RNA–Protein interactions for RNA: ENST00000428214.5

PEX1-203, Transcript of peroxisomal biogenesis factor 1, humanhuman

TSL 1 (best) BASIC

Gene PEX1, Length 3,681 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1-203ENST00000428214 C2CD5Q86YS7 1000 aa13.21□□□□□ -0.29
PEX1-203ENST00000428214 ZBTB7AO95365 584 aa13.21□□□□□ -0.29
PEX1-203ENST00000428214 LRRFIP1Q32MZ4 808 aaKnown RBP13.21□□□□□ -0.29
PEX1-203ENST00000428214 GTF3C6Q969F1 213 aa13.21□□□□□ -0.29
PEX1-203ENST00000428214 CRAMP1Q96RY5 1269 aa13.21□□□□□ -0.3
PEX1-203ENST00000428214 DBNDD1Q9H9R9 158 aa13.21□□□□□ -0.3
PEX1-203ENST00000428214 CWC22Q9HCG8 908 aaKnown RBP13.21□□□□□ -0.3
PEX1-203ENST00000428214 STK32BQ9NY57 414 aa13.21□□□□□ -0.3
PEX1-203ENST00000428214 LEMD3Q9Y2U8 911 aa13.21□□□□□ -0.3
PEX1-203ENST00000428214 TOMM22Q9NS69 142 aa13.2□□□□□ -0.3
PEX1-203ENST00000428214 ZSWIM5Q9P217 1185 aa13.2□□□□□ -0.3
PEX1-203ENST00000428214 HPS5Q9UPZ3 1129 aa13.2□□□□□ -0.3
PEX1-203ENST00000428214 ATP6V0A2Q9Y487 856 aa13.2□□□□□ -0.3
PEX1-203ENST00000428214 VPS37CA5D8V6 355 aaPredicted RBP13.2□□□□□ -0.3
PEX1-203ENST00000428214 BBOX1O75936 387 aa13.2□□□□□ -0.3
PEX1-203ENST00000428214 PDIA3P30101 505 aaKnown RBP13.2□□□□□ -0.3
PEX1-203ENST00000428214 GTF2IP78347 998 aa13.2□□□□□ -0.3
PEX1-203ENST00000428214 CERS5Q8N5B7 392 aa13.2□□□□□ -0.3
PEX1-203ENST00000428214 SH3RF3Q8TEJ3 882 aaPredicted RBP13.2□□□□□ -0.3
PEX1-203ENST00000428214 SCN9AQ15858 1988 aa13.2□□□□□ -0.3
PEX1-203ENST00000428214 RGPD3A6NKT7 1758 aaPredicted RBP13.2□□□□□ -0.3
PEX1-203ENST00000428214 RGPD4Q7Z3J3 1758 aa13.2□□□□□ -0.3
PEX1-203ENST00000428214 TRAK2O60296 914 aa13.2□□□□□ -0.3
PEX1-203ENST00000428214 CCDC88AQ3V6T2 1871 aa13.19□□□□□ -0.3
PEX1-203ENST00000428214 NMT2O60551 498 aa13.19□□□□□ -0.3
PEX1-203ENST00000428214 DEKP35659 375 aaKnown RBP13.19□□□□□ -0.3
PEX1-203ENST00000428214 CMTR1Q8N1G2 835 aaKnown RBP13.19□□□□□ -0.3
PEX1-203ENST00000428214 PRPF40AO75400 957 aaKnown RBP13.19□□□□□ -0.3
PEX1-203ENST00000428214 USP17L8P0C7I0 530 aa13.19□□□□□ -0.3
PEX1-203ENST00000428214 GUCY1B3Q02153 619 aa13.19□□□□□ -0.3
PEX1-203ENST00000428214 OTUD7BQ6GQQ9 843 aa13.19□□□□□ -0.3
PEX1-203ENST00000428214 DZIP1Q86YF9 867 aaKnown RBP13.19□□□□□ -0.3
PEX1-203ENST00000428214 AGXT2Q9BYV1 514 aa13.19□□□□□ -0.3
PEX1-203ENST00000428214 CTNNA3Q9UI47 895 aa13.19□□□□□ -0.3
PEX1-203ENST00000428214 MTMR6Q9Y217 621 aa13.19□□□□□ -0.3
PEX1-203ENST00000428214 STX6O43752 255 aa13.19□□□□□ -0.3
PEX1-203ENST00000428214 NPR1P16066 1061 aa13.19□□□□□ -0.3
PEX1-203ENST00000428214 KLF18A0A0U1RQI7 1052 aa13.18□□□□□ -0.3
PEX1-203ENST00000428214 USP17L12C9JPN9 530 aa13.18□□□□□ -0.3
PEX1-203ENST00000428214 USP17L21D6R901 530 aa13.18□□□□□ -0.3
PEX1-203ENST00000428214 NUCB2P80303 420 aa13.18□□□□□ -0.3
PEX1-203ENST00000428214 MFSD14BQ5SR56 506 aa13.18□□□□□ -0.3
PEX1-203ENST00000428214 NCOA7Q8NI08 942 aa13.18□□□□□ -0.3
PEX1-203ENST00000428214 AIFM3Q96NN9 605 aa13.18□□□□□ -0.3
PEX1-203ENST00000428214 GADD45BO75293 160 aaPredicted RBP13.18□□□□□ -0.3
PEX1-203ENST00000428214 CTR9Q6PD62 1173 aa13.18□□□□□ -0.3
PEX1-203ENST00000428214 ZNF804AQ7Z570 1209 aa13.18□□□□□ -0.3
PEX1-203ENST00000428214 PODXL2Q9NZ53 605 aa13.18□□□□□ -0.3
PEX1-203ENST00000428214 CNPY2Q9Y2B0 182 aa13.18□□□□□ -0.3
PEX1-203ENST00000428214 ATF5Q9Y2D1 282 aaPredicted RBP13.18□□□□□ -0.3
PEX1-203ENST00000428214 BAZ2BQ9UIF8 2168 aaKnown RBP13.18□□□□□ -0.3
PEX1-203ENST00000428214 LDHBP07195 334 aaKnown RBP13.18□□□□□ -0.3
PEX1-203ENST00000428214 PPARAQ07869 468 aa13.18□□□□□ -0.3
PEX1-203ENST00000428214 RALYLQ86SE5 291 aaKnown RBP13.18□□□□□ -0.3
PEX1-203ENST00000428214 SP8Q8IXZ3 490 aa13.18□□□□□ -0.3
PEX1-203ENST00000428214 NSUN7Q8NE18 718 aaKnown RBP13.18□□□□□ -0.3
PEX1-203ENST00000428214 MASTLQ96GX5 879 aa13.18□□□□□ -0.3
PEX1-203ENST00000428214 SH2B1Q9NRF2 756 aaPredicted RBP13.18□□□□□ -0.3
PEX1-203ENST00000428214 RBM27Q9P2N5 1060 aaKnown RBP13.18□□□□□ -0.3
PEX1-203ENST00000428214 ADD1P35611 737 aaKnown RBP13.17□□□□□ -0.3
PEX1-203ENST00000428214 SCNN1DP51172 638 aa13.17□□□□□ -0.3
PEX1-203ENST00000428214 DPP8Q6V1X1 898 aaPredicted RBP13.17□□□□□ -0.3
PEX1-203ENST00000428214 MPNDQ8N594 471 aa13.17□□□□□ -0.3
PEX1-203ENST00000428214 SLC44A5Q8NCS7 719 aa13.17□□□□□ -0.3
PEX1-203ENST00000428214 DYNLL2Q96FJ2 89 aa13.17□□□□□ -0.3
PEX1-203ENST00000428214 LMBRD1Q9NUN5 540 aa13.17□□□□□ -0.3
PEX1-203ENST00000428214 SAP30BPQ9UHR5 308 aaKnown RBP13.17□□□□□ -0.3
PEX1-203ENST00000428214 C21orf2O43822 256 aa13.17□□□□□ -0.3
PEX1-203ENST00000428214 ATP2B4P23634 1241 aa13.17□□□□□ -0.3
PEX1-203ENST00000428214 MCM5P33992 734 aa13.17□□□□□ -0.3
PEX1-203ENST00000428214 GPT2Q8TD30 523 aa13.17□□□□□ -0.3
PEX1-203ENST00000428214 ALDH8A1Q9H2A2 487 aaPredicted RBP13.17□□□□□ -0.3
PEX1-203ENST00000428214 DCP1AQ9NPI6 582 aaPredicted RBP13.17□□□□□ -0.3
PEX1-203ENST00000428214 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.17□□□□□ -0.3
PEX1-203ENST00000428214 CDK5RAP2Q96SN8 1893 aa13.17□□□□□ -0.3
PEX1-203ENST00000428214 GOLGA8BA8MQT2 603 aa13.17□□□□□ -0.3
PEX1-203ENST00000428214 FDPSP14324 419 aaKnown RBP13.17□□□□□ -0.3
PEX1-203ENST00000428214 IL1R1P14778 569 aa13.17□□□□□ -0.3
PEX1-203ENST00000428214 CDC27P30260 824 aa13.17□□□□□ -0.3
PEX1-203ENST00000428214 PDE6BP35913 854 aa13.17□□□□□ -0.3
PEX1-203ENST00000428214 MICU3Q86XE3 530 aa13.17□□□□□ -0.3
PEX1-203ENST00000428214 FLAD1Q8NFF5 587 aa13.17□□□□□ -0.3
PEX1-203ENST00000428214 IGDCC4Q8TDY8 1250 aa13.17□□□□□ -0.3
PEX1-203ENST00000428214 ZSCAN31Q96LW9 406 aaPredicted RBP13.17□□□□□ -0.3
PEX1-203ENST00000428214 BAG6P46379 1132 aa13.16□□□□□ -0.3
PEX1-203ENST00000428214 FAM47AQ5JRC9 791 aa13.16□□□□□ -0.3
PEX1-203ENST00000428214 AKNAD1Q5T1N1 836 aa13.16□□□□□ -0.3
PEX1-203ENST00000428214 PTPDC1A2A3K4 754 aa13.16□□□□□ -0.3
PEX1-203ENST00000428214 SEMA3EO15041 775 aa13.16□□□□□ -0.3
PEX1-203ENST00000428214 PFKFB2O60825 505 aa13.16□□□□□ -0.3
PEX1-203ENST00000428214 ZSCAN22P10073 491 aaPredicted RBP13.16□□□□□ -0.3
PEX1-203ENST00000428214 DNM1Q05193 864 aaKnown RBP13.16□□□□□ -0.3
PEX1-203ENST00000428214 LARP1BQ659C4 914 aaKnown RBP13.16□□□□□ -0.3
PEX1-203ENST00000428214 CCDC82Q8N4S0 544 aa13.16□□□□□ -0.3
PEX1-203ENST00000428214 FTOQ9C0B1 505 aaKnown RBP eCLIP13.16□□□□□ -0.3
PEX1-203ENST00000428214 LY9Q9HBG7 655 aa13.16□□□□□ -0.3
PEX1-203ENST00000428214 SF3B2Q13435 895 aaKnown RBP13.16□□□□□ -0.3
PEX1-203ENST00000428214 ANKRD1Q15327 319 aa13.16□□□□□ -0.3
PEX1-203ENST00000428214 TICAM2Q86XR7 235 aa13.16□□□□□ -0.3
PEX1-203ENST00000428214 MAPKAPK5Q8IW41 473 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms