RNA–Protein interactions for RNA: ENST00000429713.6

SYNPO2-202, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 9,920 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-202ENST00000429713 TULP2O00295 520 aa8.45□□□□□ -1.06
SYNPO2-202ENST00000429713 NCBP1Q09161 790 aaKnown RBP8.45□□□□□ -1.06
SYNPO2-202ENST00000429713 SCLT1Q96NL6 688 aa8.45□□□□□ -1.06
SYNPO2-202ENST00000429713 NDUFA13Q9P0J0 144 aa8.45□□□□□ -1.06
SYNPO2-202ENST00000429713 CYLC1P35663 651 aaPredicted RBP8.45□□□□□ -1.06
SYNPO2-202ENST00000429713 BIRC2Q13490 618 aa8.45□□□□□ -1.06
SYNPO2-202ENST00000429713 CCDC77Q9BR77 488 aa8.45□□□□□ -1.06
SYNPO2-202ENST00000429713 BOLA2Q9H3K6 86 aa8.45□□□□□ -1.06
SYNPO2-202ENST00000429713 TMEM51Q9NW97 253 aa8.45□□□□□ -1.06
SYNPO2-202ENST00000429713 LCA5Q86VQ0 697 aa8.45□□□□□ -1.06
SYNPO2-202ENST00000429713 PLEKHM2Q8IWE5 1019 aa8.45□□□□□ -1.06
SYNPO2-202ENST00000429713 HYPKQ9NX55 129 aa8.45□□□□□ -1.06
SYNPO2-202ENST00000429713 NOL3O60936 208 aaKnown RBP8.45□□□□□ -1.06
SYNPO2-202ENST00000429713 TAF7Q15545 349 aaPredicted RBP8.45□□□□□ -1.06
SYNPO2-202ENST00000429713 WAPLQ7Z5K2 1190 aa8.45□□□□□ -1.06
SYNPO2-202ENST00000429713 TDRD7Q8NHU6 1098 aaKnown RBP8.45□□□□□ -1.06
SYNPO2-202ENST00000429713 FAM114A2Q9NRY5 505 aa8.45□□□□□ -1.06
SYNPO2-202ENST00000429713 LMBRD1Q9NUN5 540 aa8.45□□□□□ -1.06
SYNPO2-202ENST00000429713 UNC13BO14795 1591 aa8.45□□□□□ -1.06
SYNPO2-202ENST00000429713 WDHD1O75717 1129 aaPredicted RBP8.45□□□□□ -1.06
SYNPO2-202ENST00000429713 FLIIQ13045 1269 aa8.45□□□□□ -1.06
SYNPO2-202ENST00000429713 ZGPATQ8N5A5 531 aaKnown RBP8.45□□□□□ -1.06
SYNPO2-202ENST00000429713 NUB1Q9Y5A7 615 aa8.45□□□□□ -1.06
SYNPO2-202ENST00000429713 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.45□□□□□ -1.06
SYNPO2-202ENST00000429713 BAZ2BQ9UIF8 2168 aaKnown RBP8.45□□□□□ -1.06
SYNPO2-202ENST00000429713 EIF3CLB5ME19 914 aaKnown RBP8.45□□□□□ -1.06
SYNPO2-202ENST00000429713 TNNC1P63316 161 aa8.45□□□□□ -1.06
SYNPO2-202ENST00000429713 CCDC6Q16204 474 aa8.45□□□□□ -1.06
SYNPO2-202ENST00000429713 RNF10Q8N5U6 811 aaKnown RBP8.45□□□□□ -1.06
SYNPO2-202ENST00000429713 TRIM58Q8NG06 486 aa8.45□□□□□ -1.06
SYNPO2-202ENST00000429713 EIF3CQ99613 913 aaKnown RBP8.45□□□□□ -1.06
SYNPO2-202ENST00000429713 SYT1P21579 422 aa8.45□□□□□ -1.06
SYNPO2-202ENST00000429713 CPLX4Q7Z7G2 160 aa8.45□□□□□ -1.06
SYNPO2-202ENST00000429713 MRPL50Q8N5N7 158 aaKnown RBP8.45□□□□□ -1.06
SYNPO2-202ENST00000429713 FERP16591 822 aa8.45□□□□□ -1.06
SYNPO2-202ENST00000429713 PDE1AP54750 535 aa8.45□□□□□ -1.06
SYNPO2-202ENST00000429713 TUBA4AP68366 448 aa8.45□□□□□ -1.06
SYNPO2-202ENST00000429713 PAK2Q13177 524 aa8.45□□□□□ -1.06
SYNPO2-202ENST00000429713 SEPT7Q16181 437 aaKnown RBP8.45□□□□□ -1.06
SYNPO2-202ENST00000429713 SARM1Q6SZW1 724 aa8.45□□□□□ -1.06
SYNPO2-202ENST00000429713 SESTD1Q86VW0 696 aa8.45□□□□□ -1.06
SYNPO2-202ENST00000429713 C14orf93Q9H972 538 aaKnown RBP8.45□□□□□ -1.06
SYNPO2-202ENST00000429713 FAM83GA6ND36 823 aa8.44□□□□□ -1.06
SYNPO2-202ENST00000429713 SYT10Q6XYQ8 523 aa8.44□□□□□ -1.06
SYNPO2-202ENST00000429713 RAB11FIP4Q86YS3 637 aa8.44□□□□□ -1.06
SYNPO2-202ENST00000429713 NUTM2AQ8IVF1 878 aaPredicted RBP8.44□□□□□ -1.06
SYNPO2-202ENST00000429713 ZNF653Q96CK0 615 aa8.44□□□□□ -1.06
SYNPO2-202ENST00000429713 TNNQ9UQP3 1299 aa8.44□□□□□ -1.06
SYNPO2-202ENST00000429713 TARSL2A2RTX5 802 aaKnown RBP8.44□□□□□ -1.06
SYNPO2-202ENST00000429713 RAB15P59190 212 aa8.44□□□□□ -1.06
SYNPO2-202ENST00000429713 TAOK1Q7L7X3 1001 aa8.44□□□□□ -1.06
SYNPO2-202ENST00000429713 C16orf71Q8IYS4 520 aaPredicted RBP8.44□□□□□ -1.06
SYNPO2-202ENST00000429713 STAMBPL1Q96FJ0 436 aa8.44□□□□□ -1.06
SYNPO2-202ENST00000429713 TUBB6Q9BUF5 446 aa8.44□□□□□ -1.06
SYNPO2-202ENST00000429713 FAM192AQ9GZU8 254 aa8.44□□□□□ -1.06
SYNPO2-202ENST00000429713 ZNF215Q9UL58 517 aaPredicted RBP8.44□□□□□ -1.06
SYNPO2-202ENST00000429713 RGS12O14924 1447 aa8.44□□□□□ -1.06
SYNPO2-202ENST00000429713 ZSCAN25Q6NSZ9 544 aa8.44□□□□□ -1.06
SYNPO2-202ENST00000429713 STMN2Q93045 179 aa8.44□□□□□ -1.06
SYNPO2-202ENST00000429713 C8orf76Q96K31 380 aa8.44□□□□□ -1.06
SYNPO2-202ENST00000429713 KIF2CQ99661 725 aa8.44□□□□□ -1.06
SYNPO2-202ENST00000429713 USP26Q9BXU7 913 aa8.44□□□□□ -1.06
SYNPO2-202ENST00000429713 TXLNGQ9NUQ3 528 aa8.44□□□□□ -1.06
SYNPO2-202ENST00000429713 SCOCQ9UIL1 159 aa8.44□□□□□ -1.06
SYNPO2-202ENST00000429713 MAP7D1Q3KQU3 841 aa8.44□□□□□ -1.06
SYNPO2-202ENST00000429713 ANKRD44Q8N8A2 993 aa8.44□□□□□ -1.06
SYNPO2-202ENST00000429713 MBD5Q9P267 1494 aa8.44□□□□□ -1.06
SYNPO2-202ENST00000429713 NINQ8N4C6 2090 aa8.44□□□□□ -1.06
SYNPO2-202ENST00000429713 CAPS2Q9BXY5 557 aa8.44□□□□□ -1.06
SYNPO2-202ENST00000429713 TTC21BQ7Z4L5 1316 aa8.44□□□□□ -1.06
SYNPO2-202ENST00000429713 FAM160A1Q05DH4 1040 aa8.44□□□□□ -1.06
SYNPO2-202ENST00000429713 TMC6Q7Z403 805 aa8.44□□□□□ -1.06
SYNPO2-202ENST00000429713 FNBP4Q8N3X1 1017 aaPredicted RBP8.44□□□□□ -1.06
SYNPO2-202ENST00000429713 MYO5BQ9ULV0 1848 aa8.44□□□□□ -1.06
SYNPO2-202ENST00000429713 ABCC10Q5T3U5 1492 aa8.43□□□□□ -1.06
SYNPO2-202ENST00000429713 TMTC1Q8IUR5 882 aa8.43□□□□□ -1.06
SYNPO2-202ENST00000429713 DHX37Q8IY37 1157 aaKnown RBP8.43□□□□□ -1.06
SYNPO2-202ENST00000429713 CETN2P41208 172 aa8.43□□□□□ -1.06
SYNPO2-202ENST00000429713 SLC4A8Q2Y0W8 1093 aa8.43□□□□□ -1.06
SYNPO2-202ENST00000429713 G3V3G9 751 aa8.43□□□□□ -1.06
SYNPO2-202ENST00000429713 HMGB3O15347 200 aaKnown RBP8.43□□□□□ -1.06
SYNPO2-202ENST00000429713 PFDN1O60925 122 aa8.43□□□□□ -1.06
SYNPO2-202ENST00000429713 KIF4AO95239 1232 aa8.43□□□□□ -1.06
SYNPO2-202ENST00000429713 SLC3A2P08195 630 aaKnown RBP8.43□□□□□ -1.06
SYNPO2-202ENST00000429713 IKQ13123 557 aaPredicted RBP8.43□□□□□ -1.06
SYNPO2-202ENST00000429713 BIRC3Q13489 604 aa8.43□□□□□ -1.06
SYNPO2-202ENST00000429713 DCAF8Q5TAQ9 597 aa8.43□□□□□ -1.06
SYNPO2-202ENST00000429713 NME8Q8N427 588 aa8.43□□□□□ -1.06
SYNPO2-202ENST00000429713 DDX54Q8TDD1 881 aaKnown RBP8.43□□□□□ -1.06
SYNPO2-202ENST00000429713 MEIS3Q99687 375 aa8.43□□□□□ -1.06
SYNPO2-202ENST00000429713 CARD14Q9BXL6 1004 aa8.43□□□□□ -1.06
SYNPO2-202ENST00000429713 ETAA1Q9NY74 926 aa8.43□□□□□ -1.06
SYNPO2-202ENST00000429713 ADAM21Q9UKJ8 722 aa8.43□□□□□ -1.06
SYNPO2-202ENST00000429713 UBN2Q6ZU65 1347 aa8.43□□□□□ -1.06
SYNPO2-202ENST00000429713 RASSF10A6NK89 507 aa8.43□□□□□ -1.06
SYNPO2-202ENST00000429713 DNM1Q05193 864 aaKnown RBP8.43□□□□□ -1.06
SYNPO2-202ENST00000429713 NAPGQ99747 312 aaPredicted RBP8.43□□□□□ -1.06
SYNPO2-202ENST00000429713 LLPHQ9BRT6 129 aaKnown RBP8.43□□□□□ -1.06
SYNPO2-202ENST00000429713 RMND1Q9NWS8 449 aa8.43□□□□□ -1.06
SYNPO2-202ENST00000429713 DCTPP1Q9H773 170 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 509 ms