RNA–Protein interactions for RNA: ENST00000426542.6

ARHGEF28-203, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ARHGEF28, Length 6,118 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-203ENST00000426542 CALCOCO2Q13137 446 aa20.16■□□□□ 0.82
ARHGEF28-203ENST00000426542 MICALL1Q8N3F8 863 aa20.16■□□□□ 0.82
ARHGEF28-203ENST00000426542 EYA1Q99502 592 aa20.16■□□□□ 0.82
ARHGEF28-203ENST00000426542 BAG1Q99933 345 aaPredicted RBP20.16■□□□□ 0.82
ARHGEF28-203ENST00000426542 USP26Q9BXU7 913 aa20.16■□□□□ 0.82
ARHGEF28-203ENST00000426542 POLR3AO14802 1390 aaPredicted RBP20.16■□□□□ 0.82
ARHGEF28-203ENST00000426542 SMC5Q8IY18 1101 aa20.15■□□□□ 0.82
ARHGEF28-203ENST00000426542 CLCN1P35523 988 aa20.15■□□□□ 0.82
ARHGEF28-203ENST00000426542 MYL5Q02045 173 aa20.15■□□□□ 0.82
ARHGEF28-203ENST00000426542 INTS4Q96HW7 963 aaKnown RBP20.15■□□□□ 0.82
ARHGEF28-203ENST00000426542 GNPATO15228 680 aa20.15■□□□□ 0.82
ARHGEF28-203ENST00000426542 CCNT1O60563 726 aaKnown RBP20.15■□□□□ 0.82
ARHGEF28-203ENST00000426542 RPS6KB1P23443 525 aa20.15■□□□□ 0.82
ARHGEF28-203ENST00000426542 ARMT1Q9H993 441 aa20.15■□□□□ 0.82
ARHGEF28-203ENST00000426542 LEO1Q8WVC0 666 aaPredicted RBP20.15■□□□□ 0.82
ARHGEF28-203ENST00000426542 PLCD1P51178 756 aa20.15■□□□□ 0.82
ARHGEF28-203ENST00000426542 EIF6P56537 245 aaKnown RBP20.15■□□□□ 0.82
ARHGEF28-203ENST00000426542 PDE4DQ08499 809 aa20.15■□□□□ 0.82
ARHGEF28-203ENST00000426542 CFAP157Q5JU67 520 aa20.15■□□□□ 0.82
ARHGEF28-203ENST00000426542 AGTPBP1Q9UPW5 1226 aa20.15■□□□□ 0.82
ARHGEF28-203ENST00000426542 DUOX2Q9NRD8 1548 aa20.14■□□□□ 0.82
ARHGEF28-203ENST00000426542 TUBB4BP68371 445 aa20.14■□□□□ 0.82
ARHGEF28-203ENST00000426542 SEC62Q99442 399 aaKnown RBP20.14■□□□□ 0.82
ARHGEF28-203ENST00000426542 KRT9P35527 623 aa20.14■□□□□ 0.81
ARHGEF28-203ENST00000426542 SNX16P57768 344 aa20.14■□□□□ 0.81
ARHGEF28-203ENST00000426542 PIK3AP1Q6ZUJ8 805 aa20.14■□□□□ 0.81
ARHGEF28-203ENST00000426542 NBPF11Q86T75 865 aa20.14■□□□□ 0.81
ARHGEF28-203ENST00000426542 ZBTB40Q9NUA8 1239 aa20.14■□□□□ 0.81
ARHGEF28-203ENST00000426542 TRAPPC3LQ5T215 181 aa20.14■□□□□ 0.81
ARHGEF28-203ENST00000426542 KIFAP3Q92845 792 aa20.14■□□□□ 0.81
ARHGEF28-203ENST00000426542 SH2D4AQ9H788 454 aa20.14■□□□□ 0.81
ARHGEF28-203ENST00000426542 CCDC169A6NNP5 214 aa20.14■□□□□ 0.81
ARHGEF28-203ENST00000426542 ITGA6P23229 1130 aa20.14■□□□□ 0.81
ARHGEF28-203ENST00000426542 NPATQ14207 1427 aa20.14■□□□□ 0.81
ARHGEF28-203ENST00000426542 FCHSD1Q86WN1 690 aa20.14■□□□□ 0.81
ARHGEF28-203ENST00000426542 UFL1O94874 794 aa20.13■□□□□ 0.81
ARHGEF28-203ENST00000426542 HOXC9P31274 260 aa20.13■□□□□ 0.81
ARHGEF28-203ENST00000426542 UAP1Q16222 522 aaPredicted RBP20.13■□□□□ 0.81
ARHGEF28-203ENST00000426542 JAKMIP2Q96AA8 810 aa20.13■□□□□ 0.81
ARHGEF28-203ENST00000426542 PHACTR3Q96KR7 559 aa20.13■□□□□ 0.81
ARHGEF28-203ENST00000426542 FAM89AQ96GI7 184 aa20.13■□□□□ 0.81
ARHGEF28-203ENST00000426542 WDR70Q9NW82 654 aa20.13■□□□□ 0.81
ARHGEF28-203ENST00000426542 A0A1B0GUL7 405 aa20.13■□□□□ 0.81
ARHGEF28-203ENST00000426542 ATL3Q6DD88 541 aa20.13■□□□□ 0.81
ARHGEF28-203ENST00000426542 TNFAIP3P21580 790 aa20.13■□□□□ 0.81
ARHGEF28-203ENST00000426542 FMNL3Q8IVF7 1028 aa20.13■□□□□ 0.81
ARHGEF28-203ENST00000426542 TRIM7Q9C029 511 aa20.13■□□□□ 0.81
ARHGEF28-203ENST00000426542 VPS16Q9H269 839 aa20.13■□□□□ 0.81
ARHGEF28-203ENST00000426542 GJA3Q9Y6H8 435 aa20.13■□□□□ 0.81
ARHGEF28-203ENST00000426542 DEXIO95424 95 aa20.12■□□□□ 0.81
ARHGEF28-203ENST00000426542 DAAM2Q86T65 1068 aa20.12■□□□□ 0.81
ARHGEF28-203ENST00000426542 SAMD15Q9P1V8 674 aa20.12■□□□□ 0.81
ARHGEF28-203ENST00000426542 RASA3Q14644 834 aa20.12■□□□□ 0.81
ARHGEF28-203ENST00000426542 CFAP57Q96MR6 1250 aa20.12■□□□□ 0.81
ARHGEF28-203ENST00000426542 TIMM10P62072 90 aa20.12■□□□□ 0.81
ARHGEF28-203ENST00000426542 FAM160A1Q05DH4 1040 aa20.12■□□□□ 0.81
ARHGEF28-203ENST00000426542 GPATCH8Q9UKJ3 1502 aaKnown RBP20.12■□□□□ 0.81
ARHGEF28-203ENST00000426542 TPD52P55327 224 aaPredicted RBP20.12■□□□□ 0.81
ARHGEF28-203ENST00000426542 SBDSQ9Y3A5 250 aaKnown RBP eCLIP20.12■□□□□ 0.81
ARHGEF28-203ENST00000426542 SLC27A2O14975 620 aa20.11■□□□□ 0.81
ARHGEF28-203ENST00000426542 GAS8O95995 478 aa20.11■□□□□ 0.81
ARHGEF28-203ENST00000426542 CCDC26Q8TAB7 109 aa20.11■□□□□ 0.81
ARHGEF28-203ENST00000426542 EBAG9O00559 213 aa20.11■□□□□ 0.81
ARHGEF28-203ENST00000426542 SPOPO43791 374 aa20.11■□□□□ 0.81
ARHGEF28-203ENST00000426542 STX10O60499 249 aa20.11■□□□□ 0.81
ARHGEF28-203ENST00000426542 GCP02774 474 aa20.11■□□□□ 0.81
ARHGEF28-203ENST00000426542 CNNM4Q6P4Q7 775 aa20.11■□□□□ 0.81
ARHGEF28-203ENST00000426542 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.11■□□□□ 0.81
ARHGEF28-203ENST00000426542 ALDH3A1P30838 453 aa20.11■□□□□ 0.81
ARHGEF28-203ENST00000426542 HIBADHP31937 336 aaKnown RBP20.11■□□□□ 0.81
ARHGEF28-203ENST00000426542 TBC1D8BQ0IIM8 1120 aa20.11■□□□□ 0.81
ARHGEF28-203ENST00000426542 INF2Q27J81 1249 aa20.11■□□□□ 0.81
ARHGEF28-203ENST00000426542 TNNI3KQ59H18 835 aa20.11■□□□□ 0.81
ARHGEF28-203ENST00000426542 PROCA1Q8NCQ7 364 aaPredicted RBP20.11■□□□□ 0.81
ARHGEF28-203ENST00000426542 SMC1BQ8NDV3 1235 aa20.11■□□□□ 0.81
ARHGEF28-203ENST00000426542 FPGT-TNNI3KV9GXZ4 949 aa20.11■□□□□ 0.81
ARHGEF28-203ENST00000426542 SMTNP53814 917 aa20.11■□□□□ 0.81
ARHGEF28-203ENST00000426542 PUM3Q15397 648 aaKnown RBP20.11■□□□□ 0.81
ARHGEF28-203ENST00000426542 CCDC117Q8IWD4 279 aaPredicted RBP20.11■□□□□ 0.81
ARHGEF28-203ENST00000426542 IGSF22Q8N9C0 903 aa20.11■□□□□ 0.81
ARHGEF28-203ENST00000426542 CNBD1Q8NA66 436 aa20.11■□□□□ 0.81
ARHGEF28-203ENST00000426542 CALUO43852 315 aaPredicted RBP20.1■□□□□ 0.81
ARHGEF28-203ENST00000426542 SETDB1Q15047 1291 aa20.1■□□□□ 0.81
ARHGEF28-203ENST00000426542 RILPL1Q5EBL4 403 aa20.1■□□□□ 0.81
ARHGEF28-203ENST00000426542 PRAG1Q86YV5 1406 aa20.1■□□□□ 0.81
ARHGEF28-203ENST00000426542 PPP1R21Q6ZMI0 780 aa20.1■□□□□ 0.81
ARHGEF28-203ENST00000426542 FAM76AQ8TAV0 307 aa20.1■□□□□ 0.81
ARHGEF28-203ENST00000426542 KIFC2Q96AC6 838 aa20.1■□□□□ 0.81
ARHGEF28-203ENST00000426542 NUP160Q12769 1436 aa20.1■□□□□ 0.81
ARHGEF28-203ENST00000426542 PARD3Q8TEW0 1356 aa20.1■□□□□ 0.81
ARHGEF28-203ENST00000426542 ZFYVE9O95405 1425 aa20.1■□□□□ 0.81
ARHGEF28-203ENST00000426542 PPP1R2P41236 205 aa20.1■□□□□ 0.81
ARHGEF28-203ENST00000426542 SH3BP5O60239 455 aa20.1■□□□□ 0.81
ARHGEF28-203ENST00000426542 TMEM87BQ96K49 555 aa20.1■□□□□ 0.81
ARHGEF28-203ENST00000426542 PICK1Q9NRD5 415 aa20.1■□□□□ 0.81
ARHGEF28-203ENST00000426542 CEP57Q86XR8 500 aa20.1■□□□□ 0.81
ARHGEF28-203ENST00000426542 PODXL2Q9NZ53 605 aa20.1■□□□□ 0.81
ARHGEF28-203ENST00000426542 MAPK8IP1Q9UQF2 711 aa20.1■□□□□ 0.81
ARHGEF28-203ENST00000426542 A2MP01023 1474 aa20.1■□□□□ 0.81
ARHGEF28-203ENST00000426542 PPP2R3AQ06190 1150 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms