RNA–Protein interactions for RNA: ENST00000428209.6

PRDM5-203, Transcript of PR/SET domain 5, humanhuman

TSL 1 (best) BASIC

Gene PRDM5, Length 2,338 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM5-203ENST00000428209 SEMA3EO15041 775 aa20.23■□□□□ 0.83
PRDM5-203ENST00000428209 CNBD1Q8NA66 436 aa20.23■□□□□ 0.83
PRDM5-203ENST00000428209 RNF214Q8ND24 703 aa20.23■□□□□ 0.83
PRDM5-203ENST00000428209 IGDCC4Q8TDY8 1250 aa20.23■□□□□ 0.83
PRDM5-203ENST00000428209 KDM4AO75164 1064 aa20.22■□□□□ 0.83
PRDM5-203ENST00000428209 KRT23Q9C075 422 aa20.22■□□□□ 0.83
PRDM5-203ENST00000428209 ZSWIM5Q9P217 1185 aa20.22■□□□□ 0.83
PRDM5-203ENST00000428209 ORC3Q9UBD5 711 aaPredicted RBP20.22■□□□□ 0.83
PRDM5-203ENST00000428209 TMEM67Q5HYA8 995 aa20.22■□□□□ 0.83
PRDM5-203ENST00000428209 TRIM44Q96DX7 344 aaPredicted RBP20.22■□□□□ 0.83
PRDM5-203ENST00000428209 PPP1R9BQ96SB3 815 aa20.22■□□□□ 0.83
PRDM5-203ENST00000428209 EP400Q96L91 3159 aa20.22■□□□□ 0.83
PRDM5-203ENST00000428209 METAP2P50579 478 aaKnown RBP eCLIP20.21■□□□□ 0.83
PRDM5-203ENST00000428209 NFXL1Q6ZNB6 911 aa20.21■□□□□ 0.83
PRDM5-203ENST00000428209 FAM43AQ8N2R8 423 aa20.21■□□□□ 0.83
PRDM5-203ENST00000428209 SDR42E1Q8WUS8 393 aa20.21■□□□□ 0.83
PRDM5-203ENST00000428209 SENP2Q9HC62 589 aa20.21■□□□□ 0.83
PRDM5-203ENST00000428209 TOMM22Q9NS69 142 aa20.21■□□□□ 0.83
PRDM5-203ENST00000428209 TACC3Q9Y6A5 838 aa20.21■□□□□ 0.83
PRDM5-203ENST00000428209 RRP12Q5JTH9 1297 aaKnown RBP20.21■□□□□ 0.83
PRDM5-203ENST00000428209 APOA5Q6Q788 366 aa20.21■□□□□ 0.83
PRDM5-203ENST00000428209 STAG1Q8WVM7 1258 aa20.21■□□□□ 0.83
PRDM5-203ENST00000428209 IFIT3O14879 490 aaKnown RBP20.2■□□□□ 0.82
PRDM5-203ENST00000428209 CEBPZQ03701 1054 aaKnown RBP20.2■□□□□ 0.82
PRDM5-203ENST00000428209 STK11IPQ8N1F8 1099 aa20.2■□□□□ 0.82
PRDM5-203ENST00000428209 C8orf76Q96K31 380 aa20.2■□□□□ 0.82
PRDM5-203ENST00000428209 RIOK1Q9BRS2 568 aaKnown RBP20.2■□□□□ 0.82
PRDM5-203ENST00000428209 LY9Q9HBG7 655 aa20.2■□□□□ 0.82
PRDM5-203ENST00000428209 CHD4Q14839 1912 aa20.2■□□□□ 0.82
PRDM5-203ENST00000428209 LIG1P18858 919 aa20.2■□□□□ 0.82
PRDM5-203ENST00000428209 RXRAP19793 462 aa20.2■□□□□ 0.82
PRDM5-203ENST00000428209 ADD1P35611 737 aaKnown RBP20.2■□□□□ 0.82
PRDM5-203ENST00000428209 GIMAP6Q6P9H5 292 aa20.2■□□□□ 0.82
PRDM5-203ENST00000428209 ZBTB43O43298 467 aa20.19■□□□□ 0.82
PRDM5-203ENST00000428209 LIFRP42702 1097 aa20.19■□□□□ 0.82
PRDM5-203ENST00000428209 PPARAQ07869 468 aa20.19■□□□□ 0.82
PRDM5-203ENST00000428209 GRAPQ13588 217 aa20.19■□□□□ 0.82
PRDM5-203ENST00000428209 KRT27Q7Z3Y8 459 aa20.19■□□□□ 0.82
PRDM5-203ENST00000428209 SGMS1Q86VZ5 419 aa20.19■□□□□ 0.82
PRDM5-203ENST00000428209 MICU3Q86XE3 530 aa20.19■□□□□ 0.82
PRDM5-203ENST00000428209 GRAPLQ8TC17 118 aaPredicted RBP20.19■□□□□ 0.82
PRDM5-203ENST00000428209 ANKIB1Q9P2G1 1089 aa20.19■□□□□ 0.82
PRDM5-203ENST00000428209 TNRC6CQ9HCJ0 1690 aaKnown RBP20.19■□□□□ 0.82
PRDM5-203ENST00000428209 MINDY4BA8MYZ0 360 aa20.19■□□□□ 0.82
PRDM5-203ENST00000428209 TRIM37O94972 964 aa20.19■□□□□ 0.82
PRDM5-203ENST00000428209 DYNLL1P63167 89 aaKnown RBP20.19■□□□□ 0.82
PRDM5-203ENST00000428209 CHAF1AQ13111 956 aaPredicted RBP20.19■□□□□ 0.82
PRDM5-203ENST00000428209 SLC27A3Q5K4L6 730 aa20.19■□□□□ 0.82
PRDM5-203ENST00000428209 PGBD1Q96JS3 809 aa20.19■□□□□ 0.82
PRDM5-203ENST00000428209 ZNF396Q96N95 335 aaPredicted RBP20.19■□□□□ 0.82
PRDM5-203ENST00000428209 RNF41Q9H4P4 317 aaPredicted RBP20.19■□□□□ 0.82
PRDM5-203ENST00000428209 CACNA1SQ13698 1873 aa20.19■□□□□ 0.82
PRDM5-203ENST00000428209 OTUD7BQ6GQQ9 843 aa20.18■□□□□ 0.82
PRDM5-203ENST00000428209 PRR5LQ6MZQ0 368 aa20.18■□□□□ 0.82
PRDM5-203ENST00000428209 CPLX2Q6PUV4 134 aaKnown RBP20.18■□□□□ 0.82
PRDM5-203ENST00000428209 TXNRD3Q86VQ6 643 aa20.18■□□□□ 0.82
PRDM5-203ENST00000428209 FBXO18Q8NFZ0 1043 aa20.18■□□□□ 0.82
PRDM5-203ENST00000428209 ZNF384Q8TF68 577 aa20.18■□□□□ 0.82
PRDM5-203ENST00000428209 PDS5AQ29RF7 1337 aaKnown RBP20.18■□□□□ 0.82
PRDM5-203ENST00000428209 CCDC69A6NI79 296 aa20.18■□□□□ 0.82
PRDM5-203ENST00000428209 CDKL5O76039 1030 aa20.18■□□□□ 0.82
PRDM5-203ENST00000428209 GYS1P13807 737 aa20.18■□□□□ 0.82
PRDM5-203ENST00000428209 ATL3Q6DD88 541 aa20.18■□□□□ 0.82
PRDM5-203ENST00000428209 CCDC144CPQ8IYA2 1237 aa20.18■□□□□ 0.82
PRDM5-203ENST00000428209 BICD2Q8TD16 824 aa20.18■□□□□ 0.82
PRDM5-203ENST00000428209 NSUN4Q96CB9 384 aaKnown RBP20.18■□□□□ 0.82
PRDM5-203ENST00000428209 SLC12A7Q9Y666 1083 aa20.18■□□□□ 0.82
PRDM5-203ENST00000428209 TIAM2Q8IVF5 1701 aa20.17■□□□□ 0.82
PRDM5-203ENST00000428209 MECOMQ03112 1051 aa20.17■□□□□ 0.82
PRDM5-203ENST00000428209 SART3Q15020 963 aaKnown RBP20.17■□□□□ 0.82
PRDM5-203ENST00000428209 CDC27P30260 824 aa20.16■□□□□ 0.82
PRDM5-203ENST00000428209 ILDR1Q86SU0 546 aaPredicted RBP20.16■□□□□ 0.82
PRDM5-203ENST00000428209 KLHL34Q8N239 644 aa20.16■□□□□ 0.82
PRDM5-203ENST00000428209 USP28Q96RU2 1077 aa20.16■□□□□ 0.82
PRDM5-203ENST00000428209 MYL10Q9BUA6 226 aa20.16■□□□□ 0.82
PRDM5-203ENST00000428209 FTOQ9C0B1 505 aaKnown RBP eCLIP20.16■□□□□ 0.82
PRDM5-203ENST00000428209 DACT1Q9NYF0 836 aa20.16■□□□□ 0.82
PRDM5-203ENST00000428209 RCOR1Q9UKL0 485 aa20.16■□□□□ 0.82
PRDM5-203ENST00000428209 GOLGA8AA7E2F4 631 aa20.16■□□□□ 0.82
PRDM5-203ENST00000428209 SYNE3Q6ZMZ3 975 aa20.16■□□□□ 0.82
PRDM5-203ENST00000428209 RPGRQ92834 1020 aaKnown RBP20.16■□□□□ 0.82
PRDM5-203ENST00000428209 ZKSCAN3Q9BRR0 538 aa20.16■□□□□ 0.82
PRDM5-203ENST00000428209 NUP62CLQ9H1M0 184 aa20.16■□□□□ 0.82
PRDM5-203ENST00000428209 MYH15Q9Y2K3 1946 aa20.16■□□□□ 0.82
PRDM5-203ENST00000428209 UBR3Q6ZT12 1888 aa20.16■□□□□ 0.82
PRDM5-203ENST00000428209 MYH13Q9UKX3 1938 aa20.15■□□□□ 0.82
PRDM5-203ENST00000428209 ERICH2A1L162 156 aa20.15■□□□□ 0.82
PRDM5-203ENST00000428209 RBM6P78332 1123 aaKnown RBP20.15■□□□□ 0.82
PRDM5-203ENST00000428209 ANAPC4Q9UJX5 808 aa20.15■□□□□ 0.82
PRDM5-203ENST00000428209 LEMD3Q9Y2U8 911 aa20.15■□□□□ 0.82
PRDM5-203ENST00000428209 SERPINB2P05120 415 aa20.15■□□□□ 0.82
PRDM5-203ENST00000428209 PRDX5P30044 214 aa20.15■□□□□ 0.82
PRDM5-203ENST00000428209 WTAPQ15007 396 aa20.15■□□□□ 0.82
PRDM5-203ENST00000428209 CAMK4Q16566 473 aa20.15■□□□□ 0.82
PRDM5-203ENST00000428209 GJB4Q9NTQ9 266 aa20.15■□□□□ 0.82
PRDM5-203ENST00000428209 ST5P78524 1137 aa20.14■□□□□ 0.82
PRDM5-203ENST00000428209 PHKBQ93100 1093 aa20.14■□□□□ 0.82
PRDM5-203ENST00000428209 BRIP1Q9BX63 1249 aa20.14■□□□□ 0.82
PRDM5-203ENST00000428209 JAG2Q9Y219 1238 aa20.14■□□□□ 0.82
PRDM5-203ENST00000428209 SLC51AQ86UW1 340 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms