RNA–Protein interactions for RNA: ENST00000431640.5

DDX56-204, Transcript of DEAD-box helicase 56, humanhuman

TSL 1 (best) BASIC

Gene DDX56, Length 1,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-204ENST00000431640 ZMYM6O95789 1325 aa15.07■□□□□ 0
DDX56-204ENST00000431640 TCRBV5S4A2TA0A5A2 114 aa15.07■□□□□ 0
DDX56-204ENST00000431640 JAK2O60674 1132 aa15.07■□□□□ 0
DDX56-204ENST00000431640 POLD1P28340 1107 aa15.07■□□□□ 0
DDX56-204ENST00000431640 UVSSAQ2YD98 709 aa15.07■□□□□ 0
DDX56-204ENST00000431640 RGS22Q8NE09 1264 aa15.07■□□□□ 0
DDX56-204ENST00000431640 NSUN7Q8NE18 718 aaKnown RBP15.07■□□□□ 0
DDX56-204ENST00000431640 AIDAQ96BJ3 306 aa15.07■□□□□ 0
DDX56-204ENST00000431640 RBM17Q96I25 401 aaKnown RBP15.07■□□□□ 0
DDX56-204ENST00000431640 GNL3LQ9NVN8 582 aaKnown RBP15.07■□□□□ 0
DDX56-204ENST00000431640 GOLGA6L4A6NEF3 574 aa15.06■□□□□ 0
DDX56-204ENST00000431640 PATL2C9JE40 543 aaKnown RBP15.06■□□□□ 0
DDX56-204ENST00000431640 PRC1O43663 620 aa15.06■□□□□ 0
DDX56-204ENST00000431640 APPP05067 770 aa15.06■□□□□ 0
DDX56-204ENST00000431640 DPEP1P16444 411 aa15.06■□□□□ 0
DDX56-204ENST00000431640 GNAT2P19087 354 aa15.06■□□□□ 0
DDX56-204ENST00000431640 MB21D2Q8IYB1 491 aaPredicted RBP15.06■□□□□ 0
DDX56-204ENST00000431640 MASTLQ96GX5 879 aa15.06■□□□□ 0
DDX56-204ENST00000431640 STRBPQ96SI9 672 aaKnown RBP15.06■□□□□ 0
DDX56-204ENST00000431640 IRS2Q9Y4H2 1338 aa15.05■□□□□ -0
DDX56-204ENST00000431640 A0A0G2JLW4 131 aa15.05■□□□□ -0
DDX56-204ENST00000431640 PTPDC1A2A3K4 754 aa15.05■□□□□ -0
DDX56-204ENST00000431640 KLRK1P26718 216 aa15.05■□□□□ -0
DDX56-204ENST00000431640 HAND2P61296 217 aa15.05■□□□□ -0
DDX56-204ENST00000431640 UBE4AQ14139 1066 aa15.05■□□□□ -0
DDX56-204ENST00000431640 HS1BP3Q53T59 392 aa15.05■□□□□ -0
DDX56-204ENST00000431640 STYK1Q6J9G0 422 aa15.05■□□□□ -0
DDX56-204ENST00000431640 FERMT3Q86UX7 667 aa15.05■□□□□ -0
DDX56-204ENST00000431640 SPATA32Q96LK8 384 aa15.05■□□□□ -0
DDX56-204ENST00000431640 PPEF1O14829 653 aaPredicted RBP15.04■□□□□ -0
DDX56-204ENST00000431640 RESTQ13127 1097 aa15.04■□□□□ -0
DDX56-204ENST00000431640 RASGRF1Q13972 1273 aa15.04■□□□□ -0
DDX56-204ENST00000431640 NLGN2Q8NFZ4 835 aa15.04■□□□□ -0
DDX56-204ENST00000431640 ZNF622Q969S3 477 aaKnown RBP eCLIP15.04■□□□□ -08e-7■■■□□ 14.9
DDX56-204ENST00000431640 DDX11Q96FC9 970 aa15.04■□□□□ -0
DDX56-204ENST00000431640 SPON1Q9HCB6 807 aa15.04■□□□□ -0
DDX56-204ENST00000431640 RTN4Q9NQC3 1192 aaKnown RBP15.04■□□□□ -0
DDX56-204ENST00000431640 NAP1L2Q9ULW6 460 aaPredicted RBP15.04■□□□□ -0
DDX56-204ENST00000431640 H0YIN7 160 aa15.03■□□□□ -0
DDX56-204ENST00000431640 CTDNEP1O95476 244 aa15.03■□□□□ -0
DDX56-204ENST00000431640 CCT2P78371 535 aaKnown RBP15.03■□□□□ -0
DDX56-204ENST00000431640 GPSM2P81274 684 aa15.03■□□□□ -0
DDX56-204ENST00000431640 CHST3Q7LGC8 479 aa15.03■□□□□ -0
DDX56-204ENST00000431640 TTC6Q86TZ1 520 aa15.03■□□□□ -0
DDX56-204ENST00000431640 ZNF396Q96N95 335 aaPredicted RBP15.03■□□□□ -0
DDX56-204ENST00000431640 NACAP1Q9BZK3 213 aa15.03■□□□□ -0
DDX56-204ENST00000431640 WWC3Q9ULE0 1092 aa15.03■□□□□ -0
DDX56-204ENST00000431640 SALL1Q9NSC2 1324 aa15.03■□□□□ -0
DDX56-204ENST00000431640 BCAMP50895 628 aa15.02■□□□□ -0
DDX56-204ENST00000431640 MAGEB6Q8N7X4 407 aa15.02■□□□□ -0
DDX56-204ENST00000431640 LEO1Q8WVC0 666 aaPredicted RBP15.02■□□□□ -0
DDX56-204ENST00000431640 C7orf43Q8WVR3 580 aa15.02■□□□□ -0
DDX56-204ENST00000431640 TMEM87BQ96K49 555 aa15.02■□□□□ -0
DDX56-204ENST00000431640 GPR101Q96P66 508 aaPredicted RBP15.02■□□□□ -0
DDX56-204ENST00000431640 COL1A1P02452 1464 aaPredicted RBP15.02□□□□□ -0.01
DDX56-204ENST00000431640 DTNBO60941 627 aa15.02□□□□□ -0.01
DDX56-204ENST00000431640 CAVIN4Q5BKX8 364 aa15.02□□□□□ -0.01
DDX56-204ENST00000431640 IFNL3Q8IZI9 196 aa15.02□□□□□ -0.01
DDX56-204ENST00000431640 PDLIM2Q96JY6 352 aa15.02□□□□□ -0.01
DDX56-204ENST00000431640 CNNM2Q9H8M5 875 aa15.02□□□□□ -0.01
DDX56-204ENST00000431640 LRP2BPQ9P2M1 347 aa15.02□□□□□ -0.01
DDX56-204ENST00000431640 DOCK2Q92608 1830 aa15.02□□□□□ -0.01
DDX56-204ENST00000431640 KLF18A0A0U1RQI7 1052 aa15.01□□□□□ -0.01
DDX56-204ENST00000431640 TXNRD3Q86VQ6 643 aa15.01□□□□□ -0.01
DDX56-204ENST00000431640 NAPBQ9H115 298 aa15.01□□□□□ -0.01
DDX56-204ENST00000431640 TFIP11Q9UBB9 837 aaKnown RBP15.01□□□□□ -0.01
DDX56-204ENST00000431640 PPP1R1BQ9UD71 204 aaPredicted RBP15.01□□□□□ -0.01
DDX56-204ENST00000431640 ANGEL1Q9UNK9 670 aaKnown RBP15.01□□□□□ -0.01
DDX56-204ENST00000431640 ATP6V0A2Q9Y487 856 aa15.01□□□□□ -0.01
DDX56-204ENST00000431640 ESPNB1AK53 854 aa15□□□□□ -0.01
DDX56-204ENST00000431640 CPLX1O14810 134 aa15□□□□□ -0.01
DDX56-204ENST00000431640 SEMA3EO15041 775 aa15□□□□□ -0.01
DDX56-204ENST00000431640 BBOX1O75936 387 aa15□□□□□ -0.01
DDX56-204ENST00000431640 CDKL5O76039 1030 aa15□□□□□ -0.01
DDX56-204ENST00000431640 ANTXR2P58335 489 aa15□□□□□ -0.01
DDX56-204ENST00000431640 CPLX2Q6PUV4 134 aaKnown RBP15□□□□□ -0.01
DDX56-204ENST00000431640 MTA3Q9BTC8 594 aa15□□□□□ -0.01
DDX56-204ENST00000431640 KRT23Q9C075 422 aa15□□□□□ -0.01
DDX56-204ENST00000431640 ANKRD2Q9GZV1 360 aa15□□□□□ -0.01
DDX56-204ENST00000431640 DDX19AQ9NUU7 478 aaKnown RBP15□□□□□ -0.01
DDX56-204ENST00000431640 ZNF219Q9P2Y4 722 aaPredicted RBP15□□□□□ -0.01
DDX56-204ENST00000431640 DENND2AQ9ULE3 1009 aa15□□□□□ -0.01
DDX56-204ENST00000431640 ZNF646O15015 1829 aaPredicted RBP15□□□□□ -0.01
DDX56-204ENST00000431640 ZNF804BA4D1E1 1349 aa15□□□□□ -0.01
DDX56-204ENST00000431640 MBD4O95243 580 aa14.99□□□□□ -0.01
DDX56-204ENST00000431640 TGFB2P61812 414 aa14.99□□□□□ -0.01
DDX56-204ENST00000431640 FAM173BQ6P4H8 233 aa14.99□□□□□ -0.01
DDX56-204ENST00000431640 TMED8Q6PL24 325 aaPredicted RBP14.99□□□□□ -0.01
DDX56-204ENST00000431640 FHDC1Q9C0D6 1143 aaPredicted RBP14.99□□□□□ -0.01
DDX56-204ENST00000431640 NCOA5Q9HCD5 579 aaKnown RBP14.99□□□□□ -0.01
DDX56-204ENST00000431640 POLLQ9UGP5 575 aa14.99□□□□□ -0.01
DDX56-204ENST00000431640 RCOR1Q9UKL0 485 aa14.99□□□□□ -0.01
DDX56-204ENST00000431640 CD2APQ9Y5K6 639 aa14.99□□□□□ -0.01
DDX56-204ENST00000431640 COL4A5P29400 1685 aa14.99□□□□□ -0.01
DDX56-204ENST00000431640 MYO5AQ9Y4I1 1855 aaKnown RBP14.99□□□□□ -0.01
DDX56-204ENST00000431640 XDHP47989 1333 aa14.99□□□□□ -0.01
DDX56-204ENST00000431640 ARFGEF1Q9Y6D6 1849 aa14.99□□□□□ -0.01
DDX56-204ENST00000431640 GOLGA8BA8MQT2 603 aa14.98□□□□□ -0.01
DDX56-204ENST00000431640 CCDC192P0DO97 292 aa14.98□□□□□ -0.01
DDX56-204ENST00000431640 ALDH1B1P30837 517 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 116.4 ms