RNA–Protein interactions for RNA: ENST00000428680.6

CNOT4-206, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 4,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-206ENST00000428680 IL16Q14005 1332 aa8.4□□□□□ -1.06
CNOT4-206ENST00000428680 ZBED9Q6R2W3 1325 aa8.4□□□□□ -1.06
CNOT4-206ENST00000428680 PITPNM2Q9BZ72 1349 aa8.4□□□□□ -1.06
CNOT4-206ENST00000428680 MSNP26038 577 aaKnown RBP8.4□□□□□ -1.06
CNOT4-206ENST00000428680 NOM1Q5C9Z4 860 aaKnown RBP8.4□□□□□ -1.06
CNOT4-206ENST00000428680 GIGYF2Q6Y7W6 1299 aaKnown RBP8.4□□□□□ -1.06
CNOT4-206ENST00000428680 GADL1Q6ZQY3 521 aa8.4□□□□□ -1.06
CNOT4-206ENST00000428680 WDR66Q8TBY9 1149 aa8.4□□□□□ -1.06
CNOT4-206ENST00000428680 RASSF10A6NK89 507 aa8.4□□□□□ -1.06
CNOT4-206ENST00000428680 GRM8O00222 908 aa8.4□□□□□ -1.06
CNOT4-206ENST00000428680 SP4Q02446 784 aa8.4□□□□□ -1.06
CNOT4-206ENST00000428680 LINS1Q8NG48 757 aa8.4□□□□□ -1.06
CNOT4-206ENST00000428680 FERMT2Q96AC1 680 aa8.4□□□□□ -1.06
CNOT4-206ENST00000428680 RTFDC1Q9BY42 306 aaPredicted RBP8.4□□□□□ -1.06
CNOT4-206ENST00000428680 CAPN15O75808 1086 aa8.4□□□□□ -1.07
CNOT4-206ENST00000428680 EPHX2P34913 555 aa8.4□□□□□ -1.07
CNOT4-206ENST00000428680 GTF2IP78347 998 aa8.4□□□□□ -1.07
CNOT4-206ENST00000428680 TRIM28Q13263 835 aaKnown RBP8.4□□□□□ -1.07
CNOT4-206ENST00000428680 DHX8Q14562 1220 aaKnown RBP8.4□□□□□ -1.07
CNOT4-206ENST00000428680 DENND2AQ9ULE3 1009 aa8.4□□□□□ -1.07
CNOT4-206ENST00000428680 M0QZ92 97 aa8.39□□□□□ -1.07
CNOT4-206ENST00000428680 NOP56O00567 594 aaKnown RBP8.39□□□□□ -1.07
CNOT4-206ENST00000428680 PER1O15534 1290 aaPredicted RBP8.39□□□□□ -1.07
CNOT4-206ENST00000428680 FMNL1O95466 1100 aaPredicted RBP8.39□□□□□ -1.07
CNOT4-206ENST00000428680 CCNA1P78396 465 aa8.39□□□□□ -1.07
CNOT4-206ENST00000428680 TCP10Q12799 353 aa8.39□□□□□ -1.07
CNOT4-206ENST00000428680 CRY2Q49AN0 593 aa8.39□□□□□ -1.07
CNOT4-206ENST00000428680 DHX37Q8IY37 1157 aaKnown RBP8.39□□□□□ -1.07
CNOT4-206ENST00000428680 FAM13BQ9NYF5 915 aa8.39□□□□□ -1.07
CNOT4-206ENST00000428680 PODXL2Q9NZ53 605 aa8.39□□□□□ -1.07
CNOT4-206ENST00000428680 ZNRF3Q9ULT6 936 aa8.39□□□□□ -1.07
CNOT4-206ENST00000428680 PDE8AO60658 829 aa8.39□□□□□ -1.07
CNOT4-206ENST00000428680 NOGQ13253 232 aa8.39□□□□□ -1.07
CNOT4-206ENST00000428680 SLC4A4Q9Y6R1 1079 aa8.39□□□□□ -1.07
CNOT4-206ENST00000428680 ALDH1L1O75891 902 aa8.39□□□□□ -1.07
CNOT4-206ENST00000428680 CIAPIN1Q6FI81 312 aa8.39□□□□□ -1.07
CNOT4-206ENST00000428680 SASS6Q6UVJ0 657 aa8.39□□□□□ -1.07
CNOT4-206ENST00000428680 KIAA0825Q8IV33 1275 aa8.39□□□□□ -1.07
CNOT4-206ENST00000428680 SYNE4Q8N205 404 aa8.39□□□□□ -1.07
CNOT4-206ENST00000428680 KINO60870 393 aaKnown RBP8.39□□□□□ -1.07
CNOT4-206ENST00000428680 ZBED4O75132 1171 aa8.39□□□□□ -1.07
CNOT4-206ENST00000428680 KCNQ4P56696 695 aa8.39□□□□□ -1.07
CNOT4-206ENST00000428680 CCDC117Q8IWD4 279 aaPredicted RBP8.39□□□□□ -1.07
CNOT4-206ENST00000428680 BICD1Q96G01 975 aa8.39□□□□□ -1.07
CNOT4-206ENST00000428680 ATP6V0A2Q9Y487 856 aa8.39□□□□□ -1.07
CNOT4-206ENST00000428680 SPDYE3A6NKU9 549 aa8.38□□□□□ -1.07
CNOT4-206ENST00000428680 ATP2B4P23634 1241 aa8.38□□□□□ -1.07
CNOT4-206ENST00000428680 DEFB115Q30KQ5 88 aa8.38□□□□□ -1.07
CNOT4-206ENST00000428680 PLBD2Q8NHP8 589 aa8.38□□□□□ -1.07
CNOT4-206ENST00000428680 TEKT1Q969V4 418 aa8.38□□□□□ -1.07
CNOT4-206ENST00000428680 KDM3BQ7LBC6 1761 aa8.38□□□□□ -1.07
CNOT4-206ENST00000428680 MAGEB6P1A0A0J9YX57 407 aa8.38□□□□□ -1.07
CNOT4-206ENST00000428680 GNAQP50148 359 aa8.38□□□□□ -1.07
CNOT4-206ENST00000428680 CEBPZQ03701 1054 aaKnown RBP8.38□□□□□ -1.07
CNOT4-206ENST00000428680 DOK7Q18PE1 504 aa8.38□□□□□ -1.07
CNOT4-206ENST00000428680 SLC9C2Q5TAH2 1124 aa8.38□□□□□ -1.07
CNOT4-206ENST00000428680 CDC37L1Q7L3B6 337 aa8.38□□□□□ -1.07
CNOT4-206ENST00000428680 CPXCR1Q8N123 301 aa8.38□□□□□ -1.07
CNOT4-206ENST00000428680 ESR2Q92731 530 aa8.38□□□□□ -1.07
CNOT4-206ENST00000428680 CDCA7LQ96GN5 454 aa8.38□□□□□ -1.07
CNOT4-206ENST00000428680 DDX21Q9NR30 783 aaKnown RBP eCLIP8.38□□□□□ -1.07
CNOT4-206ENST00000428680 TTF2Q9UNY4 1162 aaKnown RBP8.38□□□□□ -1.07
CNOT4-206ENST00000428680 FZD9O00144 591 aa8.38□□□□□ -1.07
CNOT4-206ENST00000428680 INHBEP58166 350 aa8.38□□□□□ -1.07
CNOT4-206ENST00000428680 MKRN3Q13064 507 aaKnown RBP8.38□□□□□ -1.07
CNOT4-206ENST00000428680 CCDC181Q5TID7 509 aa8.38□□□□□ -1.07
CNOT4-206ENST00000428680 CCAR2Q8N163 923 aaKnown RBP8.38□□□□□ -1.07
CNOT4-206ENST00000428680 FER1L6Q2WGJ9 1857 aa8.38□□□□□ -1.07
CNOT4-206ENST00000428680 THSD7BQ9C0I4 1608 aa8.38□□□□□ -1.07
CNOT4-206ENST00000428680 ZFYP08048 801 aaPredicted RBP8.38□□□□□ -1.07
CNOT4-206ENST00000428680 BRPF1P55201 1214 aaPredicted RBP8.38□□□□□ -1.07
CNOT4-206ENST00000428680 SREBF2Q12772 1141 aa8.38□□□□□ -1.07
CNOT4-206ENST00000428680 GRAPQ13588 217 aa8.38□□□□□ -1.07
CNOT4-206ENST00000428680 FILIP1LQ4L180 1135 aa8.38□□□□□ -1.07
CNOT4-206ENST00000428680 DPP9Q86TI2 863 aa8.38□□□□□ -1.07
CNOT4-206ENST00000428680 AGBL3Q8NEM8 1001 aa8.38□□□□□ -1.07
CNOT4-206ENST00000428680 GRAPLQ8TC17 118 aaPredicted RBP8.38□□□□□ -1.07
CNOT4-206ENST00000428680 TAF1DQ9H5J8 278 aaPredicted RBP8.38□□□□□ -1.07
CNOT4-206ENST00000428680 C6orf50Q9HD87 102 aa8.38□□□□□ -1.07
CNOT4-206ENST00000428680 SEPT11Q9NVA2 429 aaKnown RBP8.38□□□□□ -1.07
CNOT4-206ENST00000428680 DDX49Q9Y6V7 483 aaKnown RBP8.38□□□□□ -1.07
CNOT4-206ENST00000428680 KCNA3P22001 575 aa8.37□□□□□ -1.07
CNOT4-206ENST00000428680 HOXD10P28358 340 aa8.37□□□□□ -1.07
CNOT4-206ENST00000428680 FKBP1AP62942 108 aaKnown RBP8.37□□□□□ -1.07
CNOT4-206ENST00000428680 TTLL5Q6EMB2 1281 aa8.37□□□□□ -1.07
CNOT4-206ENST00000428680 NSMFQ6X4W1 530 aa8.37□□□□□ -1.07
CNOT4-206ENST00000428680 JAKMIP1Q96N16 626 aaKnown RBP8.37□□□□□ -1.07
CNOT4-206ENST00000428680 PTPRCP08575 1304 aa8.37□□□□□ -1.07
CNOT4-206ENST00000428680 RTL9Q8NET4 1388 aa8.37□□□□□ -1.07
CNOT4-206ENST00000428680 KIF4AO95239 1232 aa8.37□□□□□ -1.07
CNOT4-206ENST00000428680 IREB2P48200 963 aaKnown RBP8.37□□□□□ -1.07
CNOT4-206ENST00000428680 APBB1IPQ7Z5R6 666 aaPredicted RBP8.37□□□□□ -1.07
CNOT4-206ENST00000428680 PDGFDQ9GZP0 370 aaPredicted RBP8.37□□□□□ -1.07
CNOT4-206ENST00000428680 ECHDC1Q9NTX5 307 aa8.37□□□□□ -1.07
CNOT4-206ENST00000428680 SRP68Q9UHB9 627 aaKnown RBP8.37□□□□□ -1.07
CNOT4-206ENST00000428680 TMEM67Q5HYA8 995 aa8.37□□□□□ -1.07
CNOT4-206ENST00000428680 STXBP4Q6ZWJ1 553 aa8.37□□□□□ -1.07
CNOT4-206ENST00000428680 AFDNP55196 1824 aaKnown RBP8.36□□□□□ -1.07
CNOT4-206ENST00000428680 VIRMAQ69YN4 1812 aaKnown RBP8.36□□□□□ -1.07
CNOT4-206ENST00000428680 GOLGA8AA7E2F4 631 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 408.9 ms