RNA–Protein interactions for RNA: ENST00000427447.5

LINC00649-203, long intergenic non-protein coding RNA 649, humanhuman

TSL 1 (best) BASIC

Gene LINC00649, Length 9,124 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-203ENST00000427447 ZNF354CQ86Y25 554 aa8.69□□□□□ -1.02
LINC00649-203ENST00000427447 ZC3H15Q8WU90 426 aaKnown RBP8.69□□□□□ -1.02
LINC00649-203ENST00000427447 TEKT4Q8WW24 435 aa8.69□□□□□ -1.02
LINC00649-203ENST00000427447 PSPC1Q8WXF1 523 aaKnown RBP8.69□□□□□ -1.02
LINC00649-203ENST00000427447 SLC24A3Q9HC58 644 aa8.69□□□□□ -1.02
LINC00649-203ENST00000427447 ZNF330Q9Y3S2 320 aaPredicted RBP8.69□□□□□ -1.02
LINC00649-203ENST00000427447 SERPINB10P48595 397 aa8.69□□□□□ -1.02
LINC00649-203ENST00000427447 STX1BP61266 288 aa8.69□□□□□ -1.02
LINC00649-203ENST00000427447 CUL4BQ13620 913 aa8.69□□□□□ -1.02
LINC00649-203ENST00000427447 KIAA0753Q2KHM9 967 aa8.69□□□□□ -1.02
LINC00649-203ENST00000427447 PIP4K2CQ8TBX8 421 aa8.69□□□□□ -1.02
LINC00649-203ENST00000427447 SYBUQ9NX95 663 aa8.69□□□□□ -1.02
LINC00649-203ENST00000427447 DSEQ9UL01 958 aa8.69□□□□□ -1.02
LINC00649-203ENST00000427447 PAK3O75914 559 aaPredicted RBP8.68□□□□□ -1.02
LINC00649-203ENST00000427447 KANK4Q5T7N3 995 aaPredicted RBP8.68□□□□□ -1.02
LINC00649-203ENST00000427447 LSM14BQ9BX40 385 aaKnown RBP8.68□□□□□ -1.02
LINC00649-203ENST00000427447 RCN1Q15293 331 aa8.68□□□□□ -1.02
LINC00649-203ENST00000427447 SPOUT1Q5T280 376 aaKnown RBP8.68□□□□□ -1.02
LINC00649-203ENST00000427447 GNL3LQ9NVN8 582 aaKnown RBP8.68□□□□□ -1.02
LINC00649-203ENST00000427447 A0A0B4J269 797 aa8.68□□□□□ -1.02
LINC00649-203ENST00000427447 ZBTB39O15060 712 aa8.68□□□□□ -1.02
LINC00649-203ENST00000427447 COPB1P53618 953 aaKnown RBP8.68□□□□□ -1.02
LINC00649-203ENST00000427447 TUBB3Q13509 450 aa8.68□□□□□ -1.02
LINC00649-203ENST00000427447 VPS53Q5VIR6 699 aa8.68□□□□□ -1.02
LINC00649-203ENST00000427447 VSIG1Q86XK7 387 aa8.68□□□□□ -1.02
LINC00649-203ENST00000427447 UACAQ9BZF9 1416 aa8.68□□□□□ -1.02
LINC00649-203ENST00000427447 HPS1Q92902 700 aa8.68□□□□□ -1.02
LINC00649-203ENST00000427447 MYBBP1AQ9BQG0 1328 aaKnown RBP8.68□□□□□ -1.02
LINC00649-203ENST00000427447 AP1S2P56377 157 aa8.68□□□□□ -1.02
LINC00649-203ENST00000427447 IFT20Q8IY31 132 aa8.68□□□□□ -1.02
LINC00649-203ENST00000427447 RGS22Q8NE09 1264 aa8.68□□□□□ -1.02
LINC00649-203ENST00000427447 TCHHQ07283 1943 aa8.68□□□□□ -1.02
LINC00649-203ENST00000427447 SCAPERQ9BY12 1400 aa8.68□□□□□ -1.02
LINC00649-203ENST00000427447 TOP2AP11388 1531 aaKnown RBP8.68□□□□□ -1.02
LINC00649-203ENST00000427447 TBKBP1A7MCY6 615 aa8.68□□□□□ -1.02
LINC00649-203ENST00000427447 KLHL31Q9H511 634 aa8.68□□□□□ -1.02
LINC00649-203ENST00000427447 IL1RAPL2Q9NP60 686 aa8.68□□□□□ -1.02
LINC00649-203ENST00000427447 MAP3K20Q9NYL2 800 aaKnown RBP8.68□□□□□ -1.02
LINC00649-203ENST00000427447 CCDC18Q5T9S5 1454 aa8.68□□□□□ -1.02
LINC00649-203ENST00000427447 ATP8B1O43520 1251 aa8.68□□□□□ -1.02
LINC00649-203ENST00000427447 YEATS4O95619 227 aa8.68□□□□□ -1.02
LINC00649-203ENST00000427447 ANKRD20A4Q4UJ75 823 aa8.68□□□□□ -1.02
LINC00649-203ENST00000427447 ANKRD20A8PQ5CZ79 823 aa8.68□□□□□ -1.02
LINC00649-203ENST00000427447 ANKRD20A2Q5SQ80 823 aa8.68□□□□□ -1.02
LINC00649-203ENST00000427447 ANKRD20A1Q5TYW2 823 aa8.68□□□□□ -1.02
LINC00649-203ENST00000427447 RRP1P56182 461 aaKnown RBP8.67□□□□□ -1.02
LINC00649-203ENST00000427447 LARP1BQ659C4 914 aaKnown RBP8.67□□□□□ -1.02
LINC00649-203ENST00000427447 IPPQ9Y573 584 aa8.67□□□□□ -1.02
LINC00649-203ENST00000427447 IDH3BO43837 385 aa8.67□□□□□ -1.02
LINC00649-203ENST00000427447 TRPC1P48995 793 aa8.67□□□□□ -1.02
LINC00649-203ENST00000427447 PLEKHH1Q9ULM0 1364 aa8.67□□□□□ -1.02
LINC00649-203ENST00000427447 CYLC2Q14093 348 aaPredicted RBP8.67□□□□□ -1.02
LINC00649-203ENST00000427447 NOP53Q9NZM5 478 aaKnown RBP8.67□□□□□ -1.02
LINC00649-203ENST00000427447 CCNCP24863 283 aa8.67□□□□□ -1.02
LINC00649-203ENST00000427447 LAMB3Q13751 1172 aa8.67□□□□□ -1.02
LINC00649-203ENST00000427447 TSGA10Q9BZW7 698 aa8.67□□□□□ -1.02
LINC00649-203ENST00000427447 PHF8Q9UPP1 1060 aa8.67□□□□□ -1.02
LINC00649-203ENST00000427447 NBPF26B4DH59 902 aa8.67□□□□□ -1.02
LINC00649-203ENST00000427447 NBPF14Q5TI25 921 aa8.67□□□□□ -1.02
LINC00649-203ENST00000427447 NBPF15Q8N660 670 aa8.67□□□□□ -1.02
LINC00649-203ENST00000427447 SMIM23A6NLE4 172 aa8.67□□□□□ -1.02
LINC00649-203ENST00000427447 TNNC2P02585 160 aa8.67□□□□□ -1.02
LINC00649-203ENST00000427447 CRYMQ14894 314 aa8.67□□□□□ -1.02
LINC00649-203ENST00000427447 CEP85Q6P2H3 762 aa8.67□□□□□ -1.02
LINC00649-203ENST00000427447 AFAP1L2Q8N4X5 818 aa8.67□□□□□ -1.02
LINC00649-203ENST00000427447 COG4Q9H9E3 785 aa8.67□□□□□ -1.02
LINC00649-203ENST00000427447 TFIP11Q9UBB9 837 aaKnown RBP8.67□□□□□ -1.02
LINC00649-203ENST00000427447 KRT2P35908 639 aa8.67□□□□□ -1.02
LINC00649-203ENST00000427447 HHATQ5VTY9 493 aa8.67□□□□□ -1.02
LINC00649-203ENST00000427447 MYLK4Q86YV6 388 aaPredicted RBP8.67□□□□□ -1.02
LINC00649-203ENST00000427447 GNB5O14775 395 aa8.66□□□□□ -1.02
LINC00649-203ENST00000427447 TPP2P29144 1249 aaPredicted RBP8.66□□□□□ -1.02
LINC00649-203ENST00000427447 EVCP57679 992 aa8.66□□□□□ -1.02
LINC00649-203ENST00000427447 MRPS35P82673 323 aaKnown RBP8.66□□□□□ -1.02
LINC00649-203ENST00000427447 PDCLQ13371 301 aa8.66□□□□□ -1.02
LINC00649-203ENST00000427447 PPP4R3AQ6IN85 833 aa8.66□□□□□ -1.02
LINC00649-203ENST00000427447 B3GALT6Q96L58 329 aa8.66□□□□□ -1.02
LINC00649-203ENST00000427447 RPAP3Q9H6T3 665 aaPredicted RBP8.66□□□□□ -1.02
LINC00649-203ENST00000427447 ETAA1Q9NY74 926 aa8.66□□□□□ -1.02
LINC00649-203ENST00000427447 SEPT3Q9UH03 358 aa8.66□□□□□ -1.02
LINC00649-203ENST00000427447 FBXO9Q9UK97 447 aaPredicted RBP8.66□□□□□ -1.02
LINC00649-203ENST00000427447 DEAF1O75398 565 aaPredicted RBP8.66□□□□□ -1.02
LINC00649-203ENST00000427447 COPB2P35606 906 aa8.66□□□□□ -1.02
LINC00649-203ENST00000427447 SNAP25P60880 206 aa8.66□□□□□ -1.02
LINC00649-203ENST00000427447 RNASELQ05823 741 aaKnown RBP8.66□□□□□ -1.02
LINC00649-203ENST00000427447 SPOCK3Q9BQ16 436 aa8.66□□□□□ -1.02
LINC00649-203ENST00000427447 RABL2BQ9UNT1 228 aa8.66□□□□□ -1.02
LINC00649-203ENST00000427447 NLRP13Q86W25 1043 aa8.66□□□□□ -1.02
LINC00649-203ENST00000427447 CEP70Q8NHQ1 597 aa8.66□□□□□ -1.02
LINC00649-203ENST00000427447 NLRP7Q8WX94 980 aa8.66□□□□□ -1.02
LINC00649-203ENST00000427447 ZSCAN31Q96LW9 406 aaPredicted RBP8.66□□□□□ -1.02
LINC00649-203ENST00000427447 THUMPD2Q9BTF0 503 aaKnown RBP8.66□□□□□ -1.02
LINC00649-203ENST00000427447 CHRAC1Q9NRG0 131 aa8.66□□□□□ -1.02
LINC00649-203ENST00000427447 ATP11BQ9Y2G3 1177 aa8.66□□□□□ -1.02
LINC00649-203ENST00000427447 CFAP65Q6ZU64 1925 aaKnown RBP8.66□□□□□ -1.02
LINC00649-203ENST00000427447 ACTN1P12814 892 aa8.66□□□□□ -1.02
LINC00649-203ENST00000427447 HDAC4P56524 1084 aa8.66□□□□□ -1.02
LINC00649-203ENST00000427447 DENND6AQ8IWF6 608 aa8.66□□□□□ -1.02
LINC00649-203ENST00000427447 KIF17Q9P2E2 1029 aa8.66□□□□□ -1.02
LINC00649-203ENST00000427447 A8MXQ7 604 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms