RNA–Protein interactions for RNA: ENST00000429670.2

GYPB-201, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best) BASIC

Gene GYPB, Length 239 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-201ENST00000429670 FAM105AQ9NUU6 356 aa5.28□□□□□ -1.56
GYPB-201ENST00000429670 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.28□□□□□ -1.56
GYPB-201ENST00000429670 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.28□□□□□ -1.56
GYPB-201ENST00000429670 TMEM265A0A087WTH1 108 aa5.27□□□□□ -1.57
GYPB-201ENST00000429670 ZNF503-AS2A6NEH8 195 aa5.27□□□□□ -1.57
GYPB-201ENST00000429670 NFIBO00712 420 aa5.27□□□□□ -1.57
GYPB-201ENST00000429670 ZBTB39O15060 712 aa5.27□□□□□ -1.57
GYPB-201ENST00000429670 SRPK2P78362 688 aaKnown RBP5.27□□□□□ -1.57
GYPB-201ENST00000429670 NAA30Q147X3 362 aaPredicted RBP5.27□□□□□ -1.57
GYPB-201ENST00000429670 AKAP4Q5JQC9 854 aa5.27□□□□□ -1.57
GYPB-201ENST00000429670 HRASLS5Q96KN8 279 aa5.27□□□□□ -1.57
GYPB-201ENST00000429670 BHLHE41Q9C0J9 482 aaPredicted RBP5.27□□□□□ -1.57
GYPB-201ENST00000429670 DAGLAQ9Y4D2 1042 aa5.27□□□□□ -1.57
GYPB-201ENST00000429670 MAOBP27338 520 aa5.26□□□□□ -1.57
GYPB-201ENST00000429670 AFMP43652 599 aa5.26□□□□□ -1.57
GYPB-201ENST00000429670 RANGAP1P46060 587 aaPredicted RBP5.26□□□□□ -1.57
GYPB-201ENST00000429670 CTSWP56202 376 aa5.26□□□□□ -1.57
GYPB-201ENST00000429670 POU4F3Q15319 338 aa5.26□□□□□ -1.57
GYPB-201ENST00000429670 OCLNQ16625 522 aa5.26□□□□□ -1.57
GYPB-201ENST00000429670 CFAP70Q5T0N1 1121 aa5.26□□□□□ -1.57
GYPB-201ENST00000429670 ARHGAP27Q6ZUM4 889 aa5.26□□□□□ -1.57
GYPB-201ENST00000429670 DDX54Q8TDD1 881 aaKnown RBP5.26□□□□□ -1.57
GYPB-201ENST00000429670 ZKSCAN3Q9BRR0 538 aa5.26□□□□□ -1.57
GYPB-201ENST00000429670 BRD1O95696 1058 aa5.25□□□□□ -1.57
GYPB-201ENST00000429670 KCNA1Q09470 495 aa5.25□□□□□ -1.57
GYPB-201ENST00000429670 NRSN2Q9GZP1 204 aa5.25□□□□□ -1.57
GYPB-201ENST00000429670 NOVA2Q9UNW9 492 aaKnown RBP5.25□□□□□ -1.57
GYPB-201ENST00000429670 AP4E1Q9UPM8 1137 aa5.25□□□□□ -1.57
GYPB-201ENST00000429670 SNX11Q9Y5W9 270 aa5.25□□□□□ -1.57
GYPB-201ENST00000429670 SYNGAP1Q96PV0 1343 aa5.24□□□□□ -1.57
GYPB-201ENST00000429670 DYNC1LI2O43237 492 aaPredicted RBP5.24□□□□□ -1.57
GYPB-201ENST00000429670 C8orf34Q49A92 452 aa5.24□□□□□ -1.57
GYPB-201ENST00000429670 LGR6Q9HBX8 967 aa5.24□□□□□ -1.57
GYPB-201ENST00000429670 ATG7O95352 703 aa5.23□□□□□ -1.57
GYPB-201ENST00000429670 FAM87AP0C7U9 286 aa5.23□□□□□ -1.57
GYPB-201ENST00000429670 C1QTNF9P0C862 333 aa5.23□□□□□ -1.57
GYPB-201ENST00000429670 MPZL3Q6UWV2 235 aa5.23□□□□□ -1.57
GYPB-201ENST00000429670 FAM181AQ8N9Y4 354 aa5.23□□□□□ -1.57
GYPB-201ENST00000429670 LIN37Q96GY3 246 aaPredicted RBP5.23□□□□□ -1.57
GYPB-201ENST00000429670 CORO1BQ9BR76 489 aa5.23□□□□□ -1.57
GYPB-201ENST00000429670 MKNK1Q9BUB5 465 aa5.23□□□□□ -1.57
GYPB-201ENST00000429670 CHRDQ9H2X0 955 aa5.23□□□□□ -1.57
GYPB-201ENST00000429670 CRIM1Q9NZV1 1036 aa5.23□□□□□ -1.57
GYPB-201ENST00000429670 CXXC1Q9P0U4 656 aaPredicted RBP5.23□□□□□ -1.57
GYPB-201ENST00000429670 JAG2Q9Y219 1238 aa5.23□□□□□ -1.57
GYPB-201ENST00000429670 GLI1P08151 1106 aa5.22□□□□□ -1.57
GYPB-201ENST00000429670 TMEM253P0C7T8 217 aa5.22□□□□□ -1.57
GYPB-201ENST00000429670 CD96P40200 585 aa5.22□□□□□ -1.57
GYPB-201ENST00000429670 PCDH1Q08174 1060 aa5.22□□□□□ -1.57
GYPB-201ENST00000429670 DBX2Q6ZNG2 339 aa5.22□□□□□ -1.57
GYPB-201ENST00000429670 FBXO15Q8NCQ5 510 aaPredicted RBP5.22□□□□□ -1.57
GYPB-201ENST00000429670 ASB11Q8WXH4 323 aa5.22□□□□□ -1.57
GYPB-201ENST00000429670 CSRNP1Q96S65 589 aa5.22□□□□□ -1.57
GYPB-201ENST00000429670 CLEC4MQ9H2X3 399 aaPredicted RBP5.22□□□□□ -1.57
GYPB-201ENST00000429670 GGNBP2Q9H3C7 697 aa5.22□□□□□ -1.57
GYPB-201ENST00000429670 AOC2O75106 756 aa5.21□□□□□ -1.58
GYPB-201ENST00000429670 CEACAM5P06731 702 aa5.21□□□□□ -1.58
GYPB-201ENST00000429670 INHBBP09529 407 aa5.21□□□□□ -1.58
GYPB-201ENST00000429670 DNM1Q05193 864 aaKnown RBP5.21□□□□□ -1.58
GYPB-201ENST00000429670 ELOAQ14241 798 aaKnown RBP5.21□□□□□ -1.58
GYPB-201ENST00000429670 TMEM67Q5HYA8 995 aa5.21□□□□□ -1.58
GYPB-201ENST00000429670 PRR23BQ6ZRT6 265 aa5.21□□□□□ -1.58
GYPB-201ENST00000429670 CAPN12Q6ZSI9 719 aa5.21□□□□□ -1.58
GYPB-201ENST00000429670 NPM2Q86SE8 214 aaKnown RBP5.21□□□□□ -1.58
GYPB-201ENST00000429670 EDEM1Q92611 657 aa5.21□□□□□ -1.58
GYPB-201ENST00000429670 RELTQ969Z4 430 aa5.21□□□□□ -1.58
GYPB-201ENST00000429670 CTNND2Q9UQB3 1225 aa5.21□□□□□ -1.58
GYPB-201ENST00000429670 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.2□□□□□ -1.58
GYPB-201ENST00000429670 EREGO14944 169 aa5.2□□□□□ -1.58
GYPB-201ENST00000429670 PHACTR2O75167 634 aa5.2□□□□□ -1.58
GYPB-201ENST00000429670 MZF1P28698 734 aaPredicted RBP5.2□□□□□ -1.58
GYPB-201ENST00000429670 OXCT1P55809 520 aa5.2□□□□□ -1.58
GYPB-201ENST00000429670 ZNF423Q2M1K9 1284 aa5.2□□□□□ -1.58
GYPB-201ENST00000429670 CDCA8Q53HL2 280 aa5.2□□□□□ -1.58
GYPB-201ENST00000429670 CIAPIN1Q6FI81 312 aa5.2□□□□□ -1.58
GYPB-201ENST00000429670 ATCAYQ86WG3 371 aa5.2□□□□□ -1.58
GYPB-201ENST00000429670 PIDD1Q9HB75 910 aa5.2□□□□□ -1.58
GYPB-201ENST00000429670 A0A096LPE4 126 aa5.19□□□□□ -1.58
GYPB-201ENST00000429670 A0A1W2PPZ6 126 aa5.19□□□□□ -1.58
GYPB-201ENST00000429670 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.19□□□□□ -1.58
GYPB-201ENST00000429670 NPIPB6E9PJ23 425 aa5.19□□□□□ -1.58
GYPB-201ENST00000429670 CTSBP07858 339 aa5.19□□□□□ -1.58
GYPB-201ENST00000429670 SLFN14P0C7P3 912 aa5.19□□□□□ -1.58
GYPB-201ENST00000429670 ZP2Q05996 745 aa5.19□□□□□ -1.58
GYPB-201ENST00000429670 FAM69CQ0P6D2 419 aa5.19□□□□□ -1.58
GYPB-201ENST00000429670 CDK5R2Q13319 367 aa5.19□□□□□ -1.58
GYPB-201ENST00000429670 B4GALNT3Q6L9W6 998 aa5.19□□□□□ -1.58
GYPB-201ENST00000429670 AEBP1Q8IUX7 1158 aa5.19□□□□□ -1.58
GYPB-201ENST00000429670 KIRREL1Q96J84 757 aa5.19□□□□□ -1.58
GYPB-201ENST00000429670 ATXN3LQ9H3M9 355 aa5.19□□□□□ -1.58
GYPB-201ENST00000429670 PLAGL2Q9UPG8 496 aa5.19□□□□□ -1.58
GYPB-201ENST00000429670 PDGFAP04085 211 aa5.18□□□□□ -1.58
GYPB-201ENST00000429670 KRT1P04264 644 aa5.18□□□□□ -1.58
GYPB-201ENST00000429670 HNRNPUQ00839 825 aaKnown RBP eCLIP5.18□□□□□ -1.58
GYPB-201ENST00000429670 IKZF1Q13422 519 aa5.18□□□□□ -1.58
GYPB-201ENST00000429670 PDE3AQ14432 1141 aa5.18□□□□□ -1.58
GYPB-201ENST00000429670 NOM1Q5C9Z4 860 aaKnown RBP5.18□□□□□ -1.58
GYPB-201ENST00000429670 TMCO4Q5TGY1 634 aa5.18□□□□□ -1.58
GYPB-201ENST00000429670 CYFIP1Q7L576 1253 aa5.18□□□□□ -1.58
GYPB-201ENST00000429670 TNKS2Q9H2K2 1166 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms