9AQ9ULJ8 1098 aa6.1□□□□□ -1.43
CLK1-204ENST00000432425 ENC1O14682 589 aa6.09□□□□□ -1.43
CLK1-204ENST00000432425 DNAJC14Q6Y2X3 702 aaPredicted RBP6.09□□□□□ -1.43
CLK1-204ENST00000432425 SEMA6CQ9H3T2 930 aa6.09□□□□□ -1.43
CLK1-204ENST00000432425 CRIM1Q9NZV1 1036 aa6.09□□□□□ -1.43
CLK1-204ENST00000432425 PRKAG2Q9UGJ0 569 aa6.09□□□□□ -1.43
CLK1-204ENST00000432425 DAGLAQ9Y4D2 1042 aa6.09□□□□□ -1.43
CLK1-204ENST00000432425 LRRC14Q15048 493 aa6.08□□□□□ -1.44
CLK1-204ENST00000432425 INTS5Q6P9B9 1019 aaKnown RBP6.08□□□□□ -1.44
CLK1-204ENST00000432425 GPBAR1Q8TDU6 330 aa6.08□□□□□ -1.44
CLK1-204ENST00000432425 FANCD2OSQ96PS1 177 aa6.08□□□□□ -1.44
CLK1-204ENST00000432425 AK5Q9Y6K8 562 aa6.08□□□□□ -1.44
CLK1-204ENST00000432425 PAGE1O75459 146 aa6.07□□□□□ -1.44
CLK1-204ENST00000432425 F13BP05160 661 aa6.07□□□□□ -1.44
CLK1-204ENST00000432425 BMP6P22004 513 aa6.07□□□□□ -1.44
CLK1-204ENST00000432425 ZNF252P-AS1Q0IIN9 211 aa6.07□□□□□ -1.44
CLK1-204ENST00000432425 CPSF6Q16630 551 aaKnown RBP eCLIP6.07□□□□□ -1.44
CLK1-204ENST00000432425 LLGL2Q6P1M3 1020 aa6.07□□□□□ -1.44
CLK1-204ENST00000432425 SV2BQ7L1I2 683 aa6.07□□□□□ -1.44
CLK1-204ENST00000432425 METTL22Q9BUU2 404 aaPredicted RBP6.07□□□□□ -1.44
CLK1-204ENST00000432425 LEMD3Q9Y2U8 911 aa6.07□□□□□ -1.44
CLK1-204ENST00000432425 PRR19A6NJB7 356 aa6.07□□□□□ -1.44
CLK1-204ENST00000432425 RNGTTO60942 597 aaKnown RBP6.07□□□□□ -1.44
CLK1-204ENST00000432425 CELA3AP09093 270 aa6.07□□□□□ -1.44
CLK1-204ENST00000432425 ERCC3P19447 782 aa6.07□□□□□ -1.44
CLK1-204ENST00000432425 CD97P48960 835 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms