RNA–Protein interactions for RNA: ENST00000427862.1

GCFC2-203, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 3

Gene GCFC2, Length 632 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-203ENST00000427862 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.97□□□□□ -1.13
GCFC2-203ENST00000427862 SAMM50Q9Y512 469 aa7.97□□□□□ -1.13
GCFC2-203ENST00000427862 EIF4EBP3O60516 100 aaPredicted RBP7.96□□□□□ -1.14
GCFC2-203ENST00000427862 ALX3O95076 343 aa7.96□□□□□ -1.14
GCFC2-203ENST00000427862 LIG1P18858 919 aa7.96□□□□□ -1.14
GCFC2-203ENST00000427862 EIF4A3P38919 411 aaKnown RBP7.96□□□□□ -1.14
GCFC2-203ENST00000427862 FAM160A1Q05DH4 1040 aa7.96□□□□□ -1.14
GCFC2-203ENST00000427862 LRRC14Q15048 493 aa7.96□□□□□ -1.14
GCFC2-203ENST00000427862 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.96□□□□□ -1.14
GCFC2-203ENST00000427862 TMEM130Q8N3G9 435 aa7.96□□□□□ -1.14
GCFC2-203ENST00000427862 GPBAR1Q8TDU6 330 aa7.96□□□□□ -1.14
GCFC2-203ENST00000427862 GAL3ST3Q96A11 431 aa7.96□□□□□ -1.14
GCFC2-203ENST00000427862 LENG1Q96BZ8 264 aaPredicted RBP7.96□□□□□ -1.14
GCFC2-203ENST00000427862 TMPRSS13Q9BYE2 586 aa7.96□□□□□ -1.14
GCFC2-203ENST00000427862 TGIF2Q9GZN2 237 aa7.96□□□□□ -1.14
GCFC2-203ENST00000427862 ACBD3Q9H3P7 528 aa7.96□□□□□ -1.14
GCFC2-203ENST00000427862 KCNQ5Q9NR82 932 aa7.96□□□□□ -1.14
GCFC2-203ENST00000427862 KRBA1A5PL33 1030 aa7.95□□□□□ -1.14
GCFC2-203ENST00000427862 MEGF11A6BM72 1044 aa7.95□□□□□ -1.14
GCFC2-203ENST00000427862 F8W735 103 aaPredicted RBP7.95□□□□□ -1.14
GCFC2-203ENST00000427862 GREM1O60565 184 aa7.95□□□□□ -1.14
GCFC2-203ENST00000427862 TRIM37O94972 964 aa7.95□□□□□ -1.14
GCFC2-203ENST00000427862 PWP1Q13610 501 aa7.95□□□□□ -1.14
GCFC2-203ENST00000427862 SEPT6Q14141 434 aa7.95□□□□□ -1.14
GCFC2-203ENST00000427862 EXOSC6Q5RKV6 272 aaKnown RBP7.95□□□□□ -1.14
GCFC2-203ENST00000427862 AGGF1Q8N302 714 aaeCLIP7.95□□□□□ -1.14
GCFC2-203ENST00000427862 MRPL18Q9H0U6 180 aaKnown RBP7.95□□□□□ -1.14
GCFC2-203ENST00000427862 KRT82Q9NSB4 513 aa7.95□□□□□ -1.14
GCFC2-203ENST00000427862 CDK8P49336 464 aa7.94□□□□□ -1.14
GCFC2-203ENST00000427862 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.94□□□□□ -1.14
GCFC2-203ENST00000427862 BNC2Q6ZN30 1099 aaPredicted RBP7.94□□□□□ -1.14
GCFC2-203ENST00000427862 ACAD11Q709F0 780 aa7.94□□□□□ -1.14
GCFC2-203ENST00000427862 TRIM42Q8IWZ5 723 aa7.94□□□□□ -1.14
GCFC2-203ENST00000427862 ZNF654Q8IZM8 581 aa7.94□□□□□ -1.14
GCFC2-203ENST00000427862 DCAF11Q8TEB1 546 aa7.94□□□□□ -1.14
GCFC2-203ENST00000427862 ZNF296Q8WUU4 475 aaPredicted RBP7.94□□□□□ -1.14
GCFC2-203ENST00000427862 RUSC1Q9BVN2 902 aa7.94□□□□□ -1.14
GCFC2-203ENST00000427862 PCDHGC5Q9Y5F6 944 aa7.94□□□□□ -1.14
GCFC2-203ENST00000427862 FAM221AA4D161 298 aa7.93□□□□□ -1.14
GCFC2-203ENST00000427862 TNNI2P48788 182 aa7.93□□□□□ -1.14
GCFC2-203ENST00000427862 KIF4BQ2VIQ3 1234 aa7.93□□□□□ -1.14
GCFC2-203ENST00000427862 SCARA3Q6AZY7 606 aa7.93□□□□□ -1.14
GCFC2-203ENST00000427862 TMEM151AQ8N4L1 468 aa7.93□□□□□ -1.14
GCFC2-203ENST00000427862 GOLM1Q8NBJ4 401 aa7.93□□□□□ -1.14
GCFC2-203ENST00000427862 JARID2Q92833 1246 aaPredicted RBP7.93□□□□□ -1.14
GCFC2-203ENST00000427862 EAF1Q96JC9 268 aaPredicted RBP7.93□□□□□ -1.14
GCFC2-203ENST00000427862 DCAF5Q96JK2 942 aa7.93□□□□□ -1.14
GCFC2-203ENST00000427862 WDR18Q9BV38 432 aa7.93□□□□□ -1.14
GCFC2-203ENST00000427862 C9orf172C9J069 976 aa7.92□□□□□ -1.14
GCFC2-203ENST00000427862 AOC2O75106 756 aa7.92□□□□□ -1.14
GCFC2-203ENST00000427862 F13A1P00488 732 aa7.92□□□□□ -1.14
GCFC2-203ENST00000427862 PDE3AQ14432 1141 aa7.92□□□□□ -1.14
GCFC2-203ENST00000427862 CCDC84Q86UT8 332 aaPredicted RBP7.92□□□□□ -1.14
GCFC2-203ENST00000427862 FBXO27Q8NI29 283 aa7.92□□□□□ -1.14
GCFC2-203ENST00000427862 MIR1-1HGQ9H1L0 117 aa7.92□□□□□ -1.14
GCFC2-203ENST00000427862 PPP1R9AQ9ULJ8 1098 aa7.92□□□□□ -1.14
GCFC2-203ENST00000427862 NOS3P29474 1203 aa7.91□□□□□ -1.14
GCFC2-203ENST00000427862 ADGRE1Q14246 886 aa7.91□□□□□ -1.14
GCFC2-203ENST00000427862 INPP5AQ14642 412 aa7.91□□□□□ -1.14
GCFC2-203ENST00000427862 ALYREFQ86V81 257 aaKnown RBP7.91□□□□□ -1.14
GCFC2-203ENST00000427862 SMG8Q8ND04 991 aaKnown RBP7.91□□□□□ -1.14
GCFC2-203ENST00000427862 WFDC12Q8WWY7 111 aa7.91□□□□□ -1.14
GCFC2-203ENST00000427862 SPON2Q9BUD6 331 aa7.91□□□□□ -1.14
GCFC2-203ENST00000427862 SYNGAP1Q96PV0 1343 aa7.9□□□□□ -1.14
GCFC2-203ENST00000427862 CILPO75339 1184 aa7.9□□□□□ -1.14
GCFC2-203ENST00000427862 GDF11O95390 407 aa7.9□□□□□ -1.14
GCFC2-203ENST00000427862 APBA3O96018 575 aa7.9□□□□□ -1.14
GCFC2-203ENST00000427862 ITGB2P05107 769 aa7.9□□□□□ -1.14
GCFC2-203ENST00000427862 DRD2P14416 443 aa7.9□□□□□ -1.14
GCFC2-203ENST00000427862 CHRNA4P43681 627 aa7.9□□□□□ -1.14
GCFC2-203ENST00000427862 CRKP46108 304 aa7.9□□□□□ -1.14
GCFC2-203ENST00000427862 IREB2P48200 963 aaKnown RBP7.9□□□□□ -1.14
GCFC2-203ENST00000427862 PAK2Q13177 524 aa7.9□□□□□ -1.14
GCFC2-203ENST00000427862 MBTPS1Q14703 1052 aa7.9□□□□□ -1.14
GCFC2-203ENST00000427862 ZC3H12AQ5D1E8 599 aaKnown RBP7.9□□□□□ -1.14
GCFC2-203ENST00000427862 Q6ZS46 218 aa7.9□□□□□ -1.14
GCFC2-203ENST00000427862 FAM196AQ6ZSG2 479 aa7.9□□□□□ -1.14
GCFC2-203ENST00000427862 CD163Q86VB7 1156 aa7.9□□□□□ -1.14
GCFC2-203ENST00000427862 GATAD2BQ8WXI9 593 aa7.9□□□□□ -1.14
GCFC2-203ENST00000427862 RNF208Q9H0X6 261 aa7.9□□□□□ -1.14
GCFC2-203ENST00000427862 AKTIPQ9H8T0 292 aa7.9□□□□□ -1.14
GCFC2-203ENST00000427862 SUGCTQ9HAC7 445 aa7.9□□□□□ -1.14
GCFC2-203ENST00000427862 UBP1Q9NZI7 540 aa7.9□□□□□ -1.14
GCFC2-203ENST00000427862 USP21Q9UK80 565 aa7.9□□□□□ -1.14
GCFC2-203ENST00000427862 PCDHA4Q9UN74 947 aa7.9□□□□□ -1.14
GCFC2-203ENST00000427862 GFRA2O00451 464 aa7.89□□□□□ -1.15
GCFC2-203ENST00000427862 TIAF1O95411 115 aa7.89□□□□□ -1.15
GCFC2-203ENST00000427862 RASSF7Q02833 373 aa7.89□□□□□ -1.15
GCFC2-203ENST00000427862 SNAP47Q5SQN1 464 aa7.89□□□□□ -1.15
GCFC2-203ENST00000427862 KIAA0825Q8IV33 1275 aa7.89□□□□□ -1.15
GCFC2-203ENST00000427862 UBL7Q96S82 380 aaPredicted RBP7.89□□□□□ -1.15
GCFC2-203ENST00000427862 TINF2Q9BSI4 451 aa7.89□□□□□ -1.15
GCFC2-203ENST00000427862 NT5C1AQ9BXI3 368 aa7.89□□□□□ -1.15
GCFC2-203ENST00000427862 SUPT16HQ9Y5B9 1047 aaKnown RBP7.89□□□□□ -1.15
GCFC2-203ENST00000427862 C1QTNF9BB2RNN3 333 aa7.88□□□□□ -1.15
GCFC2-203ENST00000427862 RNF225M0QZC1 329 aaPredicted RBP7.88□□□□□ -1.15
GCFC2-203ENST00000427862 TMPRSS2O15393 492 aa7.88□□□□□ -1.15
GCFC2-203ENST00000427862 NRG1Q02297 640 aaPredicted RBP7.88□□□□□ -1.15
GCFC2-203ENST00000427862 RING1Q06587 406 aa7.88□□□□□ -1.15
GCFC2-203ENST00000427862 SOX4Q06945 474 aaPredicted RBP7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms