RNA–Protein interactions for RNA: ENST00000431373.1

DDR1-236, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 886 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-236ENST00000431373 CDC42EP5Q6NZY7 148 aa22.6■■□□□ 1.21
DDR1-236ENST00000431373 LNPKQ9C0E8 428 aa22.6■■□□□ 1.21
DDR1-236ENST00000431373 PAG1Q9NWQ8 432 aa22.6■■□□□ 1.21
DDR1-236ENST00000431373 SALL3Q9BXA9 1300 aa22.59■■□□□ 1.21
DDR1-236ENST00000431373 GPR75-ASB3A0A0A6YYF3 556 aa22.59■■□□□ 1.21
DDR1-236ENST00000431373 TCP10L2B9ZVM9 353 aa22.59■■□□□ 1.21
DDR1-236ENST00000431373 BTDP43251 543 aa22.59■■□□□ 1.21
DDR1-236ENST00000431373 TNNI2P48788 182 aa22.59■■□□□ 1.21
DDR1-236ENST00000431373 CACNB3P54284 484 aa22.59■■□□□ 1.21
DDR1-236ENST00000431373 NUCB1Q02818 461 aa22.59■■□□□ 1.21
DDR1-236ENST00000431373 FKBP1CQ5VVH2 108 aa22.59■■□□□ 1.21
DDR1-236ENST00000431373 TSHZ3Q63HK5 1081 aa22.59■■□□□ 1.21
DDR1-236ENST00000431373 EDC3Q96F86 508 aaKnown RBP22.59■■□□□ 1.21
DDR1-236ENST00000431373 USP40Q9NVE5 1235 aa22.59■■□□□ 1.21
DDR1-236ENST00000431373 ERC2O15083 957 aa22.58■■□□□ 1.21
DDR1-236ENST00000431373 HTRA3P83110 453 aa22.58■■□□□ 1.21
DDR1-236ENST00000431373 RASA3Q14644 834 aa22.58■■□□□ 1.21
DDR1-236ENST00000431373 PRAMEF18Q5VWM3 479 aa22.58■■□□□ 1.21
DDR1-236ENST00000431373 CHD1LQ86WJ1 897 aa22.58■■□□□ 1.21
DDR1-236ENST00000431373 AK9Q5TCS8 1911 aa22.58■■□□□ 1.21
DDR1-236ENST00000431373 TMED8Q6PL24 325 aaPredicted RBP22.57■■□□□ 1.2
DDR1-236ENST00000431373 NOL10Q9BSC4 688 aaKnown RBP22.57■■□□□ 1.2
DDR1-236ENST00000431373 PAPPA2Q9BXP8 1791 aa22.57■■□□□ 1.2
DDR1-236ENST00000431373 CDK5RAP2Q96SN8 1893 aa22.57■■□□□ 1.2
DDR1-236ENST00000431373 CNTNAP1P78357 1384 aa22.56■■□□□ 1.2
DDR1-236ENST00000431373 GLRX3O76003 335 aaKnown RBP22.56■■□□□ 1.2
DDR1-236ENST00000431373 CYP7A1P22680 504 aa22.56■■□□□ 1.2
DDR1-236ENST00000431373 NF2P35240 595 aa22.56■■□□□ 1.2
DDR1-236ENST00000431373 IFFO2Q5TF58 517 aa22.56■■□□□ 1.2
DDR1-236ENST00000431373 FAM83AQ86UY5 434 aa22.56■■□□□ 1.2
DDR1-236ENST00000431373 MAGEB6Q8N7X4 407 aa22.56■■□□□ 1.2
DDR1-236ENST00000431373 PI4K2BQ8TCG2 481 aa22.56■■□□□ 1.2
DDR1-236ENST00000431373 FOCADQ5VW36 1801 aa22.55■■□□□ 1.2
DDR1-236ENST00000431373 C2orf69Q8N8R5 385 aa22.55■■□□□ 1.2
DDR1-236ENST00000431373 GBA2Q9HCG7 927 aaPredicted RBP22.55■■□□□ 1.2
DDR1-236ENST00000431373 STAP2Q9UGK3 403 aa22.55■■□□□ 1.2
DDR1-236ENST00000431373 ABT1Q9ULW3 272 aaKnown RBP22.55■■□□□ 1.2
DDR1-236ENST00000431373 BAG3O95817 575 aa22.54■■□□□ 1.2
DDR1-236ENST00000431373 MAP4K4O95819 1239 aaPredicted RBP22.54■■□□□ 1.2
DDR1-236ENST00000431373 PDE1AP54750 535 aa22.54■■□□□ 1.2
DDR1-236ENST00000431373 RHBDL3P58872 404 aa22.54■■□□□ 1.2
DDR1-236ENST00000431373 SLC9C2Q5TAH2 1124 aa22.54■■□□□ 1.2
DDR1-236ENST00000431373 ADGRA1Q86SQ6 560 aa22.54■■□□□ 1.2
DDR1-236ENST00000431373 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.54■■□□□ 1.23e-7■■□□□ 11.5
DDR1-236ENST00000431373 TMEM39BQ9GZU3 492 aa22.54■■□□□ 1.2
DDR1-236ENST00000431373 TLL2Q9Y6L7 1015 aa22.54■■□□□ 1.2
DDR1-236ENST00000431373 RFX7Q2KHR2 1363 aa22.53■■□□□ 1.2
DDR1-236ENST00000431373 PDE6AP16499 860 aa22.53■■□□□ 1.2
DDR1-236ENST00000431373 PPP4CP60510 307 aa22.53■■□□□ 1.2
DDR1-236ENST00000431373 NFIAQ12857 509 aa22.53■■□□□ 1.2
DDR1-236ENST00000431373 SUPT20HL1Q3ZLR7 823 aa22.53■■□□□ 1.2
DDR1-236ENST00000431373 FAM151AQ8WW52 585 aa22.53■■□□□ 1.2
DDR1-236ENST00000431373 IDI2Q9BXS1 227 aa22.53■■□□□ 1.2
DDR1-236ENST00000431373 AATFQ9NY61 560 aaKnown RBP eCLIP22.53■■□□□ 1.2
DDR1-236ENST00000431373 RPAP1Q9BWH6 1393 aaPredicted RBP22.52■■□□□ 1.2
DDR1-236ENST00000431373 SSC5DA1L4H1 1573 aa22.52■■□□□ 1.2
DDR1-236ENST00000431373 PLCG2P16885 1265 aa22.52■■□□□ 1.2
DDR1-236ENST00000431373 FKBP1BP68106 108 aa22.52■■□□□ 1.2
DDR1-236ENST00000431373 NBPF12Q5TAG4 269 aaPredicted RBP22.52■■□□□ 1.2
DDR1-236ENST00000431373 TEPSINQ96N21 525 aa22.52■■□□□ 1.2
DDR1-236ENST00000431373 FAM198AQ9UFP1 575 aa22.52■■□□□ 1.2
DDR1-236ENST00000431373 WDHD1O75717 1129 aaPredicted RBP22.51■■□□□ 1.19
DDR1-236ENST00000431373 TCP10Q12799 353 aa22.51■■□□□ 1.19
DDR1-236ENST00000431373 SAPCD2Q86UD0 394 aa22.51■■□□□ 1.19
DDR1-236ENST00000431373 TEX11Q8IYF3 940 aa22.51■■□□□ 1.19
DDR1-236ENST00000431373 KBTBD3Q8NAB2 608 aa22.51■■□□□ 1.19
DDR1-236ENST00000431373 SH3RF3Q8TEJ3 882 aaPredicted RBP22.51■■□□□ 1.19
DDR1-236ENST00000431373 ZNF532Q9HCE3 1301 aa22.51■■□□□ 1.19
DDR1-236ENST00000431373 RASSF10A6NK89 507 aa22.5■■□□□ 1.19
DDR1-236ENST00000431373 ENTPD3O75355 529 aa22.5■■□□□ 1.19
DDR1-236ENST00000431373 ADD2P35612 726 aa22.5■■□□□ 1.19
DDR1-236ENST00000431373 RGS3P49796 1198 aa22.5■■□□□ 1.19
DDR1-236ENST00000431373 TTLL12Q14166 644 aaPredicted RBP22.5■■□□□ 1.19
DDR1-236ENST00000431373 ZSCAN25Q6NSZ9 544 aa22.5■■□□□ 1.19
DDR1-236ENST00000431373 CERS3Q8IU89 383 aa22.5■■□□□ 1.19
DDR1-236ENST00000431373 CDAN1Q8IWY9 1227 aa22.5■■□□□ 1.19
DDR1-236ENST00000431373 MIGA1Q8NAN2 632 aa22.5■■□□□ 1.19
DDR1-236ENST00000431373 TCRBV5S4A2TA0A5A2 114 aa22.49■■□□□ 1.19
DDR1-236ENST00000431373 HUNKP57058 714 aa22.49■■□□□ 1.19
DDR1-236ENST00000431373 DYNLL1P63167 89 aaKnown RBP22.49■■□□□ 1.19
DDR1-236ENST00000431373 PICALMQ13492 652 aa22.49■■□□□ 1.19
DDR1-236ENST00000431373 DEFB115Q30KQ5 88 aa22.49■■□□□ 1.19
DDR1-236ENST00000431373 PLEKHM2Q8IWE5 1019 aa22.49■■□□□ 1.19
DDR1-236ENST00000431373 DDX4Q9NQI0 724 aaKnown RBP22.49■■□□□ 1.19
DDR1-236ENST00000431373 MKRN1Q9UHC7 482 aaKnown RBP22.49■■□□□ 1.19
DDR1-236ENST00000431373 PPP1R12BO60237 982 aaPredicted RBP22.48■■□□□ 1.19
DDR1-236ENST00000431373 NPM3O75607 178 aaKnown RBP22.48■■□□□ 1.19
DDR1-236ENST00000431373 PRKG1Q13976 671 aa22.48■■□□□ 1.19
DDR1-236ENST00000431373 ARMC9Q7Z3E5 817 aa22.48■■□□□ 1.19
DDR1-236ENST00000431373 HOOK2Q96ED9 719 aa22.48■■□□□ 1.19
DDR1-236ENST00000431373 HHIPL1Q96JK4 782 aa22.48■■□□□ 1.19
DDR1-236ENST00000431373 OSBPL3Q9H4L5 887 aa22.48■■□□□ 1.19
DDR1-236ENST00000431373 MYH1P12882 1939 aa22.47■■□□□ 1.19
DDR1-236ENST00000431373 MOB2Q70IA6 237 aa22.47■■□□□ 1.19
DDR1-236ENST00000431373 ZFPM1Q8IX07 1006 aa22.47■■□□□ 1.19
DDR1-236ENST00000431373 DNAJC5GQ8N7S2 189 aa22.47■■□□□ 1.19
DDR1-236ENST00000431373 OTOFQ9HC10 1997 aa22.47■■□□□ 1.19
DDR1-236ENST00000431373 MAGEB6P1A0A0J9YX57 407 aa22.46■■□□□ 1.19
DDR1-236ENST00000431373 UBE3CQ15386 1083 aa22.46■■□□□ 1.19
DDR1-236ENST00000431373 CENPQQ7L2Z9 268 aaPredicted RBP22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms