RNA–Protein interactions for RNA: ENST00000432103.6

RTN1-204, Transcript of reticulon 1, humanhuman

TSL 1 (best)

Gene RTN1, Length 2,101 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-204ENST00000432103 RUFY3Q7L099 469 aa16.34■□□□□ 0.21
RTN1-204ENST00000432103 NEK1Q96PY6 1258 aa16.34■□□□□ 0.21
RTN1-204ENST00000432103 AATFQ9NY61 560 aaKnown RBP eCLIP16.34■□□□□ 0.21
RTN1-204ENST00000432103 K7ELQ4 463 aaPredicted RBP16.33■□□□□ 0.21
RTN1-204ENST00000432103 HDLBPQ00341 1268 aaKnown RBP16.33■□□□□ 0.21
RTN1-204ENST00000432103 TRDNQ13061 729 aa16.33■□□□□ 0.21
RTN1-204ENST00000432103 ANKRD1Q15327 319 aa16.33■□□□□ 0.21
RTN1-204ENST00000432103 ZNF384Q8TF68 577 aa16.33■□□□□ 0.21
RTN1-204ENST00000432103 TTF2Q9UNY4 1162 aaKnown RBP16.33■□□□□ 0.21
RTN1-204ENST00000432103 GPR75-ASB3A0A0A6YYF3 556 aa16.33■□□□□ 0.2
RTN1-204ENST00000432103 GSG1L2A8MUP6 293 aa16.33■□□□□ 0.2
RTN1-204ENST00000432103 AMOTL1Q8IY63 956 aa16.33■□□□□ 0.2
RTN1-204ENST00000432103 ZNF277Q9NRM2 450 aaPredicted RBP16.33■□□□□ 0.2
RTN1-204ENST00000432103 ZNRF3Q9ULT6 936 aa16.33■□□□□ 0.2
RTN1-204ENST00000432103 GAKO14976 1311 aa16.32■□□□□ 0.2
RTN1-204ENST00000432103 FOXP2O15409 715 aa16.32■□□□□ 0.2
RTN1-204ENST00000432103 DACT2Q5SW24 774 aa16.32■□□□□ 0.2
RTN1-204ENST00000432103 HHIPL2Q6UWX4 724 aa16.32■□□□□ 0.2
RTN1-204ENST00000432103 TEKT1Q969V4 418 aa16.32■□□□□ 0.2
RTN1-204ENST00000432103 UPF3BQ9BZI7 483 aaKnown RBP16.31■□□□□ 0.2
RTN1-204ENST00000432103 RNF41Q9H4P4 317 aaPredicted RBP16.31■□□□□ 0.2
RTN1-204ENST00000432103 PDRG1Q9NUG6 133 aa16.31■□□□□ 0.2
RTN1-204ENST00000432103 SLC4A3P48751 1232 aa16.31■□□□□ 0.2
RTN1-204ENST00000432103 MMP14P50281 582 aa16.31■□□□□ 0.2
RTN1-204ENST00000432103 DYNLL1P63167 89 aaKnown RBP16.31■□□□□ 0.2
RTN1-204ENST00000432103 DIXDC1Q155Q3 683 aa16.31■□□□□ 0.2
RTN1-204ENST00000432103 RALYLQ86SE5 291 aaKnown RBP16.31■□□□□ 0.2
RTN1-204ENST00000432103 NLGN2Q8NFZ4 835 aa16.31■□□□□ 0.2
RTN1-204ENST00000432103 FHDC1Q9C0D6 1143 aaPredicted RBP16.31■□□□□ 0.2
RTN1-204ENST00000432103 ALDH8A1Q9H2A2 487 aaPredicted RBP16.31■□□□□ 0.2
RTN1-204ENST00000432103 CNNM2Q9H8M5 875 aa16.31■□□□□ 0.2
RTN1-204ENST00000432103 E7EWF7 191 aa16.3■□□□□ 0.2
RTN1-204ENST00000432103 HSP90AA1P07900 732 aaKnown RBP16.3■□□□□ 0.2
RTN1-204ENST00000432103 SLC3A2P08195 630 aaKnown RBP16.3■□□□□ 0.2
RTN1-204ENST00000432103 PCP11498 1178 aaKnown RBP16.3■□□□□ 0.2
RTN1-204ENST00000432103 BTDP43251 543 aa16.3■□□□□ 0.2
RTN1-204ENST00000432103 USP5P45974 858 aa16.3■□□□□ 0.2
RTN1-204ENST00000432103 NT5C2P49902 561 aa16.3■□□□□ 0.2
RTN1-204ENST00000432103 ADCK5Q3MIX3 580 aa16.3■□□□□ 0.2
RTN1-204ENST00000432103 NCOA7Q8NI08 942 aa16.3■□□□□ 0.2
RTN1-204ENST00000432103 ARPP21Q9UBL0 812 aaPredicted RBP16.3■□□□□ 0.2
RTN1-204ENST00000432103 RPS6KB1P23443 525 aa16.3■□□□□ 0.2
RTN1-204ENST00000432103 CERS5Q8N5B7 392 aa16.3■□□□□ 0.2
RTN1-204ENST00000432103 HDAC9Q9UKV0 1011 aa16.3■□□□□ 0.2
RTN1-204ENST00000432103 PRKAB2O43741 272 aa16.29■□□□□ 0.2
RTN1-204ENST00000432103 TNIP1Q15025 636 aa16.29■□□□□ 0.2
RTN1-204ENST00000432103 GRIK5Q16478 980 aa16.29■□□□□ 0.2
RTN1-204ENST00000432103 DHX32Q7L7V1 743 aaKnown RBP16.29■□□□□ 0.2
RTN1-204ENST00000432103 SDR42E1Q8WUS8 393 aa16.29■□□□□ 0.2
RTN1-204ENST00000432103 EPB41L4AQ9HCS5 686 aaPredicted RBP16.29■□□□□ 0.2
RTN1-204ENST00000432103 SERPINA10Q9UK55 444 aa16.29■□□□□ 0.2
RTN1-204ENST00000432103 FER1L6Q2WGJ9 1857 aa16.29■□□□□ 0.2
RTN1-204ENST00000432103 ARFGEF1Q9Y6D6 1849 aa16.29■□□□□ 0.2
RTN1-204ENST00000432103 F8W031 263 aaPredicted RBP16.28■□□□□ 0.2
RTN1-204ENST00000432103 RSBN1LQ6PCB5 846 aaPredicted RBP16.28■□□□□ 0.2
RTN1-204ENST00000432103 ZSCAN31Q96LW9 406 aaPredicted RBP16.28■□□□□ 0.2
RTN1-204ENST00000432103 KRT23Q9C075 422 aa16.28■□□□□ 0.2
RTN1-204ENST00000432103 ANAPC4Q9UJX5 808 aa16.28■□□□□ 0.2
RTN1-204ENST00000432103 YDJCA8MPS7 323 aa16.28■□□□□ 0.2
RTN1-204ENST00000432103 NFKBIEO00221 500 aa16.28■□□□□ 0.2
RTN1-204ENST00000432103 VIL1P09327 827 aaKnown RBP16.28■□□□□ 0.2
RTN1-204ENST00000432103 HAND2P61296 217 aa16.28■□□□□ 0.2
RTN1-204ENST00000432103 FGD1P98174 961 aa16.28■□□□□ 0.2
RTN1-204ENST00000432103 SBK1Q52WX2 424 aa16.28■□□□□ 0.2
RTN1-204ENST00000432103 MFSD6Q6ZSS7 791 aa16.28■□□□□ 0.2
RTN1-204ENST00000432103 OGFOD1Q8N543 542 aa16.28■□□□□ 0.2
RTN1-204ENST00000432103 AGBL3Q8NEM8 1001 aa16.28■□□□□ 0.2
RTN1-204ENST00000432103 TTC14Q96N46 770 aa16.28■□□□□ 0.2
RTN1-204ENST00000432103 DCP1AQ9NPI6 582 aaPredicted RBP16.28■□□□□ 0.2
RTN1-204ENST00000432103 RTN4Q9NQC3 1192 aaKnown RBP16.28■□□□□ 0.2
RTN1-204ENST00000432103 BRPF3Q9ULD4 1205 aa16.28■□□□□ 0.2
RTN1-204ENST00000432103 DAGLAQ9Y4D2 1042 aa16.28■□□□□ 0.2
RTN1-204ENST00000432103 WDR19Q8NEZ3 1342 aa16.28■□□□□ 0.2
RTN1-204ENST00000432103 CHD4Q14839 1912 aa16.27■□□□□ 0.2
RTN1-204ENST00000432103 MCM5P33992 734 aa16.27■□□□□ 0.2
RTN1-204ENST00000432103 PPARAQ07869 468 aa16.27■□□□□ 0.2
RTN1-204ENST00000432103 TEX11Q8IYF3 940 aa16.27■□□□□ 0.2
RTN1-204ENST00000432103 SH3RF3Q8TEJ3 882 aaPredicted RBP16.27■□□□□ 0.2
RTN1-204ENST00000432103 ZDHHC15Q96MV8 337 aa16.27■□□□□ 0.2
RTN1-204ENST00000432103 SYT17Q9BSW7 474 aa16.27■□□□□ 0.2
RTN1-204ENST00000432103 LIMCH1Q9UPQ0 1083 aa16.27■□□□□ 0.2
RTN1-204ENST00000432103 CRKP46108 304 aa16.27■□□□□ 0.19
RTN1-204ENST00000432103 AKNAD1Q5T1N1 836 aa16.27■□□□□ 0.19
RTN1-204ENST00000432103 KIAA0825Q8IV33 1275 aa16.27■□□□□ 0.19
RTN1-204ENST00000432103 KCNQ5Q9NR82 932 aa16.27■□□□□ 0.19
RTN1-204ENST00000432103 MYH2Q9UKX2 1941 aa16.26■□□□□ 0.19
RTN1-204ENST00000432103 CIAPIN1Q6FI81 312 aa16.26■□□□□ 0.19
RTN1-204ENST00000432103 STAG1Q8WVM7 1258 aa16.26■□□□□ 0.19
RTN1-204ENST00000432103 CHMP4CQ96CF2 233 aa16.26■□□□□ 0.19
RTN1-204ENST00000432103 ZNF287Q9HBT7 754 aa16.26■□□□□ 0.19
RTN1-204ENST00000432103 SH2B1Q9NRF2 756 aaPredicted RBP16.26■□□□□ 0.19
RTN1-204ENST00000432103 MINDY4BA8MYZ0 360 aa16.25■□□□□ 0.19
RTN1-204ENST00000432103 RBM5P52756 815 aaKnown RBP eCLIP16.25■□□□□ 0.19
RTN1-204ENST00000432103 AK2P54819 239 aa16.25■□□□□ 0.19
RTN1-204ENST00000432103 EIF6P56537 245 aaKnown RBP16.25■□□□□ 0.19
RTN1-204ENST00000432103 MXD3Q9BW11 206 aa16.25■□□□□ 0.19
RTN1-204ENST00000432103 MCM9Q9NXL9 1143 aa16.25■□□□□ 0.19
RTN1-204ENST00000432103 SRCAPQ6ZRS2 3230 aa16.25■□□□□ 0.19
RTN1-204ENST00000432103 PSMD14O00487 310 aa16.25■□□□□ 0.19
RTN1-204ENST00000432103 RAD17O75943 681 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms