RNA–Protein interactions for RNA: ENST00000427414.2

SH3D19-204, Transcript of SH3 domain containing 19, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SH3D19, Length 2,656 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-204ENST00000427414 FAM163AQ96GL9 167 aaPredicted RBP10.04□□□□□ -0.8
SH3D19-204ENST00000427414 CHAMP1Q96JM3 812 aa10.04□□□□□ -0.8
SH3D19-204ENST00000427414 SEC62Q99442 399 aaKnown RBP10.04□□□□□ -0.8
SH3D19-204ENST00000427414 RNF41Q9H4P4 317 aaPredicted RBP10.04□□□□□ -0.8
SH3D19-204ENST00000427414 GGA1Q9UJY5 639 aa10.04□□□□□ -0.8
SH3D19-204ENST00000427414 KIF3AQ9Y496 699 aa10.04□□□□□ -0.8
SH3D19-204ENST00000427414 WDR33Q9C0J8 1336 aaKnown RBP10.04□□□□□ -0.8
SH3D19-204ENST00000427414 FOXP2O15409 715 aa10.04□□□□□ -0.8
SH3D19-204ENST00000427414 IDH1O75874 414 aaKnown RBP10.04□□□□□ -0.8
SH3D19-204ENST00000427414 BRD1O95696 1058 aa10.04□□□□□ -0.8
SH3D19-204ENST00000427414 FGAP02671 866 aa10.04□□□□□ -0.8
SH3D19-204ENST00000427414 FOXD4L5Q5VV16 416 aaPredicted RBP10.04□□□□□ -0.8
SH3D19-204ENST00000427414 FOXD4L4Q8WXT5 416 aaPredicted RBP10.04□□□□□ -0.8
SH3D19-204ENST00000427414 TMEM87BQ96K49 555 aa10.04□□□□□ -0.8
SH3D19-204ENST00000427414 LRP2BPQ9P2M1 347 aa10.04□□□□□ -0.8
SH3D19-204ENST00000427414 ATP6V1DQ9Y5K8 247 aa10.04□□□□□ -0.8
SH3D19-204ENST00000427414 COL1A1P02452 1464 aaPredicted RBP10.04□□□□□ -0.8
SH3D19-204ENST00000427414 FGRP09769 529 aa10.03□□□□□ -0.8
SH3D19-204ENST00000427414 PPP4CP60510 307 aa10.03□□□□□ -0.8
SH3D19-204ENST00000427414 SF3B2Q13435 895 aaKnown RBP10.03□□□□□ -0.8
SH3D19-204ENST00000427414 MRIQ9BWK5 157 aa10.03□□□□□ -0.8
SH3D19-204ENST00000427414 KRT23Q9C075 422 aa10.03□□□□□ -0.8
SH3D19-204ENST00000427414 ATP8A2Q9NTI2 1148 aa10.03□□□□□ -0.8
SH3D19-204ENST00000427414 NSFL1CQ9UNZ2 370 aaKnown RBP10.03□□□□□ -0.8
SH3D19-204ENST00000427414 ZDHHC9Q9Y397 364 aa10.03□□□□□ -0.8
SH3D19-204ENST00000427414 PFKFB2O60825 505 aa10.03□□□□□ -0.8
SH3D19-204ENST00000427414 TOB2Q14106 344 aaPredicted RBP10.03□□□□□ -0.8
SH3D19-204ENST00000427414 PPP2R5BQ15173 497 aa10.03□□□□□ -0.8
SH3D19-204ENST00000427414 SBK1Q52WX2 424 aa10.03□□□□□ -0.8
SH3D19-204ENST00000427414 MAGEB6Q8N7X4 407 aa10.03□□□□□ -0.8
SH3D19-204ENST00000427414 STAG1Q8WVM7 1258 aa10.03□□□□□ -0.8
SH3D19-204ENST00000427414 UPF3BQ9BZI7 483 aaKnown RBP10.03□□□□□ -0.8
SH3D19-204ENST00000427414 COA1Q9GZY4 146 aa10.03□□□□□ -0.8
SH3D19-204ENST00000427414 PPEF1O14829 653 aaPredicted RBP10.02□□□□□ -0.8
SH3D19-204ENST00000427414 HMGN5P82970 282 aaKnown RBP10.02□□□□□ -0.8
SH3D19-204ENST00000427414 KIAA2012Q0VF49 1180 aa10.02□□□□□ -0.8
SH3D19-204ENST00000427414 TRDNQ13061 729 aa10.02□□□□□ -0.8
SH3D19-204ENST00000427414 CCDC129Q6ZRS4 1044 aa10.02□□□□□ -0.8
SH3D19-204ENST00000427414 TMTC2Q8N394 836 aa10.02□□□□□ -0.8
SH3D19-204ENST00000427414 EYA3Q99504 573 aa10.02□□□□□ -0.8
SH3D19-204ENST00000427414 RTFDC1Q9BY42 306 aaPredicted RBP10.02□□□□□ -0.8
SH3D19-204ENST00000427414 TMX4Q9H1E5 349 aaPredicted RBP10.02□□□□□ -0.8
SH3D19-204ENST00000427414 ZHX1Q9UKY1 873 aaPredicted RBP10.02□□□□□ -0.8
SH3D19-204ENST00000427414 WWC3Q9ULE0 1092 aa10.02□□□□□ -0.8
SH3D19-204ENST00000427414 FOCADQ5VW36 1801 aa10.02□□□□□ -0.81
SH3D19-204ENST00000427414 MAGEB6P1A0A0J9YX57 407 aa10.02□□□□□ -0.81
SH3D19-204ENST00000427414 PLCG2P16885 1265 aa10.02□□□□□ -0.81
SH3D19-204ENST00000427414 MB21D2Q8IYB1 491 aaPredicted RBP10.02□□□□□ -0.81
SH3D19-204ENST00000427414 IFNL3Q8IZI9 196 aa10.02□□□□□ -0.81
SH3D19-204ENST00000427414 CNKSR1Q969H4 720 aa10.02□□□□□ -0.81
SH3D19-204ENST00000427414 CCDC94Q9BW85 323 aaPredicted RBP10.02□□□□□ -0.81
SH3D19-204ENST00000427414 NDUFB9Q9Y6M9 179 aa10.02□□□□□ -0.81
SH3D19-204ENST00000427414 C10orf71Q711Q0 1435 aa10.02□□□□□ -0.81
SH3D19-204ENST00000427414 DHX16O60231 1041 aaKnown RBP10.01□□□□□ -0.81
SH3D19-204ENST00000427414 MBD3O95983 291 aa10.01□□□□□ -0.81
SH3D19-204ENST00000427414 GYG1P46976 350 aa10.01□□□□□ -0.81
SH3D19-204ENST00000427414 NAA16Q6N069 864 aaPredicted RBP10.01□□□□□ -0.81
SH3D19-204ENST00000427414 NSUN4Q96CB9 384 aaKnown RBP10.01□□□□□ -0.81
SH3D19-204ENST00000427414 RIOK1Q9BRS2 568 aaKnown RBP10.01□□□□□ -0.81
SH3D19-204ENST00000427414 ANKIB1Q9P2G1 1089 aa10.01□□□□□ -0.81
SH3D19-204ENST00000427414 GSG1L2A8MUP6 293 aa10.01□□□□□ -0.81
SH3D19-204ENST00000427414 LIFRP42702 1097 aa10.01□□□□□ -0.81
SH3D19-204ENST00000427414 MMP14P50281 582 aa10.01□□□□□ -0.81
SH3D19-204ENST00000427414 GPSM2P81274 684 aa10.01□□□□□ -0.81
SH3D19-204ENST00000427414 PI16Q6UXB8 463 aa10.01□□□□□ -0.81
SH3D19-204ENST00000427414 SUPT20HQ8NEM7 779 aa10.01□□□□□ -0.81
SH3D19-204ENST00000427414 GTF3C6Q969F1 213 aa10.01□□□□□ -0.81
SH3D19-204ENST00000427414 SMC3Q9UQE7 1217 aa10.01□□□□□ -0.81
SH3D19-204ENST00000427414 CYP7A1P22680 504 aa10□□□□□ -0.81
SH3D19-204ENST00000427414 CCDC178Q5BJE1 867 aa10□□□□□ -0.81
SH3D19-204ENST00000427414 RALYLQ86SE5 291 aaKnown RBP10□□□□□ -0.81
SH3D19-204ENST00000427414 SMARCC2Q8TAQ2 1214 aa10□□□□□ -0.81
SH3D19-204ENST00000427414 TBC1D16Q8TBP0 767 aa10□□□□□ -0.81
SH3D19-204ENST00000427414 TPCN1Q9ULQ1 816 aa10□□□□□ -0.81
SH3D19-204ENST00000427414 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10□□□□□ -0.81
SH3D19-204ENST00000427414 PSME4Q14997 1843 aa10□□□□□ -0.81
SH3D19-204ENST00000427414 DDX60LQ5H9U9 1706 aaKnown RBP10□□□□□ -0.81
SH3D19-204ENST00000427414 MMP10P09238 476 aa10□□□□□ -0.81
SH3D19-204ENST00000427414 ME3Q16798 604 aa10□□□□□ -0.81
SH3D19-204ENST00000427414 ATL3Q6DD88 541 aa10□□□□□ -0.81
SH3D19-204ENST00000427414 STOX1Q6ZVD7 989 aa10□□□□□ -0.81
SH3D19-204ENST00000427414 SGMS1Q86VZ5 419 aa10□□□□□ -0.81
SH3D19-204ENST00000427414 MPNDQ8N594 471 aa10□□□□□ -0.81
SH3D19-204ENST00000427414 MYRIPQ8NFW9 859 aa10□□□□□ -0.81
SH3D19-204ENST00000427414 CRNKL1Q9BZJ0 848 aaKnown RBP10□□□□□ -0.81
SH3D19-204ENST00000427414 NAPBQ9H115 298 aa10□□□□□ -0.81
SH3D19-204ENST00000427414 TSPY26PQ9H489 355 aa10□□□□□ -0.81
SH3D19-204ENST00000427414 CD209Q9NNX6 404 aa10□□□□□ -0.81
SH3D19-204ENST00000427414 ROBO3Q96MS0 1386 aa10□□□□□ -0.81
SH3D19-204ENST00000427414 MBD4O95243 580 aa10□□□□□ -0.81
SH3D19-204ENST00000427414 BAG3O95817 575 aa10□□□□□ -0.81
SH3D19-204ENST00000427414 AKNAD1Q5T1N1 836 aa10□□□□□ -0.81
SH3D19-204ENST00000427414 Q6ZUG5 572 aa10□□□□□ -0.81
SH3D19-204ENST00000427414 TMEM87AQ8NBN3 555 aa10□□□□□ -0.81
SH3D19-204ENST00000427414 RAI14Q9P0K7 980 aa10□□□□□ -0.81
SH3D19-204ENST00000427414 ARPP21Q9UBL0 812 aaPredicted RBP10□□□□□ -0.81
SH3D19-204ENST00000427414 SNED1Q8TER0 1413 aa9.99□□□□□ -0.81
SH3D19-204ENST00000427414 H0YIN7 160 aa9.99□□□□□ -0.81
SH3D19-204ENST00000427414 SLC3A2P08195 630 aaKnown RBP9.99□□□□□ -0.81
SH3D19-204ENST00000427414 HDLBPQ00341 1268 aaKnown RBP9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms